RNA–Protein interactions for RNA: ENST00000547672.5

PTCH1-215, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 881 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-215ENST00000547672 FCGR2BP31994 310 aaPredicted RBP10.62□□□□□ -0.71
PTCH1-215ENST00000547672 CRIP2P52943 208 aaPredicted RBP10.62□□□□□ -0.71
PTCH1-215ENST00000547672 YPEL3P61236 119 aaPredicted RBP10.62□□□□□ -0.71
PTCH1-215ENST00000547672 C9orf139Q6ZV77 190 aa10.62□□□□□ -0.71
PTCH1-215ENST00000547672 SSX7Q7RTT5 188 aa10.62□□□□□ -0.71
PTCH1-215ENST00000547672 CLRN3Q8NCR9 226 aa10.62□□□□□ -0.71
PTCH1-215ENST00000547672 OR51G1Q8NGK1 321 aa10.62□□□□□ -0.71
PTCH1-215ENST00000547672 IGKV1D-37A0A075B6S9 117 aa10.61□□□□□ -0.71
PTCH1-215ENST00000547672 IGHV3OR16-10A0A075B7F0 116 aa10.61□□□□□ -0.71
PTCH1-215ENST00000547672 K7EIM0 57 aa10.61□□□□□ -0.71
PTCH1-215ENST00000547672 HMGB3O15347 200 aaKnown RBP10.61□□□□□ -0.71
PTCH1-215ENST00000547672 PAGE4O60829 102 aa10.61□□□□□ -0.71
PTCH1-215ENST00000547672 ADCYAP1P18509 176 aa10.61□□□□□ -0.71
PTCH1-215ENST00000547672 PAX6P26367 422 aa10.61□□□□□ -0.71
PTCH1-215ENST00000547672 GCSAMLQ5JQS6 135 aa10.61□□□□□ -0.71
PTCH1-215ENST00000547672 CST9LP1Q5W188 147 aa10.61□□□□□ -0.71
PTCH1-215ENST00000547672 NECAP1Q8NC96 275 aa10.61□□□□□ -0.71
PTCH1-215ENST00000547672 PIFOQ8TCI5 191 aa10.61□□□□□ -0.71
PTCH1-215ENST00000547672 Q8WTZ3 238 aa10.61□□□□□ -0.71
PTCH1-215ENST00000547672 TVP23CQ96ET8 276 aa10.61□□□□□ -0.71
PTCH1-215ENST00000547672 SEPSECSQ9HD40 501 aaKnown RBP10.61□□□□□ -0.71
PTCH1-215ENST00000547672 C21orf62Q9NYP8 219 aa10.61□□□□□ -0.71
PTCH1-215ENST00000547672 C11orf94C9JXX5 98 aa10.6□□□□□ -0.71
PTCH1-215ENST00000547672 H3BUA1 57 aa10.6□□□□□ -0.71
PTCH1-215ENST00000547672 H3BUX3 64 aa10.6□□□□□ -0.71
PTCH1-215ENST00000547672 M0R036 132 aa10.6□□□□□ -0.71
PTCH1-215ENST00000547672 BRI3O95415 125 aa10.6□□□□□ -0.71
PTCH1-215ENST00000547672 IGLC1P0CG04 106 aa10.6□□□□□ -0.71
PTCH1-215ENST00000547672 EGR2P11161 476 aaPredicted RBP10.6□□□□□ -0.71
PTCH1-215ENST00000547672 GUCA2BQ16661 112 aa10.6□□□□□ -0.71
PTCH1-215ENST00000547672 KLF17Q5JT82 389 aaPredicted RBP10.6□□□□□ -0.71
PTCH1-215ENST00000547672 CYB561D1Q8N8Q1 229 aa10.6□□□□□ -0.71
PTCH1-215ENST00000547672 OR5T1Q8NG75 326 aa10.6□□□□□ -0.71
PTCH1-215ENST00000547672 OR4F5Q8NH21 305 aa10.6□□□□□ -0.71
PTCH1-215ENST00000547672 RPUSD4Q96CM3 377 aaKnown RBP10.6□□□□□ -0.71
PTCH1-215ENST00000547672 OR4F4Q96R69 305 aa10.6□□□□□ -0.71
PTCH1-215ENST00000547672 FOXC2Q99958 501 aa10.6□□□□□ -0.71
PTCH1-215ENST00000547672 TCEAL7Q9BRU2 100 aa10.6□□□□□ -0.71
PTCH1-215ENST00000547672 FAM103A1Q9BTL3 118 aaKnown RBP10.6□□□□□ -0.71
PTCH1-215ENST00000547672 FBXL7Q9UJT9 491 aa10.6□□□□□ -0.71
PTCH1-215ENST00000547672 SPG11Q96JI7 2443 aa10.6□□□□□ -0.71
PTCH1-215ENST00000547672 COL12A1Q99715 3063 aa10.59□□□□□ -0.71
PTCH1-215ENST00000547672 TRBV7-1A0A0A6YYK4 115 aa10.59□□□□□ -0.71
PTCH1-215ENST00000547672 A0A1W2PRE2 83 aa10.59□□□□□ -0.71
PTCH1-215ENST00000547672 CYSRT1A8MQ03 144 aa10.59□□□□□ -0.71
PTCH1-215ENST00000547672 ZNF727A8MUV8 499 aa10.59□□□□□ -0.71
PTCH1-215ENST00000547672 H3BQ15 152 aa10.59□□□□□ -0.71
PTCH1-215ENST00000547672 OR7C2O60412 319 aa10.59□□□□□ -0.71
PTCH1-215ENST00000547672 TOMM40O96008 361 aa10.59□□□□□ -0.71
PTCH1-215ENST00000547672 IGF1P05019 195 aa10.59□□□□□ -0.71
PTCH1-215ENST00000547672 CEBPGP53567 150 aa10.59□□□□□ -0.71
PTCH1-215ENST00000547672 ZNF90Q03938 601 aa10.59□□□□□ -0.71
PTCH1-215ENST00000547672 BTN1A1Q13410 526 aa10.59□□□□□ -0.71
PTCH1-215ENST00000547672 TMEM241Q24JQ0 296 aa10.59□□□□□ -0.71
PTCH1-215ENST00000547672 FAM209BQ5JX69 171 aa10.59□□□□□ -0.71
PTCH1-215ENST00000547672 ASPHD1Q5U4P2 390 aa10.59□□□□□ -0.71
PTCH1-215ENST00000547672 FANCD2OSQ96PS1 177 aa10.59□□□□□ -0.71
PTCH1-215ENST00000547672 TMPRSS5Q9H3S3 457 aa10.59□□□□□ -0.71
PTCH1-215ENST00000547672 SMCO4Q9NRQ5 59 aa10.59□□□□□ -0.71
PTCH1-215ENST00000547672 ZNF355PQ9NSJ1 428 aa10.59□□□□□ -0.71
PTCH1-215ENST00000547672 ZNF580Q9UK33 172 aa10.59□□□□□ -0.71
PTCH1-215ENST00000547672 HIGD1AQ9Y241 93 aa10.59□□□□□ -0.71
PTCH1-215ENST00000547672 PUS1Q9Y606 427 aaKnown RBP eCLIP10.59□□□□□ -0.71
PTCH1-215ENST00000547672 TRAV41A0A0B4J266 112 aa10.58□□□□□ -0.72
PTCH1-215ENST00000547672 PSMB11A5LHX3 300 aa10.58□□□□□ -0.72
PTCH1-215ENST00000547672 FAM223BA6NKX1 122 aa10.58□□□□□ -0.72
PTCH1-215ENST00000547672 ATP6V0E1O15342 81 aa10.58□□□□□ -0.72
PTCH1-215ENST00000547672 NUPL2O15504 423 aaKnown RBP10.58□□□□□ -0.72
PTCH1-215ENST00000547672 IGHV3-48P01763 117 aa10.58□□□□□ -0.72
PTCH1-215ENST00000547672 IGHG2P01859 326 aa10.58□□□□□ -0.72
PTCH1-215ENST00000547672 ORM2P19652 201 aa10.58□□□□□ -0.72
PTCH1-215ENST00000547672 GATA2P23769 480 aaPredicted RBP10.58□□□□□ -0.72
PTCH1-215ENST00000547672 CD81P60033 236 aa10.58□□□□□ -0.72
PTCH1-215ENST00000547672 SCGB2A2Q13296 93 aa10.58□□□□□ -0.72
PTCH1-215ENST00000547672 Q56UQ5 140 aa10.58□□□□□ -0.72
PTCH1-215ENST00000547672 MIR17HGQ75NE6 70 aa10.58□□□□□ -0.72
PTCH1-215ENST00000547672 LINC00305Q7Z4B0 112 aa10.58□□□□□ -0.72
PTCH1-215ENST00000547672 FAM223AQ8IWN6 122 aa10.58□□□□□ -0.72
PTCH1-215ENST00000547672 OR1B1Q8NGR6 318 aa10.58□□□□□ -0.72
PTCH1-215ENST00000547672 TMEM37Q8WXS4 190 aa10.58□□□□□ -0.72
PTCH1-215ENST00000547672 EEF1AKMT3Q96AZ1 226 aa10.58□□□□□ -0.72
PTCH1-215ENST00000547672 PAXXQ9BUH6 204 aa10.58□□□□□ -0.72
PTCH1-215ENST00000547672 OR51M1Q9H341 326 aa10.58□□□□□ -0.72
PTCH1-215ENST00000547672 TUBA4BQ9H853 241 aa10.58□□□□□ -0.72
PTCH1-215ENST00000547672 NAT8Q9UHE5 227 aa10.58□□□□□ -0.72
PTCH1-215ENST00000547672 DMRT1Q9Y5R6 373 aa10.58□□□□□ -0.72
PTCH1-215ENST00000547672 ANKRD17O75179 2603 aaKnown RBP10.58□□□□□ -0.72
PTCH1-215ENST00000547672 MED13LQ71F56 2210 aa10.58□□□□□ -0.72
PTCH1-215ENST00000547672 PLXNB1O43157 2135 aa10.57□□□□□ -0.72
PTCH1-215ENST00000547672 USP9YO00507 2555 aaPredicted RBP10.57□□□□□ -0.72
PTCH1-215ENST00000547672 A0A087WWC5 75 aa10.57□□□□□ -0.72
PTCH1-215ENST00000547672 TRBV9A0A0B4J1U6 114 aa10.57□□□□□ -0.72
PTCH1-215ENST00000547672 AP4M1O00189 453 aa10.57□□□□□ -0.72
PTCH1-215ENST00000547672 AVPP01185 164 aa10.57□□□□□ -0.72
PTCH1-215ENST00000547672 PSG1P11464 419 aa10.57□□□□□ -0.72
PTCH1-215ENST00000547672 NDPQ00604 133 aa10.57□□□□□ -0.72
PTCH1-215ENST00000547672 ATP5G2Q06055 141 aa10.57□□□□□ -0.72
PTCH1-215ENST00000547672 ECSCRQ19T08 205 aa10.57□□□□□ -0.72
PTCH1-215ENST00000547672 TMEM219Q86XT9 240 aa10.57□□□□□ -0.72
PTCH1-215ENST00000547672 USMG5Q96IX5 58 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms