RNA–Protein interactions for RNA: ENST00000546534.1

SCAF11-208, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 3

Gene SCAF11, Length 705 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-208ENST00000546534 PMP2P02689 132 aa8.98□□□□□ -0.97
SCAF11-208ENST00000546534 HLA-DRB4P13762 266 aa8.98□□□□□ -0.97
SCAF11-208ENST00000546534 AP2S1P53680 142 aaPredicted RBP8.98□□□□□ -0.97
SCAF11-208ENST00000546534 TIGITQ495A1 244 aa8.98□□□□□ -0.97
SCAF11-208ENST00000546534 PHLDA2Q53GA4 152 aa8.98□□□□□ -0.97
SCAF11-208ENST00000546534 OR4X1Q8NH49 305 aa8.98□□□□□ -0.97
SCAF11-208ENST00000546534 ZNRF2Q8NHG8 242 aa8.98□□□□□ -0.97
SCAF11-208ENST00000546534 MRGPRFQ96AM1 343 aa8.98□□□□□ -0.97
SCAF11-208ENST00000546534 FAM212BQ9NTI7 297 aaPredicted RBP8.98□□□□□ -0.97
SCAF11-208ENST00000546534 HLA-DRB4X5D2U9 266 aa8.98□□□□□ -0.97
SCAF11-208ENST00000546534 A0A0A6YYH2 397 aa8.97□□□□□ -0.97
SCAF11-208ENST00000546534 A6NJ64 397 aa8.97□□□□□ -0.97
SCAF11-208ENST00000546534 CLEC2LP0C7M8 214 aa8.97□□□□□ -0.97
SCAF11-208ENST00000546534 RNASE2P10153 161 aaKnown RBP8.97□□□□□ -0.97
SCAF11-208ENST00000546534 AQP4P55087 323 aa8.97□□□□□ -0.97
SCAF11-208ENST00000546534 DEFB1P60022 68 aa8.97□□□□□ -0.97
SCAF11-208ENST00000546534 LCE3BQ5TA77 95 aa8.97□□□□□ -0.97
SCAF11-208ENST00000546534 GDF5OSQ5U4N7 250 aa8.97□□□□□ -0.97
SCAF11-208ENST00000546534 C15orf53Q8NAA6 179 aa8.97□□□□□ -0.97
SCAF11-208ENST00000546534 SEPSECSQ9HD40 501 aaKnown RBP8.97□□□□□ -0.97
SCAF11-208ENST00000546534 NRN1Q9NPD7 142 aa8.97□□□□□ -0.97
SCAF11-208ENST00000546534 IFT46Q9NQC8 304 aa8.97□□□□□ -0.97
SCAF11-208ENST00000546534 DIABLOQ9NR28 239 aa8.97□□□□□ -0.97
SCAF11-208ENST00000546534 YTHDF2Q9Y5A9 579 aaKnown RBP8.97□□□□□ -0.97
SCAF11-208ENST00000546534 EPM2AB3EWF7 344 aa8.96□□□□□ -0.98
SCAF11-208ENST00000546534 INS-IGF2F8WCM5 200 aa8.96□□□□□ -0.98
SCAF11-208ENST00000546534 CORTO00230 105 aa8.96□□□□□ -0.98
SCAF11-208ENST00000546534 HNRNPCP07910 306 aaKnown RBP eCLIP8.96□□□□□ -0.98
SCAF11-208ENST00000546534 OPRK1P41145 380 aa8.96□□□□□ -0.98
SCAF11-208ENST00000546534 NKX2-1P43699 371 aaPredicted RBP8.96□□□□□ -0.98
SCAF11-208ENST00000546534 SCAND1P57086 179 aa8.96□□□□□ -0.98
SCAF11-208ENST00000546534 DAD1P61803 113 aa8.96□□□□□ -0.98
SCAF11-208ENST00000546534 TBC1D26Q86UD7 250 aa8.96□□□□□ -0.98
SCAF11-208ENST00000546534 SLC35G3Q8N808 338 aa8.96□□□□□ -0.98
SCAF11-208ENST00000546534 OR6F1Q8NGZ6 308 aa8.96□□□□□ -0.98
SCAF11-208ENST00000546534 LOC102723971A0A1B0GUV8 181 aa8.95□□□□□ -0.98
SCAF11-208ENST00000546534 SCGB2A1O75556 95 aa8.95□□□□□ -0.98
SCAF11-208ENST00000546534 INAFM2P0DMQ5 153 aa8.95□□□□□ -0.98
SCAF11-208ENST00000546534 SDC2P34741 201 aa8.95□□□□□ -0.98
SCAF11-208ENST00000546534 SUB1P53999 127 aaKnown RBP eCLIP8.95□□□□□ -0.98
SCAF11-208ENST00000546534 KRTAP10-2P60368 255 aa8.95□□□□□ -0.98
SCAF11-208ENST00000546534 MXD1Q05195 221 aa8.95□□□□□ -0.98
SCAF11-208ENST00000546534 IDNKQ5T6J7 187 aa8.95□□□□□ -0.98
SCAF11-208ENST00000546534 C1orf158Q8N1D5 194 aa8.95□□□□□ -0.98
SCAF11-208ENST00000546534 ZNF709Q8N972 641 aa8.95□□□□□ -0.98
SCAF11-208ENST00000546534 OR5H2Q8NGV7 314 aa8.95□□□□□ -0.98
SCAF11-208ENST00000546534 ANAPC10Q9UM13 185 aa8.95□□□□□ -0.98
SCAF11-208ENST00000546534 TRAV30A0A087WSZ9 112 aa8.94□□□□□ -0.98
SCAF11-208ENST00000546534 A0A0B4J293 547 aa8.94□□□□□ -0.98
SCAF11-208ENST00000546534 HBE1P02100 147 aa8.94□□□□□ -0.98
SCAF11-208ENST00000546534 S100GP29377 79 aa8.94□□□□□ -0.98
SCAF11-208ENST00000546534 ETV6P41212 452 aa8.94□□□□□ -0.98
SCAF11-208ENST00000546534 RPL5P46777 297 aaKnown RBP8.94□□□□□ -0.98
SCAF11-208ENST00000546534 TAS2R46P59540 309 aa8.94□□□□□ -0.98
SCAF11-208ENST00000546534 DHODHQ02127 395 aa8.94□□□□□ -0.98
SCAF11-208ENST00000546534 USF2Q15853 346 aaPredicted RBP8.94□□□□□ -0.98
SCAF11-208ENST00000546534 GSG1LQ6UXU4 331 aa8.94□□□□□ -0.98
SCAF11-208ENST00000546534 SIGLEC15Q6ZMC9 328 aa8.94□□□□□ -0.98
SCAF11-208ENST00000546534 Q8WTZ3 238 aa8.94□□□□□ -0.98
SCAF11-208ENST00000546534 SLC35B3Q9H1N7 401 aa8.94□□□□□ -0.98
SCAF11-208ENST00000546534 EBAG9O00559 213 aa8.93□□□□□ -0.98
SCAF11-208ENST00000546534 IGKV1-5P01602 117 aa8.93□□□□□ -0.98
SCAF11-208ENST00000546534 IGLC1P0CG04 106 aa8.93□□□□□ -0.98
SCAF11-208ENST00000546534 NAT1P18440 290 aa8.93□□□□□ -0.98
SCAF11-208ENST00000546534 HOXA1P49639 335 aaPredicted RBP8.93□□□□□ -0.98
SCAF11-208ENST00000546534 LPCAT3Q6P1A2 487 aa8.93□□□□□ -0.98
SCAF11-208ENST00000546534 LYSMD2Q8IV50 215 aa8.93□□□□□ -0.98
SCAF11-208ENST00000546534 OR4B1Q8NGF8 309 aa8.93□□□□□ -0.98
SCAF11-208ENST00000546534 SAV1Q9H4B6 383 aaPredicted RBP8.93□□□□□ -0.98
SCAF11-208ENST00000546534 SSR3Q9UNL2 185 aa8.93□□□□□ -0.98
SCAF11-208ENST00000546534 GOLT1BQ9Y3E0 138 aa8.93□□□□□ -0.98
SCAF11-208ENST00000546534 RPS10-NUDT3A0A1W2PQS6 291 aa8.92□□□□□ -0.98
SCAF11-208ENST00000546534 BUB3O43684 328 aa8.92□□□□□ -0.98
SCAF11-208ENST00000546534 NUDT3O95989 172 aa8.92□□□□□ -0.98
SCAF11-208ENST00000546534 IL4P05112 153 aa8.92□□□□□ -0.98
SCAF11-208ENST00000546534 P0C879 139 aa8.92□□□□□ -0.98
SCAF11-208ENST00000546534 HRH1P35367 487 aa8.92□□□□□ -0.98
SCAF11-208ENST00000546534 RND2P52198 227 aa8.92□□□□□ -0.98
SCAF11-208ENST00000546534 TAS2R20P59543 309 aa8.92□□□□□ -0.98
SCAF11-208ENST00000546534 YPEL3P61236 119 aaPredicted RBP8.92□□□□□ -0.98
SCAF11-208ENST00000546534 RRN3P1Q2M238 152 aa8.92□□□□□ -0.98
SCAF11-208ENST00000546534 BSXQ3C1V8 233 aa8.92□□□□□ -0.98
SCAF11-208ENST00000546534 FOXI2Q6ZQN5 318 aa8.92□□□□□ -0.98
SCAF11-208ENST00000546534 OR1S2Q8NGQ3 325 aa8.92□□□□□ -0.98
SCAF11-208ENST00000546534 NRG4Q8WWG1 115 aa8.92□□□□□ -0.98
SCAF11-208ENST00000546534 LINC00052Q96N35 136 aa8.92□□□□□ -0.98
SCAF11-208ENST00000546534 CLUHP3Q96NS8 147 aa8.92□□□□□ -0.98
SCAF11-208ENST00000546534 C7orf50Q9BRJ6 194 aaKnown RBP8.92□□□□□ -0.98
SCAF11-208ENST00000546534 AP5S1Q9NUS5 200 aa8.92□□□□□ -0.98
SCAF11-208ENST00000546534 LINC00588Q9Y4M8 146 aa8.92□□□□□ -0.98
SCAF11-208ENST00000546534 PSMB9P28065 219 aa8.91□□□□□ -0.98
SCAF11-208ENST00000546534 HLA-DMAP28067 261 aa8.91□□□□□ -0.98
SCAF11-208ENST00000546534 OR10J1P30954 320 aa8.91□□□□□ -0.98
SCAF11-208ENST00000546534 ALDH3B2P48448 385 aa8.91□□□□□ -0.98
SCAF11-208ENST00000546534 CCL18P55774 89 aa8.91□□□□□ -0.98
SCAF11-208ENST00000546534 ZNF79Q15937 498 aa8.91□□□□□ -0.98
SCAF11-208ENST00000546534 PRSS54Q6PEW0 395 aa8.91□□□□□ -0.98
SCAF11-208ENST00000546534 ENY2Q9NPA8 101 aa8.91□□□□□ -0.98
SCAF11-208ENST00000546534 BLOC1S6Q9UL45 172 aa8.91□□□□□ -0.98
SCAF11-208ENST00000546534 HSPA13P48723 471 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms