RNA–Protein interactions for RNA: ENST00000542841.1

SRGAP1-205, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 2

Gene SRGAP1, Length 836 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-205ENST00000542841 TSSC4Q9Y5U2 329 aaPredicted RBP9.02□□□□□ -0.97
SRGAP1-205ENST00000542841 TCRBV4S1A1TA0A5B7 111 aa9.01□□□□□ -0.97
SRGAP1-205ENST00000542841 IGHG2P01859 326 aa9.01□□□□□ -0.97
SRGAP1-205ENST00000542841 MBP02144 154 aa9.01□□□□□ -0.97
SRGAP1-205ENST00000542841 NMBP08949 121 aa9.01□□□□□ -0.97
SRGAP1-205ENST00000542841 OPRK1P41145 380 aa9.01□□□□□ -0.97
SRGAP1-205ENST00000542841 BLCAPP62952 87 aa9.01□□□□□ -0.97
SRGAP1-205ENST00000542841 NDPQ00604 133 aa9.01□□□□□ -0.97
SRGAP1-205ENST00000542841 AKIRIN2Q53H80 203 aa9.01□□□□□ -0.97
SRGAP1-205ENST00000542841 BTNL8Q6UX41 500 aa9.01□□□□□ -0.97
SRGAP1-205ENST00000542841 SLC16A13Q7RTY0 426 aa9.01□□□□□ -0.97
SRGAP1-205ENST00000542841 NPCDR1Q9BY65 106 aa9.01□□□□□ -0.97
SRGAP1-205ENST00000542841 U3KQK5 164 aa9.01□□□□□ -0.97
SRGAP1-205ENST00000542841 SMCO3A2RU48 225 aa9□□□□□ -0.97
SRGAP1-205ENST00000542841 LINC00862A6NCI5 91 aa9□□□□□ -0.97
SRGAP1-205ENST00000542841 NUDT19A8MXV4 375 aa9□□□□□ -0.97
SRGAP1-205ENST00000542841 BRI3O95415 125 aa9□□□□□ -0.97
SRGAP1-205ENST00000542841 AMY1AP04745 511 aa9□□□□□ -0.97
SRGAP1-205ENST00000542841 IGF1P05019 195 aa9□□□□□ -0.97
SRGAP1-205ENST00000542841 EGR2P11161 476 aaPredicted RBP9□□□□□ -0.97
SRGAP1-205ENST00000542841 DEFA4P12838 97 aa9□□□□□ -0.97
SRGAP1-205ENST00000542841 AKR1C1Q04828 323 aa9□□□□□ -0.97
SRGAP1-205ENST00000542841 TMEM95Q3KNT9 176 aa9□□□□□ -0.97
SRGAP1-205ENST00000542841 AKR1C8PQ5T2L2 129 aa9□□□□□ -0.97
SRGAP1-205ENST00000542841 ASPHD1Q5U4P2 390 aa9□□□□□ -0.97
SRGAP1-205ENST00000542841 Q6ZS46 218 aa9□□□□□ -0.97
SRGAP1-205ENST00000542841 HSPB9Q9BQS6 159 aa9□□□□□ -0.97
SRGAP1-205ENST00000542841 PARP11Q9NR21 331 aa9□□□□□ -0.97
SRGAP1-205ENST00000542841 EPPK1P58107 5090 aaKnown RBP9□□□□□ -0.97
SRGAP1-205ENST00000542841 IGLV11-55A0A075B6I3 123 aa8.99□□□□□ -0.97
SRGAP1-205ENST00000542841 H3BUA1 57 aa8.99□□□□□ -0.97
SRGAP1-205ENST00000542841 ATP6V0E1O15342 81 aa8.99□□□□□ -0.97
SRGAP1-205ENST00000542841 REG1AP05451 166 aa8.99□□□□□ -0.97
SRGAP1-205ENST00000542841 RPL29P47914 159 aaKnown RBP8.99□□□□□ -0.97
SRGAP1-205ENST00000542841 RUNX1Q01196 453 aa8.99□□□□□ -0.97
SRGAP1-205ENST00000542841 GAMTQ14353 236 aa8.99□□□□□ -0.97
SRGAP1-205ENST00000542841 FAM74A1Q5RGS3 127 aa8.99□□□□□ -0.97
SRGAP1-205ENST00000542841 THAP8Q8NA92 274 aa8.99□□□□□ -0.97
SRGAP1-205ENST00000542841 TMEM116Q8NCL8 245 aa8.99□□□□□ -0.97
SRGAP1-205ENST00000542841 LFNGQ8NES3 379 aa8.99□□□□□ -0.97
SRGAP1-205ENST00000542841 FAM103A1Q9BTL3 118 aaKnown RBP8.99□□□□□ -0.97
SRGAP1-205ENST00000542841 RSG1Q9BU20 258 aa8.99□□□□□ -0.97
SRGAP1-205ENST00000542841 SH3BGRL3Q9H299 93 aa8.99□□□□□ -0.97
SRGAP1-205ENST00000542841 ZNF705EA8MWA4 302 aaPredicted RBP8.98□□□□□ -0.97
SRGAP1-205ENST00000542841 I3L2K1 104 aa8.98□□□□□ -0.97
SRGAP1-205ENST00000542841 AP4M1O00189 453 aa8.98□□□□□ -0.97
SRGAP1-205ENST00000542841 PRH1P02810 166 aa8.98□□□□□ -0.97
SRGAP1-205ENST00000542841 CAMLGP49069 296 aa8.98□□□□□ -0.97
SRGAP1-205ENST00000542841 MFAP2P55001 183 aa8.98□□□□□ -0.97
SRGAP1-205ENST00000542841 SELENOTP62341 195 aa8.98□□□□□ -0.97
SRGAP1-205ENST00000542841 TMEM41BQ5BJD5 291 aa8.98□□□□□ -0.97
SRGAP1-205ENST00000542841 C19orf54Q5BKX5 351 aa8.98□□□□□ -0.97
SRGAP1-205ENST00000542841 TCTEX1D4Q5JR98 221 aa8.98□□□□□ -0.97
SRGAP1-205ENST00000542841 KHDC1LQ5JSQ8 128 aa8.98□□□□□ -0.97
SRGAP1-205ENST00000542841 UNQ5815/PRO19632Q6UWF5 114 aa8.98□□□□□ -0.97
SRGAP1-205ENST00000542841 TMEM182Q6ZP80 229 aaPredicted RBP8.98□□□□□ -0.97
SRGAP1-205ENST00000542841 SLC35E3Q7Z769 313 aa8.98□□□□□ -0.97
SRGAP1-205ENST00000542841 OR4X2Q8NGF9 303 aa8.98□□□□□ -0.97
SRGAP1-205ENST00000542841 MISP3Q96FF7 219 aa8.98□□□□□ -0.97
SRGAP1-205ENST00000542841 ATP6V0BQ99437 205 aa8.98□□□□□ -0.97
SRGAP1-205ENST00000542841 MGST2Q99735 147 aa8.98□□□□□ -0.97
SRGAP1-205ENST00000542841 GGTLC1Q9BX51 225 aa8.98□□□□□ -0.97
SRGAP1-205ENST00000542841 FNDC4Q9H6D8 234 aaPredicted RBP8.98□□□□□ -0.97
SRGAP1-205ENST00000542841 ZMAT5Q9UDW3 170 aaKnown RBP8.98□□□□□ -0.97
SRGAP1-205ENST00000542841 PFDN2Q9UHV9 154 aa8.98□□□□□ -0.97
SRGAP1-205ENST00000542841 RYR2Q92736 4967 aa8.98□□□□□ -0.97
SRGAP1-205ENST00000542841 BIRC6Q9NR09 4857 aa8.97□□□□□ -0.97
SRGAP1-205ENST00000542841 TRAV30A0A087WSZ9 112 aa8.97□□□□□ -0.97
SRGAP1-205ENST00000542841 TRAV41A0A0B4J266 112 aa8.97□□□□□ -0.97
SRGAP1-205ENST00000542841 TEX46H3BTG2 121 aa8.97□□□□□ -0.97
SRGAP1-205ENST00000542841 AGPAT2O15120 278 aa8.97□□□□□ -0.97
SRGAP1-205ENST00000542841 SCGB2A1O75556 95 aa8.97□□□□□ -0.97
SRGAP1-205ENST00000542841 MT-CO2P00403 227 aa8.97□□□□□ -0.97
SRGAP1-205ENST00000542841 FCGR2BP31994 310 aaPredicted RBP8.97□□□□□ -0.97
SRGAP1-205ENST00000542841 RAB2AP61019 212 aa8.97□□□□□ -0.97
SRGAP1-205ENST00000542841 ACOT6Q3I5F7 207 aaPredicted RBP8.97□□□□□ -0.97
SRGAP1-205ENST00000542841 Q6ZRG5 221 aa8.97□□□□□ -0.97
SRGAP1-205ENST00000542841 COMMD1Q8N668 190 aa8.97□□□□□ -0.97
SRGAP1-205ENST00000542841 LINC00482Q8N8I6 264 aa8.97□□□□□ -0.97
SRGAP1-205ENST00000542841 OR4X1Q8NH49 305 aa8.97□□□□□ -0.97
SRGAP1-205ENST00000542841 LYPD6BQ8NI32 183 aa8.97□□□□□ -0.97
SRGAP1-205ENST00000542841 FANCD2OSQ96PS1 177 aa8.97□□□□□ -0.97
SRGAP1-205ENST00000542841 TRGV9Q99603 122 aa8.97□□□□□ -0.97
SRGAP1-205ENST00000542841 TXN2Q99757 166 aa8.97□□□□□ -0.97
SRGAP1-205ENST00000542841 MCRIP2Q9BUT9 160 aaKnown RBP8.97□□□□□ -0.97
SRGAP1-205ENST00000542841 PLA2G2EQ9NZK7 142 aa8.97□□□□□ -0.97
SRGAP1-205ENST00000542841 TRBV9A0A0B4J1U6 114 aa8.96□□□□□ -0.98
SRGAP1-205ENST00000542841 K7EIM0 57 aa8.96□□□□□ -0.98
SRGAP1-205ENST00000542841 HBE1P02100 147 aa8.96□□□□□ -0.98
SRGAP1-205ENST00000542841 FABP1P07148 127 aa8.96□□□□□ -0.98
SRGAP1-205ENST00000542841 APELAP0DMC3 54 aa8.96□□□□□ -0.98
SRGAP1-205ENST00000542841 M6PRP20645 277 aa8.96□□□□□ -0.98
SRGAP1-205ENST00000542841 NPBWR1P48145 328 aa8.96□□□□□ -0.98
SRGAP1-205ENST00000542841 PRR20EP86478 221 aa8.96□□□□□ -0.98
SRGAP1-205ENST00000542841 PRR20CP86479 221 aa8.96□□□□□ -0.98
SRGAP1-205ENST00000542841 PRR20DP86480 221 aa8.96□□□□□ -0.98
SRGAP1-205ENST00000542841 PRR20BP86481 221 aa8.96□□□□□ -0.98
SRGAP1-205ENST00000542841 PRR20AP86496 221 aa8.96□□□□□ -0.98
SRGAP1-205ENST00000542841 ECSCRQ19T08 205 aa8.96□□□□□ -0.98
SRGAP1-205ENST00000542841 FFAR4Q5NUL3 377 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms