RNA–Protein interactions for RNA: ENST00000542502.5

MDM2-228, Transcript of MDM2 proto-oncogene, humanhuman

TSL 1 (best)

Gene MDM2, Length 1,127 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-228ENST00000542502 RAMP3O60896 148 aa3.41□□□□□ -1.86
MDM2-228ENST00000542502 MED6O75586 246 aa3.41□□□□□ -1.86
MDM2-228ENST00000542502 S1PR2O95136 353 aa3.41□□□□□ -1.86
MDM2-228ENST00000542502 IGLV2-23P01705 113 aa3.41□□□□□ -1.86
MDM2-228ENST00000542502 HLA-AP01891 365 aaKnown RBP3.41□□□□□ -1.86
MDM2-228ENST00000542502 TCRBP04435 133 aa3.41□□□□□ -1.86
MDM2-228ENST00000542502 IL5P05113 134 aa3.41□□□□□ -1.86
MDM2-228ENST00000542502 CRYGBP07316 175 aa3.41□□□□□ -1.86
MDM2-228ENST00000542502 TRAPPC2P0DI81 140 aa3.41□□□□□ -1.86
MDM2-228ENST00000542502 TRAPPC2BP0DI82 140 aa3.41□□□□□ -1.86
MDM2-228ENST00000542502 SULT1A3P0DMM9 295 aa3.41□□□□□ -1.86
MDM2-228ENST00000542502 SULT1A4P0DMN0 295 aa3.41□□□□□ -1.86
MDM2-228ENST00000542502 DEFA4P12838 97 aa3.41□□□□□ -1.86
MDM2-228ENST00000542502 AZU1P20160 251 aa3.41□□□□□ -1.86
MDM2-228ENST00000542502 SNCAP37840 140 aa3.41□□□□□ -1.86
MDM2-228ENST00000542502 RPL27AP46776 148 aaKnown RBP3.41□□□□□ -1.86
MDM2-228ENST00000542502 CCR6P51684 374 aa3.41□□□□□ -1.86
MDM2-228ENST00000542502 SPCS3P61009 180 aa3.41□□□□□ -1.86
MDM2-228ENST00000542502 HSPE1P61604 102 aaKnown RBP3.41□□□□□ -1.86
MDM2-228ENST00000542502 RPL30P62888 115 aaKnown RBP3.41□□□□□ -1.86
MDM2-228ENST00000542502 ERHP84090 104 aaKnown RBP3.41□□□□□ -1.86
MDM2-228ENST00000542502 CYCSP99999 105 aaKnown RBP3.41□□□□□ -1.86
MDM2-228ENST00000542502 FXYD3Q14802 87 aa3.41□□□□□ -1.86
MDM2-228ENST00000542502 TNXAQ16473 311 aa3.41□□□□□ -1.86
MDM2-228ENST00000542502 FAM53AQ6NSI3 398 aaPredicted RBP3.41□□□□□ -1.86
MDM2-228ENST00000542502 C5orf24Q7Z6I8 188 aa3.41□□□□□ -1.86
MDM2-228ENST00000542502 LYG2Q86SG7 212 aa3.41□□□□□ -1.86
MDM2-228ENST00000542502 NDUFA11Q86Y39 141 aa3.41□□□□□ -1.86
MDM2-228ENST00000542502 STPG2Q8N412 459 aa3.41□□□□□ -1.86
MDM2-228ENST00000542502 KLHDC1Q8N7A1 406 aa3.41□□□□□ -1.86
MDM2-228ENST00000542502 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.41□□□□□ -1.86
MDM2-228ENST00000542502 OR4F17Q8NGA8 305 aa3.41□□□□□ -1.86
MDM2-228ENST00000542502 OR5AU1Q8NGC0 362 aa3.41□□□□□ -1.86
MDM2-228ENST00000542502 OR52E5Q8NH55 327 aa3.41□□□□□ -1.86
MDM2-228ENST00000542502 GLYATL2Q8WU03 294 aa3.41□□□□□ -1.86
MDM2-228ENST00000542502 MITD1Q8WV92 249 aa3.41□□□□□ -1.86
MDM2-228ENST00000542502 ASB13Q8WXK3 278 aa3.41□□□□□ -1.86
MDM2-228ENST00000542502 SEC22AQ96IW7 307 aa3.41□□□□□ -1.86
MDM2-228ENST00000542502 UBE2E2Q96LR5 201 aa3.41□□□□□ -1.86
MDM2-228ENST00000542502 CIB3Q96Q77 187 aaPredicted RBP3.41□□□□□ -1.86
MDM2-228ENST00000542502 OR4F4Q96R69 305 aa3.41□□□□□ -1.86
MDM2-228ENST00000542502 SDHCQ99643 169 aaPredicted RBP3.41□□□□□ -1.86
MDM2-228ENST00000542502 MARVELD1Q9BSK0 173 aa3.41□□□□□ -1.86
MDM2-228ENST00000542502 GPR61Q9BZJ8 451 aa3.41□□□□□ -1.86
MDM2-228ENST00000542502 C20orf85Q9H1P6 137 aa3.41□□□□□ -1.86
MDM2-228ENST00000542502 FBXL15Q9H469 300 aa3.41□□□□□ -1.86
MDM2-228ENST00000542502 ZNF430Q9H8G1 570 aaPredicted RBP3.41□□□□□ -1.86
MDM2-228ENST00000542502 ENY2Q9NPA8 101 aa3.41□□□□□ -1.86
MDM2-228ENST00000542502 PARP11Q9NR21 331 aa3.41□□□□□ -1.86
MDM2-228ENST00000542502 TMEM14BQ9NUH8 114 aa3.41□□□□□ -1.86
MDM2-228ENST00000542502 TSSC4Q9Y5U2 329 aaPredicted RBP3.41□□□□□ -1.86
MDM2-228ENST00000542502 SOX21Q9Y651 276 aaPredicted RBP3.41□□□□□ -1.86
MDM2-228ENST00000542502 MGAM2Q2M2H8 2515 aa3.4□□□□□ -1.86
MDM2-228ENST00000542502 VWFP04275 2813 aa3.4□□□□□ -1.86
MDM2-228ENST00000542502 PLXNB1O43157 2135 aa3.4□□□□□ -1.86
MDM2-228ENST00000542502 LINC00854A0A1B0GVQ3 168 aa3.4□□□□□ -1.87
MDM2-228ENST00000542502 ZNF320A2RRD8 509 aa3.4□□□□□ -1.87
MDM2-228ENST00000542502 C9orf170A2RU37 121 aa3.4□□□□□ -1.87
MDM2-228ENST00000542502 MSGN1A6NI15 193 aa3.4□□□□□ -1.87
MDM2-228ENST00000542502 FAM223BA6NKX1 122 aa3.4□□□□□ -1.87
MDM2-228ENST00000542502 C15orf61A6NNL5 157 aa3.4□□□□□ -1.87
MDM2-228ENST00000542502 SRRM4A7MD48 611 aaKnown RBP3.4□□□□□ -1.87
MDM2-228ENST00000542502 PLA2G10O15496 165 aa3.4□□□□□ -1.87
MDM2-228ENST00000542502 SFT2D2O95562 160 aa3.4□□□□□ -1.87
MDM2-228ENST00000542502 CA2P00918 260 aa3.4□□□□□ -1.87
MDM2-228ENST00000542502 TSHBP01222 138 aa3.4□□□□□ -1.87
MDM2-228ENST00000542502 IFNA17P01571 189 aa3.4□□□□□ -1.87
MDM2-228ENST00000542502 OR5AC1P0C628 307 aa3.4□□□□□ -1.87
MDM2-228ENST00000542502 OR4E1P0C645 316 aa3.4□□□□□ -1.87
MDM2-228ENST00000542502 OR9G9P0C7N8 305 aa3.4□□□□□ -1.87
MDM2-228ENST00000542502 MDKP21741 143 aaPredicted RBP3.4□□□□□ -1.87
MDM2-228ENST00000542502 PAX6P26367 422 aa3.4□□□□□ -1.87
MDM2-228ENST00000542502 G6PCP35575 357 aa3.4□□□□□ -1.87
MDM2-228ENST00000542502 HTR2BP41595 481 aa3.4□□□□□ -1.87
MDM2-228ENST00000542502 CDX1P47902 265 aaPredicted RBP3.4□□□□□ -1.87
MDM2-228ENST00000542502 GNB1P62873 340 aa3.4□□□□□ -1.87
MDM2-228ENST00000542502 TMEM187Q14656 261 aa3.4□□□□□ -1.87
MDM2-228ENST00000542502 SMCO1Q147U7 214 aa3.4□□□□□ -1.87
MDM2-228ENST00000542502 TATDN3Q17R31 274 aa3.4□□□□□ -1.87
MDM2-228ENST00000542502 RGS21Q2M5E4 152 aa3.4□□□□□ -1.87
MDM2-228ENST00000542502 AARDQ4LEZ3 155 aa3.4□□□□□ -1.87
MDM2-228ENST00000542502 PDLIM3Q53GG5 364 aaPredicted RBP3.4□□□□□ -1.87
MDM2-228ENST00000542502 OR2B11Q5JQS5 317 aa3.4□□□□□ -1.87
MDM2-228ENST00000542502 FAAP20Q6NZ36 180 aa3.4□□□□□ -1.87
MDM2-228ENST00000542502 UNQ5815/PRO19632Q6UWF5 114 aa3.4□□□□□ -1.87
MDM2-228ENST00000542502 SH2D6Q7Z4S9 175 aa3.4□□□□□ -1.87
MDM2-228ENST00000542502 NRARPQ7Z6K4 114 aa3.4□□□□□ -1.87
MDM2-228ENST00000542502 FAM223AQ8IWN6 122 aa3.4□□□□□ -1.87
MDM2-228ENST00000542502 SELENOHQ8IZQ5 122 aaKnown RBP3.4□□□□□ -1.87
MDM2-228ENST00000542502 TTC9CQ8N5M4 171 aa3.4□□□□□ -1.87
MDM2-228ENST00000542502 SLC35G3Q8N808 338 aa3.4□□□□□ -1.87
MDM2-228ENST00000542502 MAPKAPK5-AS1Q8N8E1 139 aa3.4□□□□□ -1.87
MDM2-228ENST00000542502 NHLRC2Q8NBF2 726 aa3.4□□□□□ -1.87
MDM2-228ENST00000542502 NECAP1Q8NC96 275 aa3.4□□□□□ -1.87
MDM2-228ENST00000542502 ZNF431Q8TF32 576 aaPredicted RBP3.4□□□□□ -1.87
MDM2-228ENST00000542502 SRSF12Q8WXF0 261 aaKnown RBP3.4□□□□□ -1.87
MDM2-228ENST00000542502 MRGPRFQ96AM1 343 aa3.4□□□□□ -1.87
MDM2-228ENST00000542502 C5orf30Q96GV9 206 aa3.4□□□□□ -1.87
MDM2-228ENST00000542502 CXorf58Q96LI9 332 aa3.4□□□□□ -1.87
MDM2-228ENST00000542502 TP53RKQ96S44 253 aa3.4□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms