RNA–Protein interactions for RNA: ENST00000541366.1

COPA-205, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 2

Gene COPA, Length 616 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-205ENST00000541366 MXD1Q05195 221 aa8.26□□□□□ -1.09
COPA-205ENST00000541366 TBCEQ15813 527 aaPredicted RBP8.26□□□□□ -1.09
COPA-205ENST00000541366 USF2Q15853 346 aaPredicted RBP8.26□□□□□ -1.09
COPA-205ENST00000541366 KCTD21Q4G0X4 260 aa8.26□□□□□ -1.09
COPA-205ENST00000541366 CMTM1Q8IZ96 169 aa8.26□□□□□ -1.09
COPA-205ENST00000541366 OR4X1Q8NH49 305 aa8.26□□□□□ -1.09
COPA-205ENST00000541366 LINC00588Q9Y4M8 146 aa8.26□□□□□ -1.09
COPA-205ENST00000541366 HNRNPCP07910 306 aaKnown RBP eCLIP8.25□□□□□ -1.09
COPA-205ENST00000541366 OPRK1P41145 380 aa8.25□□□□□ -1.09
COPA-205ENST00000541366 ETV6P41212 452 aa8.25□□□□□ -1.09
COPA-205ENST00000541366 AQP4P55087 323 aa8.25□□□□□ -1.09
COPA-205ENST00000541366 TBC1D26Q86UD7 250 aa8.25□□□□□ -1.09
COPA-205ENST00000541366 SLC35G3Q8N808 338 aa8.25□□□□□ -1.09
COPA-205ENST00000541366 OR4B1Q8NGF8 309 aa8.25□□□□□ -1.09
COPA-205ENST00000541366 NRN1Q9NPD7 142 aa8.25□□□□□ -1.09
COPA-205ENST00000541366 IFT46Q9NQC8 304 aa8.25□□□□□ -1.09
COPA-205ENST00000541366 A0A0B4J293 547 aa8.24□□□□□ -1.09
COPA-205ENST00000541366 F6UB75 175 aa8.24□□□□□ -1.09
COPA-205ENST00000541366 HBE1P02100 147 aa8.24□□□□□ -1.09
COPA-205ENST00000541366 SDC2P34741 201 aa8.24□□□□□ -1.09
COPA-205ENST00000541366 NKX2-1P43699 371 aaPredicted RBP8.24□□□□□ -1.09
COPA-205ENST00000541366 CBX5P45973 191 aa8.24□□□□□ -1.09
COPA-205ENST00000541366 AP2S1P53680 142 aaPredicted RBP8.24□□□□□ -1.09
COPA-205ENST00000541366 DHODHQ02127 395 aa8.24□□□□□ -1.09
COPA-205ENST00000541366 SIGLEC15Q6ZMC9 328 aa8.24□□□□□ -1.09
COPA-205ENST00000541366 C7orf50Q9BRJ6 194 aaKnown RBP8.24□□□□□ -1.09
COPA-205ENST00000541366 WDR12Q9GZL7 423 aaKnown RBP8.24□□□□□ -1.09
COPA-205ENST00000541366 UBR4Q5T4S7 5183 aa8.23□□□□□ -1.09
COPA-205ENST00000541366 BUB3O43684 328 aa8.23□□□□□ -1.09
COPA-205ENST00000541366 IGKV1-5P01602 117 aa8.23□□□□□ -1.09
COPA-205ENST00000541366 IGLC1P0CG04 106 aa8.23□□□□□ -1.09
COPA-205ENST00000541366 XGP55808 180 aa8.23□□□□□ -1.09
COPA-205ENST00000541366 FCN2Q15485 313 aa8.23□□□□□ -1.09
COPA-205ENST00000541366 RRN3P1Q2M238 152 aa8.23□□□□□ -1.09
COPA-205ENST00000541366 IDNKQ5T6J7 187 aa8.23□□□□□ -1.09
COPA-205ENST00000541366 Q5VSD8 79 aa8.23□□□□□ -1.09
COPA-205ENST00000541366 OR5H2Q8NGV7 314 aa8.23□□□□□ -1.09
COPA-205ENST00000541366 LINC00052Q96N35 136 aa8.23□□□□□ -1.09
COPA-205ENST00000541366 SAV1Q9H4B6 383 aaPredicted RBP8.23□□□□□ -1.09
COPA-205ENST00000541366 GOLT1BQ9Y3E0 138 aa8.23□□□□□ -1.09
COPA-205ENST00000541366 F5H768 121 aa8.22□□□□□ -1.09
COPA-205ENST00000541366 INS-IGF2F8WCM5 200 aa8.22□□□□□ -1.09
COPA-205ENST00000541366 IL4P05112 153 aa8.22□□□□□ -1.09
COPA-205ENST00000541366 DEFB130BP0DP73 79 aa8.22□□□□□ -1.09
COPA-205ENST00000541366 DEFB130AP0DP74 79 aa8.22□□□□□ -1.09
COPA-205ENST00000541366 HOXA1P49639 335 aaPredicted RBP8.22□□□□□ -1.09
COPA-205ENST00000541366 RND2P52198 227 aa8.22□□□□□ -1.09
COPA-205ENST00000541366 SUB1P53999 127 aaKnown RBP eCLIP8.22□□□□□ -1.09
COPA-205ENST00000541366 CCL18P55774 89 aa8.22□□□□□ -1.09
COPA-205ENST00000541366 ZNF79Q15937 498 aa8.22□□□□□ -1.09
COPA-205ENST00000541366 PRSS54Q6PEW0 395 aa8.22□□□□□ -1.09
COPA-205ENST00000541366 LYPD1Q8N2G4 141 aa8.22□□□□□ -1.09
COPA-205ENST00000541366 OR6F1Q8NGZ6 308 aa8.22□□□□□ -1.09
COPA-205ENST00000541366 Q8WTZ3 238 aa8.22□□□□□ -1.09
COPA-205ENST00000541366 VCXQ9H320 206 aa8.22□□□□□ -1.09
COPA-205ENST00000541366 SEPSECSQ9HD40 501 aaKnown RBP8.22□□□□□ -1.09
COPA-205ENST00000541366 DIABLOQ9NR28 239 aa8.22□□□□□ -1.09
COPA-205ENST00000541366 ANAPC10Q9UM13 185 aa8.22□□□□□ -1.09
COPA-205ENST00000541366 A0A0A6YYH2 397 aa8.21□□□□□ -1.1
COPA-205ENST00000541366 A6NJ64 397 aa8.21□□□□□ -1.1
COPA-205ENST00000541366 ZNF705GA8MUZ8 300 aaPredicted RBP8.21□□□□□ -1.1
COPA-205ENST00000541366 CORTO00230 105 aa8.21□□□□□ -1.1
COPA-205ENST00000541366 NXPH3O95157 252 aa8.21□□□□□ -1.1
COPA-205ENST00000541366 P0C879 139 aa8.21□□□□□ -1.1
COPA-205ENST00000541366 HLA-DMAP28067 261 aa8.21□□□□□ -1.1
COPA-205ENST00000541366 OR10J1P30954 320 aa8.21□□□□□ -1.1
COPA-205ENST00000541366 HRH1P35367 487 aa8.21□□□□□ -1.1
COPA-205ENST00000541366 RPL5P46777 297 aaKnown RBP8.21□□□□□ -1.1
COPA-205ENST00000541366 RORCP51449 518 aa8.21□□□□□ -1.1
COPA-205ENST00000541366 TAS2R20P59543 309 aa8.21□□□□□ -1.1
COPA-205ENST00000541366 PSG9Q00887 426 aa8.21□□□□□ -1.1
COPA-205ENST00000541366 FAM78BQ5VT40 261 aa8.21□□□□□ -1.1
COPA-205ENST00000541366 FOXI2Q6ZQN5 318 aa8.21□□□□□ -1.1
COPA-205ENST00000541366 SSX7Q7RTT5 188 aa8.21□□□□□ -1.1
COPA-205ENST00000541366 LYSMD2Q8IV50 215 aa8.21□□□□□ -1.1
COPA-205ENST00000541366 OR1S2Q8NGQ3 325 aa8.21□□□□□ -1.1
COPA-205ENST00000541366 RNF141Q8WVD5 230 aa8.21□□□□□ -1.1
COPA-205ENST00000541366 NRG4Q8WWG1 115 aa8.21□□□□□ -1.1
COPA-205ENST00000541366 UHRF2Q96PU4 802 aa8.21□□□□□ -1.1
COPA-205ENST00000541366 MAGT1Q9H0U3 335 aa8.21□□□□□ -1.1
COPA-205ENST00000541366 Q9H8V8 135 aa8.21□□□□□ -1.1
COPA-205ENST00000541366 FAM212BQ9NTI7 297 aaPredicted RBP8.21□□□□□ -1.1
COPA-205ENST00000541366 MDFICQ9P1T7 246 aa8.21□□□□□ -1.1
COPA-205ENST00000541366 TRAV30A0A087WSZ9 112 aa8.2□□□□□ -1.1
COPA-205ENST00000541366 A0A0G2JRQ6 117 aa8.2□□□□□ -1.1
COPA-205ENST00000541366 NAT1P18440 290 aa8.2□□□□□ -1.1
COPA-205ENST00000541366 YPEL3P61236 119 aaPredicted RBP8.2□□□□□ -1.1
COPA-205ENST00000541366 BSXQ3C1V8 233 aa8.2□□□□□ -1.1
COPA-205ENST00000541366 C18orf15Q96N68 181 aa8.2□□□□□ -1.1
COPA-205ENST00000541366 M0QYG6 137 aa8.19□□□□□ -1.1
COPA-205ENST00000541366 SOCS3O14543 225 aa8.19□□□□□ -1.1
COPA-205ENST00000541366 SCGB2A1O75556 95 aa8.19□□□□□ -1.1
COPA-205ENST00000541366 SMR3BP02814 79 aaPredicted RBP8.19□□□□□ -1.1
COPA-205ENST00000541366 ELK1P19419 428 aa8.19□□□□□ -1.1
COPA-205ENST00000541366 BTF3P20290 206 aaKnown RBP8.19□□□□□ -1.1
COPA-205ENST00000541366 PSMB9P28065 219 aa8.19□□□□□ -1.1
COPA-205ENST00000541366 AKR1C2P52895 323 aa8.19□□□□□ -1.1
COPA-205ENST00000541366 TAS2R46P59540 309 aa8.19□□□□□ -1.1
COPA-205ENST00000541366 OR51G1Q8NGK1 321 aa8.19□□□□□ -1.1
COPA-205ENST00000541366 GPR146Q96CH1 333 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms