RNA–Protein interactions for RNA: ENST00000540539.5

CLIP1-214, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2 BASIC

Gene CLIP1, Length 2,592 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-214ENST00000540539 HEATR1Q9H583 2144 aaKnown RBP7.74□□□□□ -1.17
CLIP1-214ENST00000540539 CACNA1DQ01668 2161 aa7.74□□□□□ -1.17
CLIP1-214ENST00000540539 C17orf51A8MQB3 221 aa7.73□□□□□ -1.17
CLIP1-214ENST00000540539 IGLV2-8P01709 118 aa7.73□□□□□ -1.17
CLIP1-214ENST00000540539 SCTP09683 121 aa7.73□□□□□ -1.17
CLIP1-214ENST00000540539 GAGE2BQ13066 116 aa7.73□□□□□ -1.17
CLIP1-214ENST00000540539 GAGE2EQ4V326 116 aa7.73□□□□□ -1.17
CLIP1-214ENST00000540539 TMEM211Q6ICI0 200 aa7.73□□□□□ -1.17
CLIP1-214ENST00000540539 ZNF747Q9BV97 191 aa7.73□□□□□ -1.17
CLIP1-214ENST00000540539 TMEM126AQ9H061 195 aa7.73□□□□□ -1.17
CLIP1-214ENST00000540539 GAGE2DQ9UEU5 116 aa7.73□□□□□ -1.17
CLIP1-214ENST00000540539 LOC107984640A0A0U1RRK4 108 aa7.73□□□□□ -1.17
CLIP1-214ENST00000540539 TCRBV4S1A1TA0A5B7 111 aa7.73□□□□□ -1.17
CLIP1-214ENST00000540539 A8MWL6 223 aa7.73□□□□□ -1.17
CLIP1-214ENST00000540539 PRRG2O14669 202 aa7.73□□□□□ -1.17
CLIP1-214ENST00000540539 CSN1S1P47710 185 aa7.73□□□□□ -1.17
CLIP1-214ENST00000540539 TCF15Q12870 199 aa7.73□□□□□ -1.17
CLIP1-214ENST00000540539 OSR2Q8N2R0 312 aa7.73□□□□□ -1.17
CLIP1-214ENST00000540539 PRSS33Q8NF86 280 aa7.73□□□□□ -1.17
CLIP1-214ENST00000540539 CARD19Q96LW7 228 aa7.73□□□□□ -1.17
CLIP1-214ENST00000540539 TRIB1Q96RU8 372 aa7.73□□□□□ -1.17
CLIP1-214ENST00000540539 HSD17B10Q99714 261 aaKnown RBP7.73□□□□□ -1.17
CLIP1-214ENST00000540539 ARRDC1-AS1Q9H2J1 176 aa7.73□□□□□ -1.17
CLIP1-214ENST00000540539 ZNF442Q9H7R0 627 aa7.73□□□□□ -1.17
CLIP1-214ENST00000540539 OTOGLQ3ZCN5 2332 aa7.73□□□□□ -1.17
CLIP1-214ENST00000540539 EP300Q09472 2414 aaPredicted RBP7.73□□□□□ -1.17
CLIP1-214ENST00000540539 IFI6P09912 130 aa7.72□□□□□ -1.17
CLIP1-214ENST00000540539 NMUP48645 174 aa7.72□□□□□ -1.17
CLIP1-214ENST00000540539 MFAP4P55083 255 aa7.72□□□□□ -1.17
CLIP1-214ENST00000540539 TTC32Q5I0X7 151 aa7.72□□□□□ -1.17
CLIP1-214ENST00000540539 CFAP126Q5VTH2 177 aa7.72□□□□□ -1.17
CLIP1-214ENST00000540539 NHLRC2Q8NBF2 726 aa7.72□□□□□ -1.17
CLIP1-214ENST00000540539 NT5CQ8TCD5 201 aa7.72□□□□□ -1.17
CLIP1-214ENST00000540539 SPANXA1Q9NS26 97 aa7.72□□□□□ -1.17
CLIP1-214ENST00000540539 ZNF355PQ9NSJ1 428 aa7.72□□□□□ -1.17
CLIP1-214ENST00000540539 IDI2-AS1Q9NZ38 188 aa7.72□□□□□ -1.17
CLIP1-214ENST00000540539 IL36RNQ9UBH0 155 aa7.72□□□□□ -1.17
CLIP1-214ENST00000540539 DUSP13Q9UII6 198 aa7.72□□□□□ -1.17
CLIP1-214ENST00000540539 SOX21Q9Y651 276 aaPredicted RBP7.72□□□□□ -1.17
CLIP1-214ENST00000540539 LMO7DNF2Z398 122 aa7.72□□□□□ -1.17
CLIP1-214ENST00000540539 H0YIG0 161 aa7.72□□□□□ -1.17
CLIP1-214ENST00000540539 PF4P02776 101 aa7.72□□□□□ -1.17
CLIP1-214ENST00000540539 RPL7P18124 248 aaKnown RBP7.72□□□□□ -1.17
CLIP1-214ENST00000540539 MEOX1P50221 254 aa7.72□□□□□ -1.17
CLIP1-214ENST00000540539 MALLQ13021 153 aa7.72□□□□□ -1.17
CLIP1-214ENST00000540539 SFTPA2Q8IWL1 248 aa7.72□□□□□ -1.17
CLIP1-214ENST00000540539 PATE1Q8WXA2 126 aa7.72□□□□□ -1.17
CLIP1-214ENST00000540539 SLC25A33Q9BSK2 321 aa7.72□□□□□ -1.17
CLIP1-214ENST00000540539 SPRY4Q9C004 299 aa7.72□□□□□ -1.17
CLIP1-214ENST00000540539 DLL3Q9NYJ7 618 aa7.72□□□□□ -1.17
CLIP1-214ENST00000540539 PILRAQ9UKJ1 303 aa7.72□□□□□ -1.17
CLIP1-214ENST00000540539 PIGLQ9Y2B2 252 aa7.72□□□□□ -1.17
CLIP1-214ENST00000540539 PIGBOS1A0A0B4J2F0 54 aa7.71□□□□□ -1.17
CLIP1-214ENST00000540539 IGKV1-6A0A0C4DH72 117 aa7.71□□□□□ -1.17
CLIP1-214ENST00000540539 A0A1B0GXF2 115 aa7.71□□□□□ -1.17
CLIP1-214ENST00000540539 MYOD1P15172 320 aa7.71□□□□□ -1.17
CLIP1-214ENST00000540539 DEFB133Q30KQ1 61 aa7.71□□□□□ -1.17
CLIP1-214ENST00000540539 MBNL2Q5VZF2 373 aaKnown RBP7.71□□□□□ -1.17
CLIP1-214ENST00000540539 SLC25A45Q8N413 288 aa7.71□□□□□ -1.17
CLIP1-214ENST00000540539 PPDPFLQ8WWR9 84 aa7.71□□□□□ -1.17
CLIP1-214ENST00000540539 RASL10AQ92737 203 aa7.71□□□□□ -1.17
CLIP1-214ENST00000540539 LYRM4Q9HD34 91 aa7.71□□□□□ -1.17
CLIP1-214ENST00000540539 METRNQ9UJH8 293 aa7.71□□□□□ -1.17
CLIP1-214ENST00000540539 WDR83OSQ9Y284 106 aa7.71□□□□□ -1.17
CLIP1-214ENST00000540539 TANC2Q9HCD6 1990 aa7.71□□□□□ -1.18
CLIP1-214ENST00000540539 IGKV1-27A0A075B6S5 117 aa7.71□□□□□ -1.18
CLIP1-214ENST00000540539 TRAV4A0A0B4J268 109 aa7.71□□□□□ -1.18
CLIP1-214ENST00000540539 MGST3O14880 152 aa7.71□□□□□ -1.18
CLIP1-214ENST00000540539 DHRS3O75911 302 aa7.71□□□□□ -1.18
CLIP1-214ENST00000540539 LINC00694P0DN24 101 aa7.71□□□□□ -1.18
CLIP1-214ENST00000540539 FOXG1P55316 489 aaPredicted RBP7.71□□□□□ -1.18
CLIP1-214ENST00000540539 Q6ZS92 163 aa7.71□□□□□ -1.18
CLIP1-214ENST00000540539 RBMXL3Q8N7X1 1067 aaKnown RBP7.71□□□□□ -1.18
CLIP1-214ENST00000540539 OR1L8Q8NGR8 309 aa7.71□□□□□ -1.18
CLIP1-214ENST00000540539 RPEQ96AT9 228 aa7.71□□□□□ -1.18
CLIP1-214ENST00000540539 NUDT22Q9BRQ3 303 aa7.71□□□□□ -1.18
CLIP1-214ENST00000540539 ASXL3Q9C0F0 2248 aa7.71□□□□□ -1.18
CLIP1-214ENST00000540539 RIF1Q5UIP0 2472 aaKnown RBP7.71□□□□□ -1.18
CLIP1-214ENST00000540539 IGKV1-12A0A0C4DH73 117 aa7.7□□□□□ -1.18
CLIP1-214ENST00000540539 MOSP00540 346 aa7.7□□□□□ -1.18
CLIP1-214ENST00000540539 IGKV1D-12P01611 117 aa7.7□□□□□ -1.18
CLIP1-214ENST00000540539 IGLV3-1P01715 115 aa7.7□□□□□ -1.18
CLIP1-214ENST00000540539 CSN3P07498 182 aa7.7□□□□□ -1.18
CLIP1-214ENST00000540539 AREGP15514 252 aa7.7□□□□□ -1.18
CLIP1-214ENST00000540539 PLA2G2CQ5R387 149 aa7.7□□□□□ -1.18
CLIP1-214ENST00000540539 SLC37A2Q8TED4 501 aa7.7□□□□□ -1.18
CLIP1-214ENST00000540539 CHAC1Q9BUX1 264 aa7.7□□□□□ -1.18
CLIP1-214ENST00000540539 LSM4Q9Y4Z0 139 aaKnown RBP7.7□□□□□ -1.18
CLIP1-214ENST00000540539 ASCC3Q8N3C0 2202 aaKnown RBP7.7□□□□□ -1.18
CLIP1-214ENST00000540539 PCSK5Q92824 1860 aa7.7□□□□□ -1.18
CLIP1-214ENST00000540539 HIGD1CA8MV81 97 aa7.7□□□□□ -1.18
CLIP1-214ENST00000540539 NPIPB6E9PJ23 425 aa7.7□□□□□ -1.18
CLIP1-214ENST00000540539 LTAP01374 205 aa7.7□□□□□ -1.18
CLIP1-214ENST00000540539 B4GALT1P15291 398 aa7.7□□□□□ -1.18
CLIP1-214ENST00000540539 EVI2AP22794 236 aa7.7□□□□□ -1.18
CLIP1-214ENST00000540539 CDAP32320 146 aa7.7□□□□□ -1.18
CLIP1-214ENST00000540539 ERVK11-1P61568 191 aa7.7□□□□□ -1.18
CLIP1-214ENST00000540539 DAZAP2Q15038 168 aaPredicted RBP7.7□□□□□ -1.18
CLIP1-214ENST00000540539 RSPO4Q2I0M5 234 aaPredicted RBP7.7□□□□□ -1.18
CLIP1-214ENST00000540539 FAM19A5Q7Z5A7 132 aaPredicted RBP7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms