RNA–Protein interactions for RNA: ENST00000539721.5

TRAF3-204, Transcript of TNF receptor associated factor 3, humanhuman

TSL 2 BASIC

Gene TRAF3, Length 1,786 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-204ENST00000539721 C10orf99Q6UWK7 81 aa12.58□□□□□ -0.4
TRAF3-204ENST00000539721 TRGV9Q99603 122 aa12.58□□□□□ -0.4
TRAF3-204ENST00000539721 KLK15Q9H2R5 256 aa12.58□□□□□ -0.4
TRAF3-204ENST00000539721 SLC45A2Q9UMX9 530 aa12.58□□□□□ -0.4
TRAF3-204ENST00000539721 UMAD1C9J7I0 102 aa12.57□□□□□ -0.4
TRAF3-204ENST00000539721 IGLC1P0CG04 106 aa12.57□□□□□ -0.4
TRAF3-204ENST00000539721 RAB9AP51151 201 aa12.57□□□□□ -0.4
TRAF3-204ENST00000539721 RAB14P61106 215 aa12.57□□□□□ -0.4
TRAF3-204ENST00000539721 B2MP61769 119 aa12.57□□□□□ -0.4
TRAF3-204ENST00000539721 TEX38Q6PEX7 206 aa12.57□□□□□ -0.4
TRAF3-204ENST00000539721 LCNL1Q6ZST4 164 aa12.57□□□□□ -0.4
TRAF3-204ENST00000539721 STPG3Q8N7X2 389 aa12.57□□□□□ -0.4
TRAF3-204ENST00000539721 BPIFCQ8NFQ6 507 aa12.57□□□□□ -0.4
TRAF3-204ENST00000539721 ZNF502Q8TBZ5 544 aa12.57□□□□□ -0.4
TRAF3-204ENST00000539721 PCNPQ8WW12 178 aaKnown RBP12.57□□□□□ -0.4
TRAF3-204ENST00000539721 USMG5Q96IX5 58 aa12.57□□□□□ -0.4
TRAF3-204ENST00000539721 TXN2Q99757 166 aa12.57□□□□□ -0.4
TRAF3-204ENST00000539721 TRAV30A0A087WSZ9 112 aa12.56□□□□□ -0.4
TRAF3-204ENST00000539721 TRBV7-1A0A0A6YYK4 115 aa12.56□□□□□ -0.4
TRAF3-204ENST00000539721 F8W735 103 aaPredicted RBP12.56□□□□□ -0.4
TRAF3-204ENST00000539721 TSPAN15O95858 294 aa12.56□□□□□ -0.4
TRAF3-204ENST00000539721 GATA2P23769 480 aaPredicted RBP12.56□□□□□ -0.4
TRAF3-204ENST00000539721 PSMB8P28062 276 aa12.56□□□□□ -0.4
TRAF3-204ENST00000539721 FCGR2BP31994 310 aaPredicted RBP12.56□□□□□ -0.4
TRAF3-204ENST00000539721 RAB5CP51148 216 aa12.56□□□□□ -0.4
TRAF3-204ENST00000539721 ZNF90Q03938 601 aa12.56□□□□□ -0.4
TRAF3-204ENST00000539721 TIGITQ495A1 244 aa12.56□□□□□ -0.4
TRAF3-204ENST00000539721 VSIRQ9H7M9 311 aa12.56□□□□□ -0.4
TRAF3-204ENST00000539721 SLC39A9Q9NUM3 307 aa12.56□□□□□ -0.4
TRAF3-204ENST00000539721 OR2T8A6NH00 312 aa12.56□□□□□ -0.4
TRAF3-204ENST00000539721 SCGB2A1O75556 95 aa12.56□□□□□ -0.4
TRAF3-204ENST00000539721 ELANEP08246 267 aa12.56□□□□□ -0.4
TRAF3-204ENST00000539721 SELENOTP62341 195 aa12.56□□□□□ -0.4
TRAF3-204ENST00000539721 PRR20EP86478 221 aa12.56□□□□□ -0.4
TRAF3-204ENST00000539721 PRR20CP86479 221 aa12.56□□□□□ -0.4
TRAF3-204ENST00000539721 PRR20DP86480 221 aa12.56□□□□□ -0.4
TRAF3-204ENST00000539721 PRR20BP86481 221 aa12.56□□□□□ -0.4
TRAF3-204ENST00000539721 PRR20AP86496 221 aa12.56□□□□□ -0.4
TRAF3-204ENST00000539721 FOXE3Q13461 319 aa12.56□□□□□ -0.4
TRAF3-204ENST00000539721 TMEM41BQ5BJD5 291 aa12.56□□□□□ -0.4
TRAF3-204ENST00000539721 LRRC20Q8TCA0 184 aa12.56□□□□□ -0.4
TRAF3-204ENST00000539721 C16orf95Q9H693 158 aa12.56□□□□□ -0.4
TRAF3-204ENST00000539721 A0A0G2JLM5 398 aa12.55□□□□□ -0.4
TRAF3-204ENST00000539721 ZNF705EA8MWA4 302 aaPredicted RBP12.55□□□□□ -0.4
TRAF3-204ENST00000539721 MBP02144 154 aa12.55□□□□□ -0.4
TRAF3-204ENST00000539721 LINC00869P0C866 280 aa12.55□□□□□ -0.4
TRAF3-204ENST00000539721 GPR183P32249 361 aa12.55□□□□□ -0.4
TRAF3-204ENST00000539721 RAB2AP61019 212 aa12.55□□□□□ -0.4
TRAF3-204ENST00000539721 ACOT6Q3I5F7 207 aaPredicted RBP12.55□□□□□ -0.4
TRAF3-204ENST00000539721 CCDC140Q96MF4 163 aa12.55□□□□□ -0.4
TRAF3-204ENST00000539721 GAR1Q9NY12 217 aaKnown RBP12.55□□□□□ -0.4
TRAF3-204ENST00000539721 YIF1AO95070 293 aa12.54□□□□□ -0.4
TRAF3-204ENST00000539721 IGKV1-17P01599 117 aa12.54□□□□□ -0.4
TRAF3-204ENST00000539721 FABP1P07148 127 aa12.54□□□□□ -0.4
TRAF3-204ENST00000539721 ZNF616Q08AN1 781 aa12.54□□□□□ -0.4
TRAF3-204ENST00000539721 CLEC19AQ6UXS0 136 aa12.54□□□□□ -0.4
TRAF3-204ENST00000539721 KLHDC1Q8N7A1 406 aa12.54□□□□□ -0.4
TRAF3-204ENST00000539721 FAM213BQ8TBF2 198 aa12.54□□□□□ -0.4
TRAF3-204ENST00000539721 RPRMQ9NS64 109 aa12.54□□□□□ -0.4
TRAF3-204ENST00000539721 NDUFA7O95182 113 aa12.53□□□□□ -0.4
TRAF3-204ENST00000539721 IGHV3-11P01762 117 aa12.53□□□□□ -0.4
TRAF3-204ENST00000539721 CLEC3BP05452 202 aa12.53□□□□□ -0.4
TRAF3-204ENST00000539721 M6PRP20645 277 aa12.53□□□□□ -0.4
TRAF3-204ENST00000539721 FHITP49789 147 aa12.53□□□□□ -0.4
TRAF3-204ENST00000539721 SRSF2Q01130 221 aaKnown RBP12.53□□□□□ -0.4
TRAF3-204ENST00000539721 Q6ZRG5 221 aa12.53□□□□□ -0.4
TRAF3-204ENST00000539721 COMMD1Q8N668 190 aa12.53□□□□□ -0.4
TRAF3-204ENST00000539721 OR10G4Q8NGN3 311 aa12.53□□□□□ -0.4
TRAF3-204ENST00000539721 OR10G9Q8NGN4 311 aa12.53□□□□□ -0.4
TRAF3-204ENST00000539721 OR10G7Q8NGN6 311 aa12.53□□□□□ -0.4
TRAF3-204ENST00000539721 NUPL2O15504 423 aaKnown RBP12.53□□□□□ -0.4
TRAF3-204ENST00000539721 RPLP1P05386 114 aaKnown RBP12.53□□□□□ -0.4
TRAF3-204ENST00000539721 NMBP08949 121 aa12.53□□□□□ -0.4
TRAF3-204ENST00000539721 GCSAMLQ5JQS6 135 aa12.53□□□□□ -0.4
TRAF3-204ENST00000539721 CLLU1Q5K131 121 aa12.53□□□□□ -0.4
TRAF3-204ENST00000539721 DPPA3Q6W0C5 159 aa12.53□□□□□ -0.4
TRAF3-204ENST00000539721 LINC01006Q8NI28 216 aa12.53□□□□□ -0.4
TRAF3-204ENST00000539721 SAT2Q96F10 170 aaPredicted RBP12.53□□□□□ -0.4
TRAF3-204ENST00000539721 ATP6V0BQ99437 205 aa12.53□□□□□ -0.4
TRAF3-204ENST00000539721 TOMM40O96008 361 aa12.52□□□□□ -0.41
TRAF3-204ENST00000539721 CTSGP08311 255 aa12.52□□□□□ -0.41
TRAF3-204ENST00000539721 RD3LP0DJH9 198 aa12.52□□□□□ -0.41
TRAF3-204ENST00000539721 PSG1P11464 419 aa12.52□□□□□ -0.41
TRAF3-204ENST00000539721 YPEL3P61236 119 aaPredicted RBP12.52□□□□□ -0.41
TRAF3-204ENST00000539721 BLOC1S1P78537 153 aa12.52□□□□□ -0.41
TRAF3-204ENST00000539721 FAM122CQ6P4D5 195 aa12.52□□□□□ -0.41
TRAF3-204ENST00000539721 OR5AU1Q8NGC0 362 aa12.52□□□□□ -0.41
TRAF3-204ENST00000539721 CHRDL1Q9BU40 450 aa12.52□□□□□ -0.41
TRAF3-204ENST00000539721 GNB4Q9HAV0 340 aa12.52□□□□□ -0.41
TRAF3-204ENST00000539721 TGOLN2O43493 480 aa12.51□□□□□ -0.41
TRAF3-204ENST00000539721 ADMP35318 185 aa12.51□□□□□ -0.41
TRAF3-204ENST00000539721 ZNF491Q8N8L2 437 aa12.51□□□□□ -0.41
TRAF3-204ENST00000539721 RNF152Q8N8N0 203 aa12.51□□□□□ -0.41
TRAF3-204ENST00000539721 OR4X2Q8NGF9 303 aa12.51□□□□□ -0.41
TRAF3-204ENST00000539721 OR4F5Q8NH21 305 aa12.51□□□□□ -0.41
TRAF3-204ENST00000539721 DOK5Q9P104 306 aa12.51□□□□□ -0.41
TRAF3-204ENST00000539721 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.51□□□□□ -0.41
TRAF3-204ENST00000539721 KIAA0141Q14154 515 aaPredicted RBP12.51□□□□□ -0.41
TRAF3-204ENST00000539721 ZNF343Q6P1L6 599 aa12.51□□□□□ -0.41
TRAF3-204ENST00000539721 SPSB3Q6PJ21 355 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms