RNA–Protein interactions for RNA: ENST00000526821.5

ATPAF1-208, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 3

Gene ATPAF1, Length 1,222 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-208ENST00000526821 HLA-DRB1P01911 266 aa4.83□□□□□ -1.64
ATPAF1-208ENST00000526821 CRYGCP07315 174 aa4.83□□□□□ -1.64
ATPAF1-208ENST00000526821 OR13C7P0DN81 318 aa4.83□□□□□ -1.64
ATPAF1-208ENST00000526821 AREGP15514 252 aa4.83□□□□□ -1.64
ATPAF1-208ENST00000526821 GPX4P36969 197 aaPredicted RBP4.83□□□□□ -1.64
ATPAF1-208ENST00000526821 SNCAP37840 140 aa4.83□□□□□ -1.64
ATPAF1-208ENST00000526821 RAB5CP51148 216 aa4.83□□□□□ -1.64
ATPAF1-208ENST00000526821 MFAP2P55001 183 aa4.83□□□□□ -1.64
ATPAF1-208ENST00000526821 CX3CL1P78423 397 aa4.83□□□□□ -1.64
ATPAF1-208ENST00000526821 CYB5R2Q6BCY4 276 aa4.83□□□□□ -1.64
ATPAF1-208ENST00000526821 CIARTQ8N365 385 aaPredicted RBP4.83□□□□□ -1.64
ATPAF1-208ENST00000526821 LYPD6BQ8NI32 183 aa4.83□□□□□ -1.64
ATPAF1-208ENST00000526821 CXorf58Q96LI9 332 aa4.83□□□□□ -1.64
ATPAF1-208ENST00000526821 NPCDR1Q9BY65 106 aa4.83□□□□□ -1.64
ATPAF1-208ENST00000526821 PARP11Q9NR21 331 aa4.83□□□□□ -1.64
ATPAF1-208ENST00000526821 C1RLQ9NZP8 487 aa4.83□□□□□ -1.64
ATPAF1-208ENST00000526821 SOX21Q9Y651 276 aaPredicted RBP4.83□□□□□ -1.64
ATPAF1-208ENST00000526821 ZFHX3Q15911 3703 aa4.83□□□□□ -1.64
ATPAF1-208ENST00000526821 ANK3Q12955 4377 aaKnown RBP4.83□□□□□ -1.64
ATPAF1-208ENST00000526821 TEX15Q9BXT5 2789 aa4.82□□□□□ -1.64
ATPAF1-208ENST00000526821 FLNAP21333 2647 aaKnown RBP4.82□□□□□ -1.64
ATPAF1-208ENST00000526821 IGHV7-81A0A0B4J1V7 117 aa4.82□□□□□ -1.64
ATPAF1-208ENST00000526821 UBE2L5PA0A1B0GUS4 154 aa4.82□□□□□ -1.64
ATPAF1-208ENST00000526821 A6NDX4 124 aa4.82□□□□□ -1.64
ATPAF1-208ENST00000526821 MFSD2BA6NFX1 497 aa4.82□□□□□ -1.64
ATPAF1-208ENST00000526821 SOX15O60248 233 aa4.82□□□□□ -1.64
ATPAF1-208ENST00000526821 MPDU1O75352 247 aa4.82□□□□□ -1.64
ATPAF1-208ENST00000526821 IFNA4P05014 189 aa4.82□□□□□ -1.64
ATPAF1-208ENST00000526821 FBP1P09467 338 aa4.82□□□□□ -1.64
ATPAF1-208ENST00000526821 SUB1P53999 127 aaKnown RBP eCLIP4.82□□□□□ -1.64
ATPAF1-208ENST00000526821 SERF2P84101 59 aa4.82□□□□□ -1.64
ATPAF1-208ENST00000526821 NDPQ00604 133 aa4.82□□□□□ -1.64
ATPAF1-208ENST00000526821 GAMTQ14353 236 aa4.82□□□□□ -1.64
ATPAF1-208ENST00000526821 FXYD3Q14802 87 aa4.82□□□□□ -1.64
ATPAF1-208ENST00000526821 PLGLAQ15195 96 aa4.82□□□□□ -1.64
ATPAF1-208ENST00000526821 KLK9Q2XQG4 91 aa4.82□□□□□ -1.64
ATPAF1-208ENST00000526821 AWAT1Q58HT5 328 aa4.82□□□□□ -1.64
ATPAF1-208ENST00000526821 ASPHD1Q5U4P2 390 aa4.82□□□□□ -1.64
ATPAF1-208ENST00000526821 BTNL8Q6UX41 500 aa4.82□□□□□ -1.64
ATPAF1-208ENST00000526821 EIF4E3Q8N5X7 224 aaKnown RBP4.82□□□□□ -1.64
ATPAF1-208ENST00000526821 C5orf56Q8N8D9 126 aa4.82□□□□□ -1.64
ATPAF1-208ENST00000526821 OR1P1Q8NH06 330 aa4.82□□□□□ -1.64
ATPAF1-208ENST00000526821 SCGB1C1Q8TD33 95 aa4.82□□□□□ -1.64
ATPAF1-208ENST00000526821 RNASEH2CQ8TDP1 164 aaKnown RBP4.82□□□□□ -1.64
ATPAF1-208ENST00000526821 CACNG8Q8WXS5 425 aa4.82□□□□□ -1.64
ATPAF1-208ENST00000526821 RBM14Q96PK6 669 aaKnown RBP4.82□□□□□ -1.64
ATPAF1-208ENST00000526821 RSG1Q9BU20 258 aa4.82□□□□□ -1.64
ATPAF1-208ENST00000526821 FNDC4Q9H6D8 234 aaPredicted RBP4.82□□□□□ -1.64
ATPAF1-208ENST00000526821 NPVFQ9HCQ7 196 aa4.82□□□□□ -1.64
ATPAF1-208ENST00000526821 KLK9Q9UKQ9 250 aa4.82□□□□□ -1.64
ATPAF1-208ENST00000526821 FBXO7Q9Y3I1 522 aa4.82□□□□□ -1.64
ATPAF1-208ENST00000526821 F11RQ9Y624 299 aaKnown RBP4.82□□□□□ -1.64
ATPAF1-208ENST00000526821 ABCA1O95477 2261 aa4.82□□□□□ -1.64
ATPAF1-208ENST00000526821 CELSR1Q9NYQ6 3014 aa4.82□□□□□ -1.64
ATPAF1-208ENST00000526821 IGKV1OR2-108A0A075B7D4 117 aa4.81□□□□□ -1.64
ATPAF1-208ENST00000526821 NCBP2LA6PVI3 153 aaKnown RBP4.81□□□□□ -1.64
ATPAF1-208ENST00000526821 NPIPB5A8MRT5 1133 aa4.81□□□□□ -1.64
ATPAF1-208ENST00000526821 ZNF705EA8MWA4 302 aaPredicted RBP4.81□□□□□ -1.64
ATPAF1-208ENST00000526821 KRTAP29-1A8MX34 341 aaPredicted RBP4.81□□□□□ -1.64
ATPAF1-208ENST00000526821 CNIH1O95406 144 aa4.81□□□□□ -1.64
ATPAF1-208ENST00000526821 REG1AP05451 166 aa4.81□□□□□ -1.64
ATPAF1-208ENST00000526821 FGF7P21781 194 aa4.81□□□□□ -1.64
ATPAF1-208ENST00000526821 FHITP49789 147 aa4.81□□□□□ -1.64
ATPAF1-208ENST00000526821 CRIP2P52943 208 aaPredicted RBP4.81□□□□□ -1.64
ATPAF1-208ENST00000526821 GNB1P62873 340 aa4.81□□□□□ -1.64
ATPAF1-208ENST00000526821 SLC25A24Q6NUK1 477 aa4.81□□□□□ -1.64
ATPAF1-208ENST00000526821 ACSM6Q6P461 480 aa4.81□□□□□ -1.64
ATPAF1-208ENST00000526821 DPPA3Q6W0C5 159 aa4.81□□□□□ -1.64
ATPAF1-208ENST00000526821 TMEM182Q6ZP80 229 aaPredicted RBP4.81□□□□□ -1.64
ATPAF1-208ENST00000526821 Q6ZRG5 221 aa4.81□□□□□ -1.64
ATPAF1-208ENST00000526821 SLC16A13Q7RTY0 426 aa4.81□□□□□ -1.64
ATPAF1-208ENST00000526821 TMEM144Q7Z5S9 345 aa4.81□□□□□ -1.64
ATPAF1-208ENST00000526821 COMMD7Q86VX2 200 aa4.81□□□□□ -1.64
ATPAF1-208ENST00000526821 TTC9CQ8N5M4 171 aa4.81□□□□□ -1.64
ATPAF1-208ENST00000526821 THAP8Q8NA92 274 aa4.81□□□□□ -1.64
ATPAF1-208ENST00000526821 NANPQ8TBE9 248 aa4.81□□□□□ -1.64
ATPAF1-208ENST00000526821 ABHD5Q8WTS1 349 aa4.81□□□□□ -1.64
ATPAF1-208ENST00000526821 SSMEM1Q8WWF3 244 aa4.81□□□□□ -1.64
ATPAF1-208ENST00000526821 ARPC1AQ92747 370 aa4.81□□□□□ -1.64
ATPAF1-208ENST00000526821 MGST2Q99735 147 aa4.81□□□□□ -1.64
ATPAF1-208ENST00000526821 SSX3Q99909 188 aa4.81□□□□□ -1.64
ATPAF1-208ENST00000526821 SLC25A33Q9BSK2 321 aa4.81□□□□□ -1.64
ATPAF1-208ENST00000526821 VSIRQ9H7M9 311 aa4.81□□□□□ -1.64
ATPAF1-208ENST00000526821 RPRMQ9NS64 109 aa4.81□□□□□ -1.64
ATPAF1-208ENST00000526821 MOB4Q9Y3A3 225 aa4.81□□□□□ -1.64
ATPAF1-208ENST00000526821 FAM96BQ9Y3D0 163 aa4.81□□□□□ -1.64
ATPAF1-208ENST00000526821 NOTCH2Q04721 2471 aa4.81□□□□□ -1.64
ATPAF1-208ENST00000526821 MXRA5Q9NR99 2828 aa4.8□□□□□ -1.64
ATPAF1-208ENST00000526821 TLN2Q9Y4G6 2542 aa4.8□□□□□ -1.64
ATPAF1-208ENST00000526821 IGKV1D-37A0A075B6S9 117 aa4.8□□□□□ -1.64
ATPAF1-208ENST00000526821 TRAV1-1A0A0B4J248 108 aa4.8□□□□□ -1.64
ATPAF1-208ENST00000526821 C17orf112F2Z3M2 114 aa4.8□□□□□ -1.64
ATPAF1-208ENST00000526821 H3BUX3 64 aa4.8□□□□□ -1.64
ATPAF1-208ENST00000526821 I3L2K1 104 aa4.8□□□□□ -1.64
ATPAF1-208ENST00000526821 CORTO00230 105 aa4.8□□□□□ -1.64
ATPAF1-208ENST00000526821 TSPAN9O75954 239 aa4.8□□□□□ -1.64
ATPAF1-208ENST00000526821 YIF1AO95070 293 aa4.8□□□□□ -1.64
ATPAF1-208ENST00000526821 LINC00869P0C866 280 aa4.8□□□□□ -1.64
ATPAF1-208ENST00000526821 OPRK1P41145 380 aa4.8□□□□□ -1.64
ATPAF1-208ENST00000526821 RPL29P47914 159 aaKnown RBP4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms