RNA–Protein interactions for RNA: ENST00000523390.1

PCDHGB1-201, Transcript of protocadherin gamma subfamily B, 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGB1, Length 4,590 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1-201ENST00000523390 A0A1B0GV90 55 aa10.7□□□□□ -0.7
PCDHGB1-201ENST00000523390 TCRBV4S1A1TA0A5B7 111 aa10.7□□□□□ -0.7
PCDHGB1-201ENST00000523390 GRIFINA4D1Z8 144 aa10.7□□□□□ -0.7
PCDHGB1-201ENST00000523390 HLA-DRB1P01911 266 aa10.7□□□□□ -0.7
PCDHGB1-201ENST00000523390 CX3CL1P78423 397 aa10.7□□□□□ -0.7
PCDHGB1-201ENST00000523390 SPTBN4Q9H254 2564 aa10.7□□□□□ -0.7
PCDHGB1-201ENST00000523390 HIST1H1AQ02539 215 aaPredicted RBP10.7□□□□□ -0.7
PCDHGB1-201ENST00000523390 MST1LQ2TV78 715 aa10.7□□□□□ -0.7
PCDHGB1-201ENST00000523390 OR8A1Q8NGG7 326 aa10.7□□□□□ -0.7
PCDHGB1-201ENST00000523390 VN1R17PQ8TDU5 208 aa10.7□□□□□ -0.7
PCDHGB1-201ENST00000523390 GATA4P43694 442 aa10.69□□□□□ -0.7
PCDHGB1-201ENST00000523390 GNG5P63218 68 aa10.69□□□□□ -0.7
PCDHGB1-201ENST00000523390 TMEM167AQ8TBQ9 72 aa10.69□□□□□ -0.7
PCDHGB1-201ENST00000523390 RNF125Q96EQ8 232 aa10.69□□□□□ -0.7
PCDHGB1-201ENST00000523390 IGLV3-9A0A075B6K5 115 aa10.69□□□□□ -0.7
PCDHGB1-201ENST00000523390 NDUFS6O75380 124 aaKnown RBP10.69□□□□□ -0.7
PCDHGB1-201ENST00000523390 SRIP30626 198 aa10.69□□□□□ -0.7
PCDHGB1-201ENST00000523390 RPL23P62829 140 aaKnown RBP10.69□□□□□ -0.7
PCDHGB1-201ENST00000523390 HSPB9Q9BQS6 159 aa10.69□□□□□ -0.7
PCDHGB1-201ENST00000523390 TRAV5A0A0B4J249 113 aa10.69□□□□□ -0.7
PCDHGB1-201ENST00000523390 C5orf52A6NGY3 159 aa10.69□□□□□ -0.7
PCDHGB1-201ENST00000523390 FOSL1P15407 271 aa10.69□□□□□ -0.7
PCDHGB1-201ENST00000523390 FGF23Q9GZV9 251 aaPredicted RBP10.69□□□□□ -0.7
PCDHGB1-201ENST00000523390 TMEM191AQ9H0A3 160 aa10.69□□□□□ -0.7
PCDHGB1-201ENST00000523390 ANKRD11Q6UB99 2663 aaPredicted RBP10.69□□□□□ -0.7
PCDHGB1-201ENST00000523390 CEACAM4O75871 244 aa10.68□□□□□ -0.7
PCDHGB1-201ENST00000523390 GRNP28799 593 aaKnown RBP10.68□□□□□ -0.7
PCDHGB1-201ENST00000523390 SPATA31B1PQ5VZV4 182 aa10.68□□□□□ -0.7
PCDHGB1-201ENST00000523390 MBD3L1Q8WWY6 194 aa10.68□□□□□ -0.7
PCDHGB1-201ENST00000523390 Q9H3A6 140 aa10.68□□□□□ -0.7
PCDHGB1-201ENST00000523390 IGHV3OR16-12A0A075B7B8 117 aa10.68□□□□□ -0.7
PCDHGB1-201ENST00000523390 A0A0G2JLM5 398 aa10.68□□□□□ -0.7
PCDHGB1-201ENST00000523390 C15orf62A8K5M9 175 aa10.68□□□□□ -0.7
PCDHGB1-201ENST00000523390 BUB1B-PAK6H3BSN5 160 aa10.68□□□□□ -0.7
PCDHGB1-201ENST00000523390 CD5P06127 495 aa10.68□□□□□ -0.7
PCDHGB1-201ENST00000523390 PTTG1IPP53801 180 aa10.68□□□□□ -0.7
PCDHGB1-201ENST00000523390 DGAT2L7PQ6IED9 249 aa10.68□□□□□ -0.7
PCDHGB1-201ENST00000523390 PAM16Q9Y3D7 125 aa10.68□□□□□ -0.7
PCDHGB1-201ENST00000523390 GPX1P07203 203 aa10.68□□□□□ -0.7
PCDHGB1-201ENST00000523390 RNF224P0DH78 156 aa10.68□□□□□ -0.7
PCDHGB1-201ENST00000523390 CDX1P47902 265 aaPredicted RBP10.68□□□□□ -0.7
PCDHGB1-201ENST00000523390 MLANAQ16655 118 aa10.68□□□□□ -0.7
PCDHGB1-201ENST00000523390 C2orf83Q53S99 150 aa10.68□□□□□ -0.7
PCDHGB1-201ENST00000523390 OR1P1Q8NH06 330 aa10.68□□□□□ -0.7
PCDHGB1-201ENST00000523390 TCAPO15273 167 aa10.68□□□□□ -0.7
PCDHGB1-201ENST00000523390 CKS2P33552 79 aa10.68□□□□□ -0.7
PCDHGB1-201ENST00000523390 MUC21A0A0G2JKD1 596 aa10.67□□□□□ -0.7
PCDHGB1-201ENST00000523390 MUC21A0A140T8X8 626 aa10.67□□□□□ -0.7
PCDHGB1-201ENST00000523390 TMEM50AO95807 157 aa10.67□□□□□ -0.7
PCDHGB1-201ENST00000523390 MUC21Q5SSG8 566 aa10.67□□□□□ -0.7
PCDHGB1-201ENST00000523390 GSX1Q9H4S2 264 aaPredicted RBP10.67□□□□□ -0.7
PCDHGB1-201ENST00000523390 BRCA2P51587 3418 aa10.67□□□□□ -0.7
PCDHGB1-201ENST00000523390 IGF2-ASQ6U949 168 aa10.67□□□□□ -0.7
PCDHGB1-201ENST00000523390 ZNF600Q6ZNG1 722 aa10.67□□□□□ -0.7
PCDHGB1-201ENST00000523390 MUC22E2RYF6 1773 aaPredicted RBP10.67□□□□□ -0.7
PCDHGB1-201ENST00000523390 UBE2CO00762 179 aa10.67□□□□□ -0.7
PCDHGB1-201ENST00000523390 C3orf36Q3SXR2 165 aa10.67□□□□□ -0.7
PCDHGB1-201ENST00000523390 YAE1D1Q9NRH1 226 aa10.67□□□□□ -0.7
PCDHGB1-201ENST00000523390 A0A0C4DFX4 3053 aa10.67□□□□□ -0.7
PCDHGB1-201ENST00000523390 MMP23AO75900 390 aa10.67□□□□□ -0.7
PCDHGB1-201ENST00000523390 GCGP01275 180 aa10.67□□□□□ -0.7
PCDHGB1-201ENST00000523390 FOXA3P55318 350 aaPredicted RBP10.67□□□□□ -0.7
PCDHGB1-201ENST00000523390 MGST2Q99735 147 aa10.67□□□□□ -0.7
PCDHGB1-201ENST00000523390 MAP1LC3CQ9BXW4 147 aa10.67□□□□□ -0.7
PCDHGB1-201ENST00000523390 CD99P14209 185 aa10.66□□□□□ -0.7
PCDHGB1-201ENST00000523390 TMEM155Q4W5P6 130 aa10.66□□□□□ -0.7
PCDHGB1-201ENST00000523390 SEPSECSQ9HD40 501 aaKnown RBP10.66□□□□□ -0.7
PCDHGB1-201ENST00000523390 SIGLEC9Q9Y336 463 aa10.66□□□□□ -0.7
PCDHGB1-201ENST00000523390 DMRT1Q9Y5R6 373 aa10.66□□□□□ -0.7
PCDHGB1-201ENST00000523390 AREGP15514 252 aa10.66□□□□□ -0.7
PCDHGB1-201ENST00000523390 Q8TCH9 128 aa10.66□□□□□ -0.7
PCDHGB1-201ENST00000523390 TBX15Q96SF7 602 aa10.66□□□□□ -0.7
PCDHGB1-201ENST00000523390 IMMP2LQ96T52 175 aa10.66□□□□□ -0.7
PCDHGB1-201ENST00000523390 EML6Q6ZMW3 1958 aa10.66□□□□□ -0.7
PCDHGB1-201ENST00000523390 SAPCD1Q5SSQ6 148 aa10.66□□□□□ -0.7
PCDHGB1-201ENST00000523390 GFI1BQ5VTD9 330 aa10.66□□□□□ -0.7
PCDHGB1-201ENST00000523390 PVRIGQ6DKI7 326 aa10.66□□□□□ -0.7
PCDHGB1-201ENST00000523390 RNASE7Q9H1E1 156 aaKnown RBP10.66□□□□□ -0.7
PCDHGB1-201ENST00000523390 PHLDA3Q9Y5J5 127 aa10.66□□□□□ -0.7
PCDHGB1-201ENST00000523390 DIRC3C9JPN6 131 aa10.65□□□□□ -0.7
PCDHGB1-201ENST00000523390 GGCTO75223 188 aaKnown RBP10.65□□□□□ -0.7
PCDHGB1-201ENST00000523390 IGKV1-39P01597 117 aa10.65□□□□□ -0.7
PCDHGB1-201ENST00000523390 IGKV1D-39P04432 117 aa10.65□□□□□ -0.7
PCDHGB1-201ENST00000523390 LYL1P12980 280 aa10.65□□□□□ -0.7
PCDHGB1-201ENST00000523390 LOXP28300 417 aaPredicted RBP10.65□□□□□ -0.7
PCDHGB1-201ENST00000523390 C5orf64Q2M2E5 130 aa10.65□□□□□ -0.7
PCDHGB1-201ENST00000523390 NAV2Q8IVL1 2488 aa10.65□□□□□ -0.7
PCDHGB1-201ENST00000523390 MED12LQ86YW9 2145 aa10.65□□□□□ -0.7
PCDHGB1-201ENST00000523390 H3BUX3 64 aa10.65□□□□□ -0.7
PCDHGB1-201ENST00000523390 STAG3L2P0CL84 134 aa10.65□□□□□ -0.7
PCDHGB1-201ENST00000523390 STAG3L3P0CL85 134 aa10.65□□□□□ -0.7
PCDHGB1-201ENST00000523390 CFHR2P36980 270 aa10.65□□□□□ -0.7
PCDHGB1-201ENST00000523390 TCTAP57738 103 aa10.65□□□□□ -0.7
PCDHGB1-201ENST00000523390 C17orf58Q2M2W7 97 aa10.65□□□□□ -0.7
PCDHGB1-201ENST00000523390 CHD8Q9HCK8 2581 aa10.65□□□□□ -0.7
PCDHGB1-201ENST00000523390 M0R1W7 72 aa10.65□□□□□ -0.71
PCDHGB1-201ENST00000523390 PSG1P11464 419 aa10.65□□□□□ -0.71
PCDHGB1-201ENST00000523390 PRTN3P24158 256 aa10.65□□□□□ -0.71
PCDHGB1-201ENST00000523390 DUX5Q96PT3 197 aa10.65□□□□□ -0.71
PCDHGB1-201ENST00000523390 CEP192Q8TEP8 1941 aa10.65□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms