RNA–Protein interactions for RNA: ENST00000523261.1

NKX3-1-202, Transcript of NK3 homeobox 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NKX3-1, Length 713 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-1-202ENST00000523261 OR4X1Q8NH49 305 aa9.45□□□□□ -0.9
NKX3-1-202ENST00000523261 LINC00052Q96N35 136 aa9.45□□□□□ -0.9
NKX3-1-202ENST00000523261 F6UB75 175 aa9.44□□□□□ -0.9
NKX3-1-202ENST00000523261 BUB3O43684 328 aa9.44□□□□□ -0.9
NKX3-1-202ENST00000523261 RLN1P04808 185 aa9.44□□□□□ -0.9
NKX3-1-202ENST00000523261 SPATA31B1PQ5VZV4 182 aa9.44□□□□□ -0.9
NKX3-1-202ENST00000523261 TMEM17Q86X19 198 aa9.44□□□□□ -0.9
NKX3-1-202ENST00000523261 PQLC1Q8N2U9 271 aa9.44□□□□□ -0.9
NKX3-1-202ENST00000523261 LSM2Q9Y333 95 aaKnown RBP9.44□□□□□ -0.9
NKX3-1-202ENST00000523261 DNAH8Q96JB1 4490 aa9.44□□□□□ -0.9
NKX3-1-202ENST00000523261 LRP2P98164 4655 aa9.44□□□□□ -0.9
NKX3-1-202ENST00000523261 A0A0J9YY99 117 aa9.43□□□□□ -0.9
NKX3-1-202ENST00000523261 IFITM5A6NNB3 132 aa9.43□□□□□ -0.9
NKX3-1-202ENST00000523261 SIVA1O15304 175 aa9.43□□□□□ -0.9
NKX3-1-202ENST00000523261 AZU1P20160 251 aa9.43□□□□□ -0.9
NKX3-1-202ENST00000523261 M6PRP20645 277 aa9.43□□□□□ -0.9
NKX3-1-202ENST00000523261 OR10A3P58181 314 aa9.43□□□□□ -0.9
NKX3-1-202ENST00000523261 GNG2P59768 71 aa9.43□□□□□ -0.9
NKX3-1-202ENST00000523261 HSPE1P61604 102 aaKnown RBP9.43□□□□□ -0.9
NKX3-1-202ENST00000523261 RPS25P62851 125 aaKnown RBP9.43□□□□□ -0.9
NKX3-1-202ENST00000523261 OR5I1Q13606 314 aa9.43□□□□□ -0.9
NKX3-1-202ENST00000523261 SPHARQ15513 63 aa9.43□□□□□ -0.9
NKX3-1-202ENST00000523261 MLANAQ16655 118 aa9.43□□□□□ -0.9
NKX3-1-202ENST00000523261 AMTNQ6UX39 209 aa9.43□□□□□ -0.9
NKX3-1-202ENST00000523261 NFE4Q86UQ8 179 aa9.43□□□□□ -0.9
NKX3-1-202ENST00000523261 ABHD1Q96SE0 405 aa9.43□□□□□ -0.9
NKX3-1-202ENST00000523261 MND1Q9BWT6 205 aa9.43□□□□□ -0.9
NKX3-1-202ENST00000523261 WDR12Q9GZL7 423 aaKnown RBP9.43□□□□□ -0.9
NKX3-1-202ENST00000523261 A0A0J9YX75 114 aa9.42□□□□□ -0.9
NKX3-1-202ENST00000523261 SCGB2A1O75556 95 aa9.42□□□□□ -0.9
NKX3-1-202ENST00000523261 PGLYRP1O75594 196 aaPredicted RBP9.42□□□□□ -0.9
NKX3-1-202ENST00000523261 PSMB3P49720 205 aa9.42□□□□□ -0.9
NKX3-1-202ENST00000523261 RASSF2P50749 326 aa9.42□□□□□ -0.9
NKX3-1-202ENST00000523261 SPINK9Q5DT21 86 aa9.42□□□□□ -0.9
NKX3-1-202ENST00000523261 BEST4Q8NFU0 473 aa9.42□□□□□ -0.9
NKX3-1-202ENST00000523261 PLCXD1Q9NUJ7 323 aa9.42□□□□□ -0.9
NKX3-1-202ENST00000523261 FKBP14Q9NWM8 211 aa9.42□□□□□ -0.9
NKX3-1-202ENST00000523261 IGLV5-52A0A0A0MRZ9 124 aa9.41□□□□□ -0.9
NKX3-1-202ENST00000523261 A8MTW9 85 aa9.41□□□□□ -0.9
NKX3-1-202ENST00000523261 ZNF701M0R085 212 aaPredicted RBP9.41□□□□□ -0.9
NKX3-1-202ENST00000523261 CORTO00230 105 aa9.41□□□□□ -0.9
NKX3-1-202ENST00000523261 CIB2O75838 187 aa9.41□□□□□ -0.9
NKX3-1-202ENST00000523261 SNCAP37840 140 aa9.41□□□□□ -0.9
NKX3-1-202ENST00000523261 ID1P41134 155 aa9.41□□□□□ -0.9
NKX3-1-202ENST00000523261 ZFP1Q6P2D0 407 aa9.41□□□□□ -0.9
NKX3-1-202ENST00000523261 EBLN2Q6P2I7 272 aa9.41□□□□□ -0.9
NKX3-1-202ENST00000523261 TSPAN14Q8NG11 270 aa9.41□□□□□ -0.9
NKX3-1-202ENST00000523261 OR4A16Q8NH70 328 aa9.41□□□□□ -0.9
NKX3-1-202ENST00000523261 COQ8AQ8NI60 647 aa9.41□□□□□ -0.9
NKX3-1-202ENST00000523261 UFD1Q92890 307 aa9.41□□□□□ -0.9
NKX3-1-202ENST00000523261 DAPK2Q9UIK4 370 aa9.41□□□□□ -0.9
NKX3-1-202ENST00000523261 TRAV30A0A087WSZ9 112 aa9.4□□□□□ -0.9
NKX3-1-202ENST00000523261 H3BNG1 76 aa9.4□□□□□ -0.9
NKX3-1-202ENST00000523261 SOCS3O14543 225 aa9.4□□□□□ -0.9
NKX3-1-202ENST00000523261 CRXO43186 299 aaPredicted RBP9.4□□□□□ -0.9
NKX3-1-202ENST00000523261 IGLC1P0CG04 106 aa9.4□□□□□ -0.9
NKX3-1-202ENST00000523261 RNASE2P10153 161 aaKnown RBP9.4□□□□□ -0.9
NKX3-1-202ENST00000523261 OPRK1P41145 380 aa9.4□□□□□ -0.9
NKX3-1-202ENST00000523261 KRTAP10-4P60372 401 aaPredicted RBP9.4□□□□□ -0.9
NKX3-1-202ENST00000523261 DHODHQ02127 395 aa9.4□□□□□ -0.9
NKX3-1-202ENST00000523261 Q8WTZ3 238 aa9.4□□□□□ -0.9
NKX3-1-202ENST00000523261 CYGBQ8WWM9 190 aa9.4□□□□□ -0.9
NKX3-1-202ENST00000523261 BORCS5Q969J3 196 aa9.4□□□□□ -0.9
NKX3-1-202ENST00000523261 SEC22AQ96IW7 307 aa9.4□□□□□ -0.9
NKX3-1-202ENST00000523261 PKHD1L1Q86WI1 4243 aa9.4□□□□□ -0.91
NKX3-1-202ENST00000523261 INS-IGF2F8WCM5 200 aa9.39□□□□□ -0.91
NKX3-1-202ENST00000523261 GSTZ1O43708 216 aaPredicted RBP9.39□□□□□ -0.91
NKX3-1-202ENST00000523261 INSP01308 110 aa9.39□□□□□ -0.91
NKX3-1-202ENST00000523261 HOXA5P20719 270 aa9.39□□□□□ -0.91
NKX3-1-202ENST00000523261 B2MP61769 119 aa9.39□□□□□ -0.91
NKX3-1-202ENST00000523261 FABP5Q01469 135 aa9.39□□□□□ -0.91
NKX3-1-202ENST00000523261 TRAM1Q15629 374 aa9.39□□□□□ -0.91
NKX3-1-202ENST00000523261 CCDC90BQ9GZT6 254 aa9.39□□□□□ -0.91
NKX3-1-202ENST00000523261 KLK11Q9UBX7 282 aa9.39□□□□□ -0.91
NKX3-1-202ENST00000523261 M0R2Z0 102 aa9.38□□□□□ -0.91
NKX3-1-202ENST00000523261 CASQ2O14958 399 aaPredicted RBP9.38□□□□□ -0.91
NKX3-1-202ENST00000523261 IL4P05112 153 aa9.38□□□□□ -0.91
NKX3-1-202ENST00000523261 PSMA1P25786 263 aaKnown RBP9.38□□□□□ -0.91
NKX3-1-202ENST00000523261 RPL5P46777 297 aaKnown RBP9.38□□□□□ -0.91
NKX3-1-202ENST00000523261 YPEL3P61236 119 aaPredicted RBP9.38□□□□□ -0.91
NKX3-1-202ENST00000523261 SPINK13Q1W4C9 94 aa9.38□□□□□ -0.91
NKX3-1-202ENST00000523261 H2BFWTQ7Z2G1 175 aa9.38□□□□□ -0.91
NKX3-1-202ENST00000523261 HOGA1Q86XE5 327 aa9.38□□□□□ -0.91
NKX3-1-202ENST00000523261 OR1S2Q8NGQ3 325 aa9.38□□□□□ -0.91
NKX3-1-202ENST00000523261 OR10J6PQ8NGY7 276 aa9.38□□□□□ -0.91
NKX3-1-202ENST00000523261 GPR146Q96CH1 333 aa9.38□□□□□ -0.91
NKX3-1-202ENST00000523261 DOK5Q9P104 306 aa9.38□□□□□ -0.91
NKX3-1-202ENST00000523261 TIMM8BQ9Y5J9 83 aaPredicted RBP9.38□□□□□ -0.91
NKX3-1-202ENST00000523261 PDCD5O14737 125 aa9.37□□□□□ -0.91
NKX3-1-202ENST00000523261 IGKV1-39P01597 117 aa9.37□□□□□ -0.91
NKX3-1-202ENST00000523261 C1QBP02746 253 aa9.37□□□□□ -0.91
NKX3-1-202ENST00000523261 IGKV1D-39P04432 117 aa9.37□□□□□ -0.91
NKX3-1-202ENST00000523261 ELK1P19419 428 aa9.37□□□□□ -0.91
NKX3-1-202ENST00000523261 SUB1P53999 127 aaKnown RBP eCLIP9.37□□□□□ -0.91
NKX3-1-202ENST00000523261 HERV-K104P61576 105 aa9.37□□□□□ -0.91
NKX3-1-202ENST00000523261 OR6F1Q8NGZ6 308 aa9.37□□□□□ -0.91
NKX3-1-202ENST00000523261 NTN5Q8WTR8 489 aaPredicted RBP9.37□□□□□ -0.91
NKX3-1-202ENST00000523261 A0A096LPF7 62 aa9.36□□□□□ -0.91
NKX3-1-202ENST00000523261 TRAV1-2A0A0B4J238 106 aa9.36□□□□□ -0.91
NKX3-1-202ENST00000523261 ISLRO14498 428 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 122.4 ms