RNA–Protein interactions for RNA: ENST00000523062.1

CSMD1-211, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 3

Gene CSMD1, Length 764 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-211ENST00000523062 PAX6P26367 422 aa5.43□□□□□ -1.54
CSMD1-211ENST00000523062 GCHFRP30047 84 aa5.43□□□□□ -1.54
CSMD1-211ENST00000523062 MFAP2P55001 183 aa5.43□□□□□ -1.54
CSMD1-211ENST00000523062 TAS2R45P59539 299 aa5.43□□□□□ -1.54
CSMD1-211ENST00000523062 BPIFB3P59826 476 aa5.43□□□□□ -1.54
CSMD1-211ENST00000523062 CD81P60033 236 aa5.43□□□□□ -1.54
CSMD1-211ENST00000523062 CLEC12BQ2HXU8 276 aa5.43□□□□□ -1.54
CSMD1-211ENST00000523062 AKIRIN2Q53H80 203 aa5.43□□□□□ -1.54
CSMD1-211ENST00000523062 SPATA31B1PQ5VZV4 182 aa5.43□□□□□ -1.54
CSMD1-211ENST00000523062 FAM90A2PQ658T7 463 aa5.43□□□□□ -1.54
CSMD1-211ENST00000523062 CTRB2Q6GPI1 263 aa5.43□□□□□ -1.54
CSMD1-211ENST00000523062 ZNF562Q6V9R5 426 aa5.43□□□□□ -1.54
CSMD1-211ENST00000523062 SPNS3Q6ZMD2 512 aa5.43□□□□□ -1.54
CSMD1-211ENST00000523062 PQLC2Q6ZP29 291 aa5.43□□□□□ -1.54
CSMD1-211ENST00000523062 CBLN2Q8IUK8 224 aa5.43□□□□□ -1.54
CSMD1-211ENST00000523062 TMEM116Q8NCL8 245 aa5.43□□□□□ -1.54
CSMD1-211ENST00000523062 OR1L4Q8NGR5 311 aa5.43□□□□□ -1.54
CSMD1-211ENST00000523062 GATAD1Q8WUU5 269 aa5.43□□□□□ -1.54
CSMD1-211ENST00000523062 ARPC1AQ92747 370 aa5.43□□□□□ -1.54
CSMD1-211ENST00000523062 TVP23CQ96ET8 276 aa5.43□□□□□ -1.54
CSMD1-211ENST00000523062 PFDN5Q99471 154 aa5.43□□□□□ -1.54
CSMD1-211ENST00000523062 TRGV9Q99603 122 aa5.43□□□□□ -1.54
CSMD1-211ENST00000523062 TXNDC17Q9BRA2 123 aa5.43□□□□□ -1.54
CSMD1-211ENST00000523062 SLC25A33Q9BSK2 321 aa5.43□□□□□ -1.54
CSMD1-211ENST00000523062 KRTAP3-1Q9BYR8 98 aa5.43□□□□□ -1.54
CSMD1-211ENST00000523062 RPS10P5Q9NQ39 176 aa5.43□□□□□ -1.54
CSMD1-211ENST00000523062 SMCO4Q9NRQ5 59 aa5.43□□□□□ -1.54
CSMD1-211ENST00000523062 BEX4Q9NWD9 120 aaPredicted RBP5.43□□□□□ -1.54
CSMD1-211ENST00000523062 TECRQ9NZ01 308 aaKnown RBP5.43□□□□□ -1.54
CSMD1-211ENST00000523062 ARL2-SNX15V9GYD0 113 aa5.43□□□□□ -1.54
CSMD1-211ENST00000523062 RELNP78509 3460 aa5.43□□□□□ -1.54
CSMD1-211ENST00000523062 WNK2Q9Y3S1 2297 aa5.43□□□□□ -1.54
CSMD1-211ENST00000523062 GCN1Q92616 2671 aaKnown RBP5.42□□□□□ -1.54
CSMD1-211ENST00000523062 NAV3Q8IVL0 2385 aa5.42□□□□□ -1.54
CSMD1-211ENST00000523062 MED13LQ71F56 2210 aa5.42□□□□□ -1.54
CSMD1-211ENST00000523062 IGKV1D-37A0A075B6S9 117 aa5.42□□□□□ -1.54
CSMD1-211ENST00000523062 TRAV20A0A0B4J274 112 aa5.42□□□□□ -1.54
CSMD1-211ENST00000523062 C7orf77A4D0Y5 90 aa5.42□□□□□ -1.54
CSMD1-211ENST00000523062 NPIPB5A8MRT5 1133 aa5.42□□□□□ -1.54
CSMD1-211ENST00000523062 B4DSR2 109 aa5.42□□□□□ -1.54
CSMD1-211ENST00000523062 C11orf94C9JXX5 98 aa5.42□□□□□ -1.54
CSMD1-211ENST00000523062 F6UZH7 168 aa5.42□□□□□ -1.54
CSMD1-211ENST00000523062 TSPAN4O14817 238 aa5.42□□□□□ -1.54
CSMD1-211ENST00000523062 NUPL2O15504 423 aaKnown RBP5.42□□□□□ -1.54
CSMD1-211ENST00000523062 PDE6DO43924 150 aa5.42□□□□□ -1.54
CSMD1-211ENST00000523062 COX7A2P2O60397 106 aa5.42□□□□□ -1.54
CSMD1-211ENST00000523062 CLN5O75503 358 aa5.42□□□□□ -1.54
CSMD1-211ENST00000523062 FABP1P07148 127 aa5.42□□□□□ -1.54
CSMD1-211ENST00000523062 GATA3P23771 443 aa5.42□□□□□ -1.54
CSMD1-211ENST00000523062 CX3CL1P78423 397 aa5.42□□□□□ -1.54
CSMD1-211ENST00000523062 PNRC1Q12796 327 aaPredicted RBP5.42□□□□□ -1.54
CSMD1-211ENST00000523062 FAM120AOSQ5T036 256 aa5.42□□□□□ -1.54
CSMD1-211ENST00000523062 FAM78BQ5VT40 261 aa5.42□□□□□ -1.54
CSMD1-211ENST00000523062 RUSC1-AS1Q66K80 236 aa5.42□□□□□ -1.54
CSMD1-211ENST00000523062 TMEM88Q6PEY1 159 aa5.42□□□□□ -1.54
CSMD1-211ENST00000523062 C19orf35Q6ZS72 473 aa5.42□□□□□ -1.54
CSMD1-211ENST00000523062 MIR17HGQ75NE6 70 aa5.42□□□□□ -1.54
CSMD1-211ENST00000523062 Q8N9W7 124 aa5.42□□□□□ -1.54
CSMD1-211ENST00000523062 OR4F5Q8NH21 305 aa5.42□□□□□ -1.54
CSMD1-211ENST00000523062 NRGNQ92686 78 aa5.42□□□□□ -1.54
CSMD1-211ENST00000523062 OR4F4Q96R69 305 aa5.42□□□□□ -1.54
CSMD1-211ENST00000523062 RASL11BQ9BPW5 248 aa5.42□□□□□ -1.54
CSMD1-211ENST00000523062 SEPSECSQ9HD40 501 aaKnown RBP5.42□□□□□ -1.54
CSMD1-211ENST00000523062 TMEM167BQ9NRX6 74 aa5.42□□□□□ -1.54
CSMD1-211ENST00000523062 TNFRSF19Q9NS68 423 aa5.42□□□□□ -1.54
CSMD1-211ENST00000523062 MRPL36Q9P0J6 103 aaKnown RBP5.42□□□□□ -1.54
CSMD1-211ENST00000523062 MYO18BQ8IUG5 2567 aa5.42□□□□□ -1.54
CSMD1-211ENST00000523062 A0A087WWC5 75 aa5.41□□□□□ -1.54
CSMD1-211ENST00000523062 IGHV7-81A0A0B4J1V7 117 aa5.41□□□□□ -1.54
CSMD1-211ENST00000523062 PSMB11A5LHX3 300 aa5.41□□□□□ -1.54
CSMD1-211ENST00000523062 ZNF727A8MUV8 499 aa5.41□□□□□ -1.54
CSMD1-211ENST00000523062 B4DEV8 164 aa5.41□□□□□ -1.54
CSMD1-211ENST00000523062 I3L2K1 104 aa5.41□□□□□ -1.54
CSMD1-211ENST00000523062 IGHV3-48P01763 117 aa5.41□□□□□ -1.54
CSMD1-211ENST00000523062 C8orf88P0DMB2 117 aa5.41□□□□□ -1.54
CSMD1-211ENST00000523062 GATA2P23769 480 aaPredicted RBP5.41□□□□□ -1.54
CSMD1-211ENST00000523062 UBE2G2P60604 165 aa5.41□□□□□ -1.54
CSMD1-211ENST00000523062 NDPQ00604 133 aa5.41□□□□□ -1.54
CSMD1-211ENST00000523062 C10orf113Q5VZT2 155 aa5.41□□□□□ -1.54
CSMD1-211ENST00000523062 CST9LP1Q5W188 147 aa5.41□□□□□ -1.54
CSMD1-211ENST00000523062 LRRC75A-AS1Q8N1F1 130 aa5.41□□□□□ -1.54
CSMD1-211ENST00000523062 TTC9CQ8N5M4 171 aa5.41□□□□□ -1.54
CSMD1-211ENST00000523062 OR4X1Q8NH49 305 aa5.41□□□□□ -1.54
CSMD1-211ENST00000523062 SMIM7Q9BQ49 75 aa5.41□□□□□ -1.54
CSMD1-211ENST00000523062 FAM103A1Q9BTL3 118 aaKnown RBP5.41□□□□□ -1.54
CSMD1-211ENST00000523062 C20orf24Q9BUV8 137 aa5.41□□□□□ -1.54
CSMD1-211ENST00000523062 DNAJC4Q9NNZ3 241 aa5.41□□□□□ -1.54
CSMD1-211ENST00000523062 NAT8Q9UHE5 227 aa5.41□□□□□ -1.54
CSMD1-211ENST00000523062 DMRT1Q9Y5R6 373 aa5.41□□□□□ -1.54
CSMD1-211ENST00000523062 PLXNB1O43157 2135 aa5.41□□□□□ -1.54
CSMD1-211ENST00000523062 IGLV11-55A0A075B6I3 123 aa5.4□□□□□ -1.54
CSMD1-211ENST00000523062 IGHV3OR16-10A0A075B7F0 116 aa5.4□□□□□ -1.54
CSMD1-211ENST00000523062 A0A096LNT2 108 aa5.4□□□□□ -1.54
CSMD1-211ENST00000523062 IGHV3-21A0A0B4J1V1 117 aa5.4□□□□□ -1.54
CSMD1-211ENST00000523062 J3QLI3 93 aa5.4□□□□□ -1.54
CSMD1-211ENST00000523062 K7EIM0 57 aa5.4□□□□□ -1.54
CSMD1-211ENST00000523062 OR7C2O60412 319 aa5.4□□□□□ -1.54
CSMD1-211ENST00000523062 SCGB2A1O75556 95 aa5.4□□□□□ -1.54
CSMD1-211ENST00000523062 IGLC1P0CG04 106 aa5.4□□□□□ -1.54
CSMD1-211ENST00000523062 HIST1H1BP16401 226 aaKnown RBP5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms