RNA–Protein interactions for RNA: ENST00000520846.1

MSR1-211, Transcript of macrophage scavenger receptor 1, human

TSL 4

Gene MSR1, Length 373 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MSR1-211	ENST00000520846	ZNF106	Q9H2Y7	1883 aa	Known RBP	0.67	□□□□□ -2.3
MSR1-211	ENST00000520846	TRBV6-8	A0A0A6YYG3	113 aa		0.67	□□□□□ -2.3
MSR1-211	ENST00000520846	C7orf71	A4D174	169 aa		0.67	□□□□□ -2.3
MSR1-211	ENST00000520846		M0R2N4	97 aa		0.67	□□□□□ -2.3
MSR1-211	ENST00000520846	LYZL6	O75951	148 aa		0.67	□□□□□ -2.3
MSR1-211	ENST00000520846	LYPLA2	O95372	231 aa		0.67	□□□□□ -2.3
MSR1-211	ENST00000520846	CNIH1	O95406	144 aa		0.67	□□□□□ -2.3
MSR1-211	ENST00000520846	RPS17	P08708	135 aa	Known RBP	0.67	□□□□□ -2.3
MSR1-211	ENST00000520846	OR4E1	P0C645	316 aa		0.67	□□□□□ -2.3
MSR1-211	ENST00000520846	LINC01554	Q52M75	96 aa		0.67	□□□□□ -2.3
MSR1-211	ENST00000520846	GDPD1	Q8N9F7	314 aa		0.67	□□□□□ -2.3
MSR1-211	ENST00000520846	OR52R1	Q8NGF1	315 aa		0.67	□□□□□ -2.3
MSR1-211	ENST00000520846	OR8J2	Q8NGG1	315 aa		0.67	□□□□□ -2.3
MSR1-211	ENST00000520846	OR10J5	Q8NHC4	309 aa		0.67	□□□□□ -2.3
MSR1-211	ENST00000520846	C2orf50	Q96LR7	162 aa		0.67	□□□□□ -2.3
MSR1-211	ENST00000520846	TRIM4	Q9C037	500 aa		0.67	□□□□□ -2.3
MSR1-211	ENST00000520846	DENND4C	Q5VZ89	1909 aa		0.67	□□□□□ -2.3
MSR1-211	ENST00000520846	SBF1	O95248	1867 aa		0.67	□□□□□ -2.3
MSR1-211	ENST00000520846		A0A087X0T9	212 aa		0.66	□□□□□ -2.3
MSR1-211	ENST00000520846	hADV38S2	A0JD32	116 aa		0.66	□□□□□ -2.3
MSR1-211	ENST00000520846	PPIB	P23284	216 aa	Known RBP	0.66	□□□□□ -2.3
MSR1-211	ENST00000520846	EDDM3A	Q14507	147 aa		0.66	□□□□□ -2.3
MSR1-211	ENST00000520846	C12orf74	Q32Q52	190 aa		0.66	□□□□□ -2.3
MSR1-211	ENST00000520846	GDF5OS	Q5U4N7	250 aa		0.66	□□□□□ -2.3
MSR1-211	ENST00000520846	C4orf3	Q8WVX3	66 aa		0.66	□□□□□ -2.3
MSR1-211	ENST00000520846	OR51V1	Q9H2C8	321 aa		0.66	□□□□□ -2.3
MSR1-211	ENST00000520846	CTNNBIP1	Q9NSA3	81 aa	Predicted RBP	0.66	□□□□□ -2.3
MSR1-211	ENST00000520846	NCOA1	Q15788	1441 aa		0.65	□□□□□ -2.3
MSR1-211	ENST00000520846	hCG_1818297	A0A087WSY0	165 aa		0.65	□□□□□ -2.31
MSR1-211	ENST00000520846		A0A087WUJ7	227 aa		0.65	□□□□□ -2.31
MSR1-211	ENST00000520846	TRAV3	A0A0B4J244	114 aa		0.65	□□□□□ -2.31
MSR1-211	ENST00000520846		A8MT66	165 aa		0.65	□□□□□ -2.31
MSR1-211	ENST00000520846	CLDN25	C9JDP6	229 aa		0.65	□□□□□ -2.31
MSR1-211	ENST00000520846		J3QRK9	145 aa		0.65	□□□□□ -2.31
MSR1-211	ENST00000520846	INE1	O15225	51 aa		0.65	□□□□□ -2.31
MSR1-211	ENST00000520846	ZNF682	O95780	498 aa		0.65	□□□□□ -2.31
MSR1-211	ENST00000520846	AP3S2	P59780	193 aa		0.65	□□□□□ -2.31
MSR1-211	ENST00000520846	CNBP	P62633	177 aa	Known RBP	0.65	□□□□□ -2.31
MSR1-211	ENST00000520846	HIST1H3A	P68431	136 aa		0.65	□□□□□ -2.31
MSR1-211	ENST00000520846	H3F3A	P84243	136 aa		0.65	□□□□□ -2.31
MSR1-211	ENST00000520846	AES	Q08117	197 aa		0.65	□□□□□ -2.31
MSR1-211	ENST00000520846	ITGB3BP	Q13352	177 aa	Predicted RBP	0.65	□□□□□ -2.31
MSR1-211	ENST00000520846	TSN	Q15631	228 aa	Known RBP	0.65	□□□□□ -2.31
MSR1-211	ENST00000520846	RGS21	Q2M5E4	152 aa		0.65	□□□□□ -2.31
MSR1-211	ENST00000520846	C1orf137	Q5JT78	98 aa		0.65	□□□□□ -2.31
MSR1-211	ENST00000520846	C12orf45	Q8N5I9	185 aa	Predicted RBP	0.65	□□□□□ -2.31
MSR1-211	ENST00000520846	TEX47	Q8TBZ9	253 aa		0.65	□□□□□ -2.31
MSR1-211	ENST00000520846	HIST1H2BL	Q99880	126 aa		0.65	□□□□□ -2.31
MSR1-211	ENST00000520846		V9GYY5	206 aa	Predicted RBP	0.65	□□□□□ -2.31
MSR1-211	ENST00000520846	TAF1L	Q8IZX4	1826 aa		0.65	□□□□□ -2.31
MSR1-211	ENST00000520846	PLB1	Q6P1J6	1458 aa		0.65	□□□□□ -2.31
MSR1-211	ENST00000520846	ADGRB2	O60241	1585 aa		0.65	□□□□□ -2.31
MSR1-211	ENST00000520846	SMIM9	A6NGZ8	99 aa		0.64	□□□□□ -2.31
MSR1-211	ENST00000520846	SERPINE1	P05121	402 aa		0.64	□□□□□ -2.31
MSR1-211	ENST00000520846	C8G	P07360	202 aa		0.64	□□□□□ -2.31
MSR1-211	ENST00000520846	ANP32A	P39687	249 aa	Known RBP	0.64	□□□□□ -2.31
MSR1-211	ENST00000520846	RAN	P62826	216 aa	Known RBP	0.64	□□□□□ -2.31
MSR1-211	ENST00000520846	ESRG	Q1W209	222 aa		0.64	□□□□□ -2.31
MSR1-211	ENST00000520846	DEFB113	Q30KQ7	82 aa		0.64	□□□□□ -2.31
MSR1-211	ENST00000520846	BRMS1L	Q5PSV4	323 aa		0.64	□□□□□ -2.31
MSR1-211	ENST00000520846	LCA10	Q71F78	164 aa		0.64	□□□□□ -2.31
MSR1-211	ENST00000520846	C3orf56	Q8N813	242 aa		0.64	□□□□□ -2.31
MSR1-211	ENST00000520846	LINC00301	Q8NCQ3	95 aa		0.64	□□□□□ -2.31
MSR1-211	ENST00000520846	OR8D4	Q8NGM9	314 aa		0.64	□□□□□ -2.31
MSR1-211	ENST00000520846	ITFG2	Q969R8	447 aa		0.64	□□□□□ -2.31
MSR1-211	ENST00000520846	PPP1R14B	Q96C90	147 aa		0.64	□□□□□ -2.31
MSR1-211	ENST00000520846	C6orf62	Q9GZU0	229 aa	Predicted RBP	0.64	□□□□□ -2.31
MSR1-211	ENST00000520846	C14orf105	Q9NVL8	296 aa		0.64	□□□□□ -2.31
MSR1-211	ENST00000520846	MED1	Q15648	1581 aa	Predicted RBP	0.64	□□□□□ -2.31
MSR1-211	ENST00000520846	EML5	Q05BV3	1969 aa		0.64	□□□□□ -2.31
MSR1-211	ENST00000520846	SNRNP200	O75643	2136 aa	Known RBP	0.64	□□□□□ -2.31
MSR1-211	ENST00000520846	PIK3C2G	O75747	1445 aa		0.64	□□□□□ -2.31
MSR1-211	ENST00000520846	RTL1	A6NKG5	1358 aa		0.63	□□□□□ -2.31
MSR1-211	ENST00000520846	CCDC160	A6NGH7	325 aa		0.63	□□□□□ -2.31
MSR1-211	ENST00000520846	C1orf196	B1AJZ1	125 aa		0.63	□□□□□ -2.31
MSR1-211	ENST00000520846	ZNF736	B4DX44	427 aa	Predicted RBP	0.63	□□□□□ -2.31
MSR1-211	ENST00000520846	PDE6D	O43924	150 aa		0.63	□□□□□ -2.31
MSR1-211	ENST00000520846	TCRB	P04435	133 aa		0.63	□□□□□ -2.31
MSR1-211	ENST00000520846	SMIM17	P0DL12	118 aa		0.63	□□□□□ -2.31
MSR1-211	ENST00000520846	LSM6	P62312	80 aa	Known RBP	0.63	□□□□□ -2.31
MSR1-211	ENST00000520846	RHOB	P62745	196 aa		0.63	□□□□□ -2.31
MSR1-211	ENST00000520846	MPV17L	Q2QL34	196 aa		0.63	□□□□□ -2.31
MSR1-211	ENST00000520846	TMEM97	Q5BJF2	176 aa		0.63	□□□□□ -2.31
MSR1-211	ENST00000520846	TEX261	Q6UWH6	196 aa		0.63	□□□□□ -2.31
MSR1-211	ENST00000520846	SOSTDC1	Q6X4U4	206 aa		0.63	□□□□□ -2.31
MSR1-211	ENST00000520846	OR2T10	Q8NGZ9	312 aa		0.63	□□□□□ -2.31
MSR1-211	ENST00000520846	FAM172A	Q8WUF8	416 aa		0.63	□□□□□ -2.31
MSR1-211	ENST00000520846	RNF122	Q9H9V4	155 aa		0.63	□□□□□ -2.31
MSR1-211	ENST00000520846	C14orf132	Q9NPU4	83 aa		0.63	□□□□□ -2.31
MSR1-211	ENST00000520846	CDC42SE1	Q9NRR8	79 aa		0.63	□□□□□ -2.31
MSR1-211	ENST00000520846	UQCC1	Q9NVA1	299 aa		0.63	□□□□□ -2.31
MSR1-211	ENST00000520846	TVP23B	Q9NYZ1	205 aa		0.63	□□□□□ -2.31
MSR1-211	ENST00000520846	UTP11	Q9Y3A2	253 aa	Known RBP	0.63	□□□□□ -2.31
MSR1-211	ENST00000520846	PRELID3B	Q9Y3B1	194 aa		0.63	□□□□□ -2.31
MSR1-211	ENST00000520846		U3KQ87	197 aa		0.63	□□□□□ -2.31
MSR1-211	ENST00000520846	SCN10A	Q9Y5Y9	1956 aa		0.63	□□□□□ -2.31
MSR1-211	ENST00000520846	MYO3B	Q8WXR4	1341 aa		0.63	□□□□□ -2.31
MSR1-211	ENST00000520846	CYB5B	O43169	146 aa		0.62	□□□□□ -2.31
MSR1-211	ENST00000520846	SRSF6	Q13247	344 aa	Known RBP	0.62	□□□□□ -2.31
MSR1-211	ENST00000520846		Q6Q795	121 aa		0.62	□□□□□ -2.31

Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms