RNA–Protein interactions for RNA: ENST00000517215.1

RNU6-1238P-201, Transcript of RNA, U6 small nuclear 1238, pseudogene, humanhuman

BASIC

Gene RNU6-1238P, Length 102 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1238P-201ENST00000517215 NIPSNAP1Q9BPW8 284 aa-2.03□□□□□ -2.73
RNU6-1238P-201ENST00000517215 UCK2Q9BZX2 261 aa-2.03□□□□□ -2.73
RNU6-1238P-201ENST00000517215 ASCL3Q9NQ33 180 aa-2.03□□□□□ -2.73
RNU6-1238P-201ENST00000517215 BATF3Q9NR55 127 aa-2.03□□□□□ -2.73
RNU6-1238P-201ENST00000517215 EMC3Q9P0I2 261 aa-2.03□□□□□ -2.73
RNU6-1238P-201ENST00000517215 ISY1Q9ULR0 285 aaKnown RBP-2.03□□□□□ -2.73
RNU6-1238P-201ENST00000517215 PRELID1Q9Y255 219 aa-2.03□□□□□ -2.73
RNU6-1238P-201ENST00000517215 S4R3F8 94 aa-2.03□□□□□ -2.73
RNU6-1238P-201ENST00000517215 DSPPQ9NZW4 1301 aa-2.03□□□□□ -2.73
RNU6-1238P-201ENST00000517215 FAM240BA0A1B0GVZ2 78 aa-2.04□□□□□ -2.74
RNU6-1238P-201ENST00000517215 SYCE3A1L190 88 aa-2.04□□□□□ -2.74
RNU6-1238P-201ENST00000517215 OR4C45A6NMZ5 311 aa-2.04□□□□□ -2.74
RNU6-1238P-201ENST00000517215 MYH7BA7E2Y1 1941 aa-2.04□□□□□ -2.74
RNU6-1238P-201ENST00000517215 TMEM14DPA8MWL7 114 aa-2.04□□□□□ -2.74
RNU6-1238P-201ENST00000517215 G3V318 75 aa-2.04□□□□□ -2.74
RNU6-1238P-201ENST00000517215 I3L521 148 aa-2.04□□□□□ -2.74
RNU6-1238P-201ENST00000517215 M0R381 172 aa-2.04□□□□□ -2.74
RNU6-1238P-201ENST00000517215 ZNF593O00488 134 aaPredicted RBP-2.04□□□□□ -2.74
RNU6-1238P-201ENST00000517215 MRASO14807 208 aa-2.04□□□□□ -2.74
RNU6-1238P-201ENST00000517215 LYRM1O43325 122 aa-2.04□□□□□ -2.74
RNU6-1238P-201ENST00000517215 KDELR3O43731 214 aa-2.04□□□□□ -2.74
RNU6-1238P-201ENST00000517215 IFNB1P01574 187 aa-2.04□□□□□ -2.74
RNU6-1238P-201ENST00000517215 SLC2A3P11169 496 aa-2.04□□□□□ -2.74
RNU6-1238P-201ENST00000517215 CCND2P30279 289 aa-2.04□□□□□ -2.74
RNU6-1238P-201ENST00000517215 CASQ1P31415 396 aa-2.04□□□□□ -2.74
RNU6-1238P-201ENST00000517215 GLRXP35754 106 aa-2.04□□□□□ -2.74
RNU6-1238P-201ENST00000517215 RAB13P51153 203 aa-2.04□□□□□ -2.74
RNU6-1238P-201ENST00000517215 BLMP54132 1417 aaPredicted RBP-2.04□□□□□ -2.74
RNU6-1238P-201ENST00000517215 TMEM33P57088 247 aa-2.04□□□□□ -2.74
RNU6-1238P-201ENST00000517215 SEC61GP60059 68 aa-2.04□□□□□ -2.74
RNU6-1238P-201ENST00000517215 RPL23AP62750 156 aaKnown RBP-2.04□□□□□ -2.74
RNU6-1238P-201ENST00000517215 H3F3AP84243 136 aa-2.04□□□□□ -2.74
RNU6-1238P-201ENST00000517215 BAXQ07812 192 aa-2.04□□□□□ -2.74
RNU6-1238P-201ENST00000517215 LRRC74AQ0VAA2 488 aa-2.04□□□□□ -2.74
RNU6-1238P-201ENST00000517215 HSDL1Q3SXM5 330 aa-2.04□□□□□ -2.74
RNU6-1238P-201ENST00000517215 SLC35D2Q76EJ3 337 aa-2.04□□□□□ -2.74
RNU6-1238P-201ENST00000517215 PHF5AQ7RTV0 110 aaKnown RBP-2.04□□□□□ -2.74
RNU6-1238P-201ENST00000517215 KATNAL2Q8IYT4 538 aa-2.04□□□□□ -2.74
RNU6-1238P-201ENST00000517215 C10orf53Q8N6V4 93 aa-2.04□□□□□ -2.74
RNU6-1238P-201ENST00000517215 SREK1IP1Q8N9Q2 155 aaPredicted RBP-2.04□□□□□ -2.74
RNU6-1238P-201ENST00000517215 OR7G1Q8NGA0 311 aa-2.04□□□□□ -2.74
RNU6-1238P-201ENST00000517215 OR52E4Q8NGH9 312 aa-2.04□□□□□ -2.74
RNU6-1238P-201ENST00000517215 OR5D14Q8NGL3 314 aa-2.04□□□□□ -2.74
RNU6-1238P-201ENST00000517215 GDAP1Q8TB36 358 aa-2.04□□□□□ -2.74
RNU6-1238P-201ENST00000517215 SLC37A2Q8TED4 501 aa-2.04□□□□□ -2.74
RNU6-1238P-201ENST00000517215 GPR146Q96CH1 333 aa-2.04□□□□□ -2.74
RNU6-1238P-201ENST00000517215 TRPM7Q96QT4 1865 aa-2.04□□□□□ -2.74
RNU6-1238P-201ENST00000517215 COPS4Q9BT78 406 aa-2.04□□□□□ -2.74
RNU6-1238P-201ENST00000517215 TMEM43Q9BTV4 400 aa-2.04□□□□□ -2.74
RNU6-1238P-201ENST00000517215 C1orf21Q9H246 121 aa-2.04□□□□□ -2.74
RNU6-1238P-201ENST00000517215 LYARQ9NX58 379 aaKnown RBP-2.04□□□□□ -2.74
RNU6-1238P-201ENST00000517215 CHRNA9Q9UGM1 479 aa-2.04□□□□□ -2.74
RNU6-1238P-201ENST00000517215 SNX10Q9Y5X0 201 aa-2.04□□□□□ -2.74
RNU6-1238P-201ENST00000517215 TOPBP1Q92547 1522 aa-2.05□□□□□ -2.74
RNU6-1238P-201ENST00000517215 MYO15BQ96JP2 1530 aa-2.05□□□□□ -2.74
RNU6-1238P-201ENST00000517215 CPDO75976 1380 aa-2.05□□□□□ -2.74
RNU6-1238P-201ENST00000517215 C1orf232A0A0U1RR37 186 aa-2.05□□□□□ -2.74
RNU6-1238P-201ENST00000517215 PCP4L1A6NKN8 68 aa-2.05□□□□□ -2.74
RNU6-1238P-201ENST00000517215 OR2AG2A6NM03 316 aa-2.05□□□□□ -2.74
RNU6-1238P-201ENST00000517215 CYTH3O43739 400 aa-2.05□□□□□ -2.74
RNU6-1238P-201ENST00000517215 HUS1O60921 280 aa-2.05□□□□□ -2.74
RNU6-1238P-201ENST00000517215 BRI3O95415 125 aa-2.05□□□□□ -2.74
RNU6-1238P-201ENST00000517215 CST1P01037 141 aa-2.05□□□□□ -2.74
RNU6-1238P-201ENST00000517215 MYL2P10916 166 aa-2.05□□□□□ -2.74
RNU6-1238P-201ENST00000517215 UGT2B7P16662 529 aa-2.05□□□□□ -2.74
RNU6-1238P-201ENST00000517215 ATP6V1C1P21283 382 aa-2.05□□□□□ -2.74
RNU6-1238P-201ENST00000517215 PSMB6P28072 239 aa-2.05□□□□□ -2.74
RNU6-1238P-201ENST00000517215 UBE2MP61081 183 aaKnown RBP-2.05□□□□□ -2.74
RNU6-1238P-201ENST00000517215 DEFB110Q30KQ9 67 aa-2.05□□□□□ -2.74
RNU6-1238P-201ENST00000517215 C18orf21Q32NC0 220 aaPredicted RBP-2.05□□□□□ -2.74
RNU6-1238P-201ENST00000517215 CTSL3PQ5NE16 218 aa-2.05□□□□□ -2.74
RNU6-1238P-201ENST00000517215 MIR17HGQ75NE6 70 aa-2.05□□□□□ -2.74
RNU6-1238P-201ENST00000517215 BPIFA4PQ86YQ2 179 aa-2.05□□□□□ -2.74
RNU6-1238P-201ENST00000517215 LSMEM1Q8N8F7 131 aa-2.05□□□□□ -2.74
RNU6-1238P-201ENST00000517215 GPR32P1Q8NGA4 272 aa-2.05□□□□□ -2.74
RNU6-1238P-201ENST00000517215 CLHC1Q8NHS4 586 aa-2.05□□□□□ -2.74
RNU6-1238P-201ENST00000517215 ANP32EQ9BTT0 268 aa-2.05□□□□□ -2.74
RNU6-1238P-201ENST00000517215 FAM192AQ9GZU8 254 aa-2.05□□□□□ -2.74
RNU6-1238P-201ENST00000517215 POPDC3Q9HBV1 291 aa-2.05□□□□□ -2.74
RNU6-1238P-201ENST00000517215 COA4Q9NYJ1 87 aa-2.05□□□□□ -2.74
RNU6-1238P-201ENST00000517215 NPATQ14207 1427 aa-2.06□□□□□ -2.74
RNU6-1238P-201ENST00000517215 NSD3Q9BZ95 1437 aa-2.06□□□□□ -2.74
RNU6-1238P-201ENST00000517215 TRAV12-2A0A075B6T6 113 aa-2.06□□□□□ -2.74
RNU6-1238P-201ENST00000517215 TRAV9-1A0A075B6T8 112 aa-2.06□□□□□ -2.74
RNU6-1238P-201ENST00000517215 A0A096LPI6 279 aa-2.06□□□□□ -2.74
RNU6-1238P-201ENST00000517215 GSTTP1A0A1W2PQM5 241 aa-2.06□□□□□ -2.74
RNU6-1238P-201ENST00000517215 H3BN98 237 aa-2.06□□□□□ -2.74
RNU6-1238P-201ENST00000517215 MKRN2OSH3BPM6 223 aa-2.06□□□□□ -2.74
RNU6-1238P-201ENST00000517215 GOLGA8TH3BQL2 631 aa-2.06□□□□□ -2.74
RNU6-1238P-201ENST00000517215 M0QYV0 167 aa-2.06□□□□□ -2.74
RNU6-1238P-201ENST00000517215 M0R2P5 195 aa-2.06□□□□□ -2.74
RNU6-1238P-201ENST00000517215 NPFFO15130 113 aa-2.06□□□□□ -2.74
RNU6-1238P-201ENST00000517215 SLC16A4O15374 487 aa-2.06□□□□□ -2.74
RNU6-1238P-201ENST00000517215 GADD45GO95257 159 aa-2.06□□□□□ -2.74
RNU6-1238P-201ENST00000517215 IFNW1P05000 195 aa-2.06□□□□□ -2.74
RNU6-1238P-201ENST00000517215 PYYP10082 97 aa-2.06□□□□□ -2.74
RNU6-1238P-201ENST00000517215 TNNI1P19237 187 aa-2.06□□□□□ -2.74
RNU6-1238P-201ENST00000517215 EIF2S2P20042 333 aaKnown RBP-2.06□□□□□ -2.74
RNU6-1238P-201ENST00000517215 UGT2B10P36537 528 aa-2.06□□□□□ -2.74
RNU6-1238P-201ENST00000517215 ELOF1P60002 83 aaKnown RBP-2.06□□□□□ -2.74
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms