RNA–Protein interactions for RNA: ENST00000511067.2

CHD1-206, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 817 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-206ENST00000511067 C8orf76Q96K31 380 aa1.94□□□□□ -2.1
CHD1-206ENST00000511067 ULBP3Q9BZM4 244 aa1.94□□□□□ -2.1
CHD1-206ENST00000511067 CYSTM1Q9H1C7 97 aa1.94□□□□□ -2.1
CHD1-206ENST00000511067 OR51V1Q9H2C8 321 aa1.94□□□□□ -2.1
CHD1-206ENST00000511067 PYCARDQ9ULZ3 195 aa1.94□□□□□ -2.1
CHD1-206ENST00000511067 BAIAP2Q9UQB8 552 aa1.94□□□□□ -2.1
CHD1-206ENST00000511067 PKIGQ9Y2B9 76 aa1.94□□□□□ -2.1
CHD1-206ENST00000511067 TMEM56-RWDD3S4R434 201 aa1.94□□□□□ -2.1
CHD1-206ENST00000511067 ERVK-7P63135 1459 aa1.94□□□□□ -2.1
CHD1-206ENST00000511067 ZNF518AQ6AHZ1 1483 aa1.94□□□□□ -2.1
CHD1-206ENST00000511067 NRXN1Q9ULB1 1477 aa1.94□□□□□ -2.1
CHD1-206ENST00000511067 YTHDC2Q9H6S0 1430 aaKnown RBP1.93□□□□□ -2.1
CHD1-206ENST00000511067 LMTK2Q8IWU2 1503 aa1.93□□□□□ -2.1
CHD1-206ENST00000511067 RIMBP3CA6NJZ7 1639 aa1.93□□□□□ -2.1
CHD1-206ENST00000511067 RIMBP3BA6NNM3 1639 aa1.93□□□□□ -2.1
CHD1-206ENST00000511067 TRAPPC13A5PLN9 417 aa1.93□□□□□ -2.1
CHD1-206ENST00000511067 OR4C46A6NHA9 309 aa1.93□□□□□ -2.1
CHD1-206ENST00000511067 IBA57-AS1B1ANH7 110 aa1.93□□□□□ -2.1
CHD1-206ENST00000511067 SDCBPO00560 298 aaPredicted RBP1.93□□□□□ -2.1
CHD1-206ENST00000511067 IGKV1-5P01602 117 aa1.93□□□□□ -2.1
CHD1-206ENST00000511067 TCRBP04435 133 aa1.93□□□□□ -2.1
CHD1-206ENST00000511067 RANP62826 216 aaKnown RBP1.93□□□□□ -2.1
CHD1-206ENST00000511067 SUPT4H1P63272 117 aaKnown RBP1.93□□□□□ -2.1
CHD1-206ENST00000511067 ELOBQ15370 118 aa1.93□□□□□ -2.1
CHD1-206ENST00000511067 KCNJ8Q15842 424 aa1.93□□□□□ -2.1
CHD1-206ENST00000511067 SPANXN3Q5MJ09 141 aa1.93□□□□□ -2.1
CHD1-206ENST00000511067 ANKRD29Q8N6D5 301 aa1.93□□□□□ -2.1
CHD1-206ENST00000511067 TOMM6Q96B49 74 aa1.93□□□□□ -2.1
CHD1-206ENST00000511067 Q96M85 177 aa1.93□□□□□ -2.1
CHD1-206ENST00000511067 TSPAN32Q96QS1 320 aa1.93□□□□□ -2.1
CHD1-206ENST00000511067 C20orf27Q9GZN8 174 aa1.93□□□□□ -2.1
CHD1-206ENST00000511067 SLC22A13Q9Y226 551 aa1.93□□□□□ -2.1
CHD1-206ENST00000511067 LHFPL6Q9Y693 200 aa1.93□□□□□ -2.1
CHD1-206ENST00000511067 FMN2Q9NZ56 1722 aa1.93□□□□□ -2.1
CHD1-206ENST00000511067 IFT140Q96RY7 1462 aa1.93□□□□□ -2.1
CHD1-206ENST00000511067 FANCD2Q9BXW9 1451 aa1.93□□□□□ -2.1
CHD1-206ENST00000511067 DIP2AQ14689 1571 aa1.93□□□□□ -2.1
CHD1-206ENST00000511067 SETBP1Q9Y6X0 1596 aa1.93□□□□□ -2.1
CHD1-206ENST00000511067 CD109Q6YHK3 1445 aa1.92□□□□□ -2.1
CHD1-206ENST00000511067 TRAPPC8Q9Y2L5 1435 aa1.92□□□□□ -2.1
CHD1-206ENST00000511067 AGLP35573 1532 aa1.92□□□□□ -2.1
CHD1-206ENST00000511067 ATP7AQ04656 1500 aa1.92□□□□□ -2.1
CHD1-206ENST00000511067 TULP4Q9NRJ4 1543 aa1.92□□□□□ -2.1
CHD1-206ENST00000511067 TMEM131LA2VDJ0 1609 aa1.92□□□□□ -2.1
CHD1-206ENST00000511067 RIMBP3Q9UFD9 1639 aa1.92□□□□□ -2.1
CHD1-206ENST00000511067 RGPD1P0DJD0 1748 aa1.92□□□□□ -2.1
CHD1-206ENST00000511067 LAMA4Q16363 1823 aa1.92□□□□□ -2.1
CHD1-206ENST00000511067 DOCK3Q8IZD9 2030 aa1.92□□□□□ -2.1
CHD1-206ENST00000511067 IGKV1D-43A0A0B4J1Z2 117 aa1.92□□□□□ -2.1
CHD1-206ENST00000511067 IFNA10P01566 189 aa1.92□□□□□ -2.1
CHD1-206ENST00000511067 EDDM3AQ14507 147 aa1.92□□□□□ -2.1
CHD1-206ENST00000511067 KRT222Q8N1A0 295 aa1.92□□□□□ -2.1
CHD1-206ENST00000511067 TMEM106AQ96A25 262 aa1.92□□□□□ -2.1
CHD1-206ENST00000511067 BORCS7Q96B45 105 aa1.92□□□□□ -2.1
CHD1-206ENST00000511067 MRPL32Q9BYC8 188 aaKnown RBP1.92□□□□□ -2.1
CHD1-206ENST00000511067 RTL1A6NKG5 1358 aa1.92□□□□□ -2.1
CHD1-206ENST00000511067 PIK3C2AO00443 1686 aa1.92□□□□□ -2.1
CHD1-206ENST00000511067 STRCQ7RTU9 1775 aa1.92□□□□□ -2.1
CHD1-206ENST00000511067 MYO5AQ9Y4I1 1855 aaKnown RBP1.92□□□□□ -2.1
CHD1-206ENST00000511067 PPIP5K1Q6PFW1 1433 aa1.91□□□□□ -2.1
CHD1-206ENST00000511067 ADGRL3Q9HAR2 1447 aa1.91□□□□□ -2.1
CHD1-206ENST00000511067 ZFYVE16Q7Z3T8 1539 aa1.91□□□□□ -2.1
CHD1-206ENST00000511067 SYCP2Q9BX26 1530 aa1.91□□□□□ -2.1
CHD1-206ENST00000511067 PIK3C2BO00750 1634 aa1.91□□□□□ -2.1
CHD1-206ENST00000511067 NALCNQ8IZF0 1738 aa1.91□□□□□ -2.1
CHD1-206ENST00000511067 SIPA1L2Q9P2F8 1722 aaPredicted RBP1.91□□□□□ -2.1
CHD1-206ENST00000511067 KIF1BO60333 1816 aa1.91□□□□□ -2.1
CHD1-206ENST00000511067 PLXND1Q9Y4D7 1925 aa1.91□□□□□ -2.1
CHD1-206ENST00000511067 ZNF106Q9H2Y7 1883 aaKnown RBP1.91□□□□□ -2.1
CHD1-206ENST00000511067 RIMS1Q86UR5 1692 aaKnown RBP1.91□□□□□ -2.1
CHD1-206ENST00000511067 CEP170BQ9Y4F5 1589 aaPredicted RBP1.91□□□□□ -2.1
CHD1-206ENST00000511067 CD163L1Q9NR16 1453 aa1.91□□□□□ -2.1
CHD1-206ENST00000511067 A0A087WUJ7 227 aa1.91□□□□□ -2.1
CHD1-206ENST00000511067 TRAV26-2A0A0B4J265 109 aa1.91□□□□□ -2.1
CHD1-206ENST00000511067 TRBV6-5A0A0K0K1A5 114 aa1.91□□□□□ -2.1
CHD1-206ENST00000511067 DPRXA6NFQ7 191 aa1.91□□□□□ -2.1
CHD1-206ENST00000511067 CRPP02741 224 aa1.91□□□□□ -2.1
CHD1-206ENST00000511067 RPSAP08865 295 aaKnown RBP1.91□□□□□ -2.1
CHD1-206ENST00000511067 CCL7P80098 99 aa1.91□□□□□ -2.1
CHD1-206ENST00000511067 SRSF6Q13247 344 aaKnown RBP1.91□□□□□ -2.1
CHD1-206ENST00000511067 KISS1Q15726 138 aa1.91□□□□□ -2.1
CHD1-206ENST00000511067 NNATQ16517 81 aa1.91□□□□□ -2.1
CHD1-206ENST00000511067 IAH1Q2TAA2 248 aaPredicted RBP1.91□□□□□ -2.1
CHD1-206ENST00000511067 FAM173BQ6P4H8 233 aa1.91□□□□□ -2.1
CHD1-206ENST00000511067 RPS19BP1Q86WX3 136 aaKnown RBP1.91□□□□□ -2.1
CHD1-206ENST00000511067 MON2Q7Z3U7 1717 aa1.91□□□□□ -2.1
CHD1-206ENST00000511067 TROQ12816 1431 aaPredicted RBP1.91□□□□□ -2.1
CHD1-206ENST00000511067 FAM135BQ49AJ0 1406 aa1.91□□□□□ -2.1
CHD1-206ENST00000511067 NWD1Q149M9 1564 aa1.9□□□□□ -2.1
CHD1-206ENST00000511067 ATP7BP35670 1465 aa1.9□□□□□ -2.11
CHD1-206ENST00000511067 MAGI1Q96QZ7 1491 aaPredicted RBP1.9□□□□□ -2.11
CHD1-206ENST00000511067 KIF24Q5T7B8 1368 aa1.9□□□□□ -2.11
CHD1-206ENST00000511067 MYH13Q9UKX3 1938 aa1.9□□□□□ -2.11
CHD1-206ENST00000511067 MAP2P11137 1827 aaKnown RBP1.9□□□□□ -2.11
CHD1-206ENST00000511067 TRAV9-1A0A075B6T8 112 aa1.9□□□□□ -2.11
CHD1-206ENST00000511067 EXOC1LA0A1B0GW35 172 aa1.9□□□□□ -2.11
CHD1-206ENST00000511067 IGKV2-29A2NJV5 120 aaPredicted RBP1.9□□□□□ -2.11
CHD1-206ENST00000511067 EIF2B2P49770 351 aaKnown RBP1.9□□□□□ -2.11
CHD1-206ENST00000511067 GTF2A1P52655 376 aaPredicted RBP1.9□□□□□ -2.11
CHD1-206ENST00000511067 RPS20P60866 119 aaKnown RBP1.9□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms