RNA–Protein interactions for RNA: ENST00000509429.1

NIPBL-206, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 3

Gene NIPBL, Length 586 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-206ENST00000509429 C1QAP02745 245 aa3.53□□□□□ -1.84
NIPBL-206ENST00000509429 SLC25A5P05141 298 aaKnown RBP3.53□□□□□ -1.84
NIPBL-206ENST00000509429 CRYGAP11844 174 aa3.53□□□□□ -1.84
NIPBL-206ENST00000509429 RND2P52198 227 aa3.53□□□□□ -1.84
NIPBL-206ENST00000509429 HERV-K104P61576 105 aa3.53□□□□□ -1.84
NIPBL-206ENST00000509429 PAX8Q06710 450 aa3.53□□□□□ -1.84
NIPBL-206ENST00000509429 RIGQ13278 110 aa3.53□□□□□ -1.84
NIPBL-206ENST00000509429 TGIF1Q15583 401 aa3.53□□□□□ -1.84
NIPBL-206ENST00000509429 Q56UQ5 140 aa3.53□□□□□ -1.84
NIPBL-206ENST00000509429 CENPWQ5EE01 88 aa3.53□□□□□ -1.84
NIPBL-206ENST00000509429 PIK3CD-AS1Q5SR53 167 aa3.53□□□□□ -1.84
NIPBL-206ENST00000509429 SLC25A30Q5SVS4 291 aa3.53□□□□□ -1.84
NIPBL-206ENST00000509429 ZNF57Q68EA5 555 aaPredicted RBP3.53□□□□□ -1.84
NIPBL-206ENST00000509429 ZNF324BQ6AW86 544 aaPredicted RBP3.53□□□□□ -1.84
NIPBL-206ENST00000509429 SCGB1D4Q6XE38 83 aa3.53□□□□□ -1.84
NIPBL-206ENST00000509429 ZNF709Q8N972 641 aa3.53□□□□□ -1.84
NIPBL-206ENST00000509429 OR10G8Q8NGN5 311 aa3.53□□□□□ -1.84
NIPBL-206ENST00000509429 OR52P1PQ8NH57 321 aa3.53□□□□□ -1.84
NIPBL-206ENST00000509429 OR51H1Q8NH63 302 aa3.53□□□□□ -1.84
NIPBL-206ENST00000509429 OSR1Q8TAX0 266 aaPredicted RBP3.53□□□□□ -1.84
NIPBL-206ENST00000509429 LMX1AQ8TE12 382 aa3.53□□□□□ -1.84
NIPBL-206ENST00000509429 TMEM230Q96A57 120 aa3.53□□□□□ -1.84
NIPBL-206ENST00000509429 C4orf45Q96LM5 186 aa3.53□□□□□ -1.84
NIPBL-206ENST00000509429 GPX7Q96SL4 187 aaPredicted RBP3.53□□□□□ -1.84
NIPBL-206ENST00000509429 TBL1YQ9BQ87 522 aa3.53□□□□□ -1.84
NIPBL-206ENST00000509429 PRSS27Q9BQR3 290 aa3.53□□□□□ -1.84
NIPBL-206ENST00000509429 PAXXQ9BUH6 204 aa3.53□□□□□ -1.84
NIPBL-206ENST00000509429 AGPAT4-IT1Q9H0P7 198 aa3.53□□□□□ -1.84
NIPBL-206ENST00000509429 NAA60Q9H7X0 242 aa3.53□□□□□ -1.84
NIPBL-206ENST00000509429 Q9HAA7 133 aa3.53□□□□□ -1.84
NIPBL-206ENST00000509429 RABAC1Q9UI14 185 aa3.53□□□□□ -1.84
NIPBL-206ENST00000509429 PCTPQ9UKL6 214 aa3.53□□□□□ -1.84
NIPBL-206ENST00000509429 PXMP4Q9Y6I8 212 aa3.53□□□□□ -1.84
NIPBL-206ENST00000509429 FNDC1Q4ZHG4 1894 aaPredicted RBP3.53□□□□□ -1.84
NIPBL-206ENST00000509429 SMCHD1A6NHR9 2005 aa3.53□□□□□ -1.84
NIPBL-206ENST00000509429 RLFQ13129 1914 aa3.52□□□□□ -1.85
NIPBL-206ENST00000509429 BRWD3Q6RI45 1802 aa3.52□□□□□ -1.85
NIPBL-206ENST00000509429 TRBV20-1A0A075B6N2 111 aa3.52□□□□□ -1.85
NIPBL-206ENST00000509429 A0A0J9YW62 118 aa3.52□□□□□ -1.85
NIPBL-206ENST00000509429 C3orf85A0A1B0GTC6 90 aa3.52□□□□□ -1.85
NIPBL-206ENST00000509429 WI2-2373I1.2A0A1W2PRP0 233 aa3.52□□□□□ -1.85
NIPBL-206ENST00000509429 FAM220BPB1ANY3 271 aa3.52□□□□□ -1.85
NIPBL-206ENST00000509429 PITX3O75364 302 aa3.52□□□□□ -1.85
NIPBL-206ENST00000509429 APOMO95445 188 aa3.52□□□□□ -1.85
NIPBL-206ENST00000509429 GYPAP02724 150 aa3.52□□□□□ -1.85
NIPBL-206ENST00000509429 CXCL1P09341 107 aa3.52□□□□□ -1.85
NIPBL-206ENST00000509429 OR9G9P0C7N8 305 aa3.52□□□□□ -1.85
NIPBL-206ENST00000509429 LINC00869P0C866 280 aa3.52□□□□□ -1.85
NIPBL-206ENST00000509429 PYYP10082 97 aa3.52□□□□□ -1.85
NIPBL-206ENST00000509429 MYCNOSP40205 109 aa3.52□□□□□ -1.85
NIPBL-206ENST00000509429 ASIPP42127 132 aa3.52□□□□□ -1.85
NIPBL-206ENST00000509429 SLC25A1P53007 311 aa3.52□□□□□ -1.85
NIPBL-206ENST00000509429 B3GALT5-AS1P59052 145 aa3.52□□□□□ -1.85
NIPBL-206ENST00000509429 ZNF345Q14585 488 aa3.52□□□□□ -1.85
NIPBL-206ENST00000509429 MSMO1Q15800 293 aa3.52□□□□□ -1.85
NIPBL-206ENST00000509429 SP6Q3SY56 376 aa3.52□□□□□ -1.85
NIPBL-206ENST00000509429 PYDC2Q56P42 97 aa3.52□□□□□ -1.85
NIPBL-206ENST00000509429 MRPL2Q5T653 305 aaKnown RBP3.52□□□□□ -1.85
NIPBL-206ENST00000509429 C9orf153Q5TBE3 101 aa3.52□□□□□ -1.85
NIPBL-206ENST00000509429 LCN8Q6JVE9 175 aa3.52□□□□□ -1.85
NIPBL-206ENST00000509429 C22orf39Q6P5X5 142 aa3.52□□□□□ -1.85
NIPBL-206ENST00000509429 Q6ZWC4 215 aa3.52□□□□□ -1.85
NIPBL-206ENST00000509429 MSRB3Q8IXL7 192 aa3.52□□□□□ -1.85
NIPBL-206ENST00000509429 OR10AC1Q8NH08 325 aa3.52□□□□□ -1.85
NIPBL-206ENST00000509429 OR10AG1Q8NH19 301 aa3.52□□□□□ -1.85
NIPBL-206ENST00000509429 OR52N5Q8NH56 324 aa3.52□□□□□ -1.85
NIPBL-206ENST00000509429 RPS4Y2Q8TD47 263 aa3.52□□□□□ -1.85
NIPBL-206ENST00000509429 IL1F10Q8WWZ1 152 aa3.52□□□□□ -1.85
NIPBL-206ENST00000509429 CCL17Q92583 94 aa3.52□□□□□ -1.85
NIPBL-206ENST00000509429 ZNF689Q96CS4 500 aaPredicted RBP3.52□□□□□ -1.85
NIPBL-206ENST00000509429 TM2D3Q9BRN9 247 aa3.52□□□□□ -1.85
NIPBL-206ENST00000509429 OVOL2Q9BRP0 275 aa3.52□□□□□ -1.85
NIPBL-206ENST00000509429 IMUPQ9GZP8 106 aa3.52□□□□□ -1.85
NIPBL-206ENST00000509429 DEFB127Q9H1M4 99 aa3.52□□□□□ -1.85
NIPBL-206ENST00000509429 NDUFB11Q9NX14 153 aa3.52□□□□□ -1.85
NIPBL-206ENST00000509429 TTC3P53804 2025 aa3.52□□□□□ -1.85
NIPBL-206ENST00000509429 CKAP5Q14008 2032 aa3.52□□□□□ -1.85
NIPBL-206ENST00000509429 PDCD11Q14690 1871 aaKnown RBP3.52□□□□□ -1.85
NIPBL-206ENST00000509429 PAPPA2Q9BXP8 1791 aa3.51□□□□□ -1.85
NIPBL-206ENST00000509429 TNRC6AQ8NDV7 1962 aaKnown RBP3.51□□□□□ -1.85
NIPBL-206ENST00000509429 NCKAP5O14513 1909 aa3.51□□□□□ -1.85
NIPBL-206ENST00000509429 TRAV12-2A0A075B6T6 113 aa3.51□□□□□ -1.85
NIPBL-206ENST00000509429 IGKV6D-21A0A0A0MT36 114 aa3.51□□□□□ -1.85
NIPBL-206ENST00000509429 TRAV13-1A0A0B4J241 112 aa3.51□□□□□ -1.85
NIPBL-206ENST00000509429 KANTRA0A1W2PQU2 76 aa3.51□□□□□ -1.85
NIPBL-206ENST00000509429 SNRPGP15A8MWD9 76 aa3.51□□□□□ -1.85
NIPBL-206ENST00000509429 OOSP1A8MZH6 123 aa3.51□□□□□ -1.85
NIPBL-206ENST00000509429 WNT9BO14905 357 aa3.51□□□□□ -1.85
NIPBL-206ENST00000509429 JTBO76095 146 aa3.51□□□□□ -1.85
NIPBL-206ENST00000509429 TRACP01848 142 aa3.51□□□□□ -1.85
NIPBL-206ENST00000509429 IL5P05113 134 aa3.51□□□□□ -1.85
NIPBL-206ENST00000509429 SDC2P34741 201 aa3.51□□□□□ -1.85
NIPBL-206ENST00000509429 OPRM1P35372 400 aa3.51□□□□□ -1.85
NIPBL-206ENST00000509429 INPP1P49441 399 aa3.51□□□□□ -1.85
NIPBL-206ENST00000509429 P2RX1P51575 399 aa3.51□□□□□ -1.85
NIPBL-206ENST00000509429 QRFPP83859 136 aa3.51□□□□□ -1.85
NIPBL-206ENST00000509429 HOXA4Q00056 320 aaPredicted RBP3.51□□□□□ -1.85
NIPBL-206ENST00000509429 FOXF1Q12946 379 aa3.51□□□□□ -1.85
NIPBL-206ENST00000509429 EBI3Q14213 229 aa3.51□□□□□ -1.85
NIPBL-206ENST00000509429 TMEM187Q14656 261 aa3.51□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms