RNA–Protein interactions for RNA: ENST00000505017.1

DEPDC1B-203, Transcript of DEP domain containing 1B, humanhuman

TSL 3

Gene DEPDC1B, Length 854 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-203ENST00000505017 RPL7L1Q6DKI1 246 aaKnown RBP3.8□□□□□ -1.8
DEPDC1B-203ENST00000505017 HSD17B13Q7Z5P4 300 aaPredicted RBP3.8□□□□□ -1.8
DEPDC1B-203ENST00000505017 PDZD9Q8IXQ8 264 aa3.8□□□□□ -1.8
DEPDC1B-203ENST00000505017 MMD2Q8IY49 270 aa3.8□□□□□ -1.8
DEPDC1B-203ENST00000505017 PNKDQ8N490 385 aa3.8□□□□□ -1.8
DEPDC1B-203ENST00000505017 OR5C1Q8NGR4 320 aa3.8□□□□□ -1.8
DEPDC1B-203ENST00000505017 OR1L8Q8NGR8 309 aa3.8□□□□□ -1.8
DEPDC1B-203ENST00000505017 ATP5SQ99766 215 aa3.8□□□□□ -1.8
DEPDC1B-203ENST00000505017 SRSF8Q9BRL6 282 aaKnown RBP3.8□□□□□ -1.8
DEPDC1B-203ENST00000505017 GINS3Q9BRX5 216 aa3.8□□□□□ -1.8
DEPDC1B-203ENST00000505017 MAGT1Q9H0U3 335 aa3.8□□□□□ -1.8
DEPDC1B-203ENST00000505017 ENY2Q9NPA8 101 aa3.8□□□□□ -1.8
DEPDC1B-203ENST00000505017 NUP50Q9UKX7 468 aa3.8□□□□□ -1.8
DEPDC1B-203ENST00000505017 AUP1Q9Y679 476 aa3.8□□□□□ -1.8
DEPDC1B-203ENST00000505017 DOPEY2Q9Y3R5 2298 aa3.8□□□□□ -1.8
DEPDC1B-203ENST00000505017 CHD6Q8TD26 2715 aa3.8□□□□□ -1.8
DEPDC1B-203ENST00000505017 TET2Q6N021 2002 aaPredicted RBP3.8□□□□□ -1.8
DEPDC1B-203ENST00000505017 COL12A1Q99715 3063 aa3.79□□□□□ -1.8
DEPDC1B-203ENST00000505017 B4DSR2 109 aa3.79□□□□□ -1.8
DEPDC1B-203ENST00000505017 FGF16O43320 207 aa3.79□□□□□ -1.8
DEPDC1B-203ENST00000505017 ATP6V1G1O75348 118 aa3.79□□□□□ -1.8
DEPDC1B-203ENST00000505017 MPDU1O75352 247 aa3.79□□□□□ -1.8
DEPDC1B-203ENST00000505017 IGLV2-23P01705 113 aa3.79□□□□□ -1.8
DEPDC1B-203ENST00000505017 IGKV1-16P04430 117 aa3.79□□□□□ -1.8
DEPDC1B-203ENST00000505017 SAA1P0DJI8 122 aaPredicted RBP3.79□□□□□ -1.8
DEPDC1B-203ENST00000505017 SPP1P10451 314 aa3.79□□□□□ -1.8
DEPDC1B-203ENST00000505017 IAPPP10997 89 aa3.79□□□□□ -1.8
DEPDC1B-203ENST00000505017 COX7A1P24310 79 aa3.79□□□□□ -1.8
DEPDC1B-203ENST00000505017 VDAC2P45880 294 aaPredicted RBP3.79□□□□□ -1.8
DEPDC1B-203ENST00000505017 SULT1A2P50226 295 aa3.79□□□□□ -1.8
DEPDC1B-203ENST00000505017 DYNLT3P51808 116 aa3.79□□□□□ -1.8
DEPDC1B-203ENST00000505017 BPIFB3P59826 476 aa3.79□□□□□ -1.8
DEPDC1B-203ENST00000505017 DLK1P80370 383 aa3.79□□□□□ -1.8
DEPDC1B-203ENST00000505017 PRCDQ00LT1 54 aa3.79□□□□□ -1.8
DEPDC1B-203ENST00000505017 SLC38A11Q08AI6 406 aa3.79□□□□□ -1.8
DEPDC1B-203ENST00000505017 EBI3Q14213 229 aa3.79□□□□□ -1.8
DEPDC1B-203ENST00000505017 SPANXN5Q5MJ07 72 aa3.79□□□□□ -1.8
DEPDC1B-203ENST00000505017 HCP5Q6MZN7 132 aa3.79□□□□□ -1.8
DEPDC1B-203ENST00000505017 ALKAL2Q6UX46 152 aa3.79□□□□□ -1.8
DEPDC1B-203ENST00000505017 DPPA3Q6W0C5 159 aa3.79□□□□□ -1.8
DEPDC1B-203ENST00000505017 SSX9Q7RTT3 188 aa3.79□□□□□ -1.8
DEPDC1B-203ENST00000505017 VMO1Q7Z5L0 202 aa3.79□□□□□ -1.8
DEPDC1B-203ENST00000505017 MOB3BQ86TA1 216 aa3.79□□□□□ -1.8
DEPDC1B-203ENST00000505017 OR10P1Q8NGE3 313 aa3.79□□□□□ -1.8
DEPDC1B-203ENST00000505017 SCGB1C1Q8TD33 95 aa3.79□□□□□ -1.8
DEPDC1B-203ENST00000505017 MALSU1Q96EH3 234 aa3.79□□□□□ -1.8
DEPDC1B-203ENST00000505017 TBX15Q96SF7 602 aa3.79□□□□□ -1.8
DEPDC1B-203ENST00000505017 PSMG3Q9BT73 122 aaPredicted RBP3.79□□□□□ -1.8
DEPDC1B-203ENST00000505017 TMEM147Q9BVK8 224 aa3.79□□□□□ -1.8
DEPDC1B-203ENST00000505017 COMMD5Q9GZQ3 224 aa3.79□□□□□ -1.8
DEPDC1B-203ENST00000505017 NARFLQ9H6Q4 476 aa3.79□□□□□ -1.8
DEPDC1B-203ENST00000505017 PLEKHA3Q9HB20 300 aa3.79□□□□□ -1.8
DEPDC1B-203ENST00000505017 SIRT7Q9NRC8 400 aa3.79□□□□□ -1.8
DEPDC1B-203ENST00000505017 KCNIP2Q9NS61 270 aa3.79□□□□□ -1.8
DEPDC1B-203ENST00000505017 TIMM9Q9Y5J7 89 aa3.79□□□□□ -1.8
DEPDC1B-203ENST00000505017 OR51B2Q9Y5P1 312 aa3.79□□□□□ -1.8
DEPDC1B-203ENST00000505017 ANKRD17O75179 2603 aaKnown RBP3.79□□□□□ -1.8
DEPDC1B-203ENST00000505017 LRBAP50851 2863 aa3.79□□□□□ -1.8
DEPDC1B-203ENST00000505017 CREBBPQ92793 2442 aa3.78□□□□□ -1.8
DEPDC1B-203ENST00000505017 ABCA2Q9BZC7 2435 aa3.78□□□□□ -1.8
DEPDC1B-203ENST00000505017 IGLV7-46A0A075B6I9 117 aa3.78□□□□□ -1.8
DEPDC1B-203ENST00000505017 IGHV4-30-2A0A087WSY4 118 aa3.78□□□□□ -1.8
DEPDC1B-203ENST00000505017 TRAV3A0A0B4J244 114 aa3.78□□□□□ -1.8
DEPDC1B-203ENST00000505017 TEX50A0A1B0GTY4 177 aa3.78□□□□□ -1.8
DEPDC1B-203ENST00000505017 RAB19A4D1S5 217 aa3.78□□□□□ -1.8
DEPDC1B-203ENST00000505017 SRRM4A7MD48 611 aaKnown RBP3.78□□□□□ -1.8
DEPDC1B-203ENST00000505017 RNASEK-C17orf49H0YIS7 233 aa3.78□□□□□ -1.8
DEPDC1B-203ENST00000505017 J3QLI3 93 aa3.78□□□□□ -1.8
DEPDC1B-203ENST00000505017 CST7O76096 145 aa3.78□□□□□ -1.8
DEPDC1B-203ENST00000505017 NDUFA3O95167 84 aa3.78□□□□□ -1.8
DEPDC1B-203ENST00000505017 VENTXO95231 258 aa3.78□□□□□ -1.8
DEPDC1B-203ENST00000505017 MOSP00540 346 aa3.78□□□□□ -1.8
DEPDC1B-203ENST00000505017 IFNA10P01566 189 aa3.78□□□□□ -1.8
DEPDC1B-203ENST00000505017 CRYGBP07316 175 aa3.78□□□□□ -1.8
DEPDC1B-203ENST00000505017 MSMBP08118 114 aa3.78□□□□□ -1.8
DEPDC1B-203ENST00000505017 METTL15P1P0C7V9 234 aa3.78□□□□□ -1.8
DEPDC1B-203ENST00000505017 NPY1RP25929 384 aa3.78□□□□□ -1.8
DEPDC1B-203ENST00000505017 BRS3P32247 399 aa3.78□□□□□ -1.8
DEPDC1B-203ENST00000505017 REG1BP48304 166 aa3.78□□□□□ -1.8
DEPDC1B-203ENST00000505017 SUB1P53999 127 aaKnown RBP eCLIP3.78□□□□□ -1.8
DEPDC1B-203ENST00000505017 OR2B8PP59922 312 aa3.78□□□□□ -1.8
DEPDC1B-203ENST00000505017 LCN2P80188 198 aa3.78□□□□□ -1.8
DEPDC1B-203ENST00000505017 ERHP84090 104 aaKnown RBP3.78□□□□□ -1.8
DEPDC1B-203ENST00000505017 SERF2P84101 59 aa3.78□□□□□ -1.8
DEPDC1B-203ENST00000505017 LOXL1Q08397 574 aaPredicted RBP3.78□□□□□ -1.8
DEPDC1B-203ENST00000505017 CLINT1Q14677 625 aa3.78□□□□□ -1.8
DEPDC1B-203ENST00000505017 PSG5Q15238 335 aa3.78□□□□□ -1.8
DEPDC1B-203ENST00000505017 PRSS8Q16651 343 aa3.78□□□□□ -1.8
DEPDC1B-203ENST00000505017 CLEC12BQ2HXU8 276 aa3.78□□□□□ -1.8
DEPDC1B-203ENST00000505017 VWC2Q2TAL6 325 aa3.78□□□□□ -1.8
DEPDC1B-203ENST00000505017 LRRC75BQ2VPJ9 315 aa3.78□□□□□ -1.8
DEPDC1B-203ENST00000505017 DEFB113Q30KQ7 82 aa3.78□□□□□ -1.8
DEPDC1B-203ENST00000505017 BSXQ3C1V8 233 aa3.78□□□□□ -1.8
DEPDC1B-203ENST00000505017 C2orf83Q53S99 150 aa3.78□□□□□ -1.8
DEPDC1B-203ENST00000505017 SLC25A24Q6NUK1 477 aa3.78□□□□□ -1.8
DEPDC1B-203ENST00000505017 CENPVQ7Z7K6 275 aaPredicted RBP3.78□□□□□ -1.8
DEPDC1B-203ENST00000505017 VKORC1L1Q8N0U8 176 aa3.78□□□□□ -1.8
DEPDC1B-203ENST00000505017 EIF4E3Q8N5X7 224 aaKnown RBP3.78□□□□□ -1.8
DEPDC1B-203ENST00000505017 COMMD1Q8N668 190 aa3.78□□□□□ -1.8
DEPDC1B-203ENST00000505017 LFNGQ8NES3 379 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms