RNA–Protein interactions for RNA: ENST00000498808.5

HDAC6-236, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-236ENST00000498808 IFT46Q9NQC8 304 aa10.92□□□□□ -0.66
HDAC6-236ENST00000498808 ANAPC10Q9UM13 185 aa10.92□□□□□ -0.66
HDAC6-236ENST00000498808 VPS13BQ7Z7G8 4022 aa10.92□□□□□ -0.66
HDAC6-236ENST00000498808 SCGB2A1O75556 95 aa10.91□□□□□ -0.66
HDAC6-236ENST00000498808 CLEC2LP0C7M8 214 aa10.91□□□□□ -0.66
HDAC6-236ENST00000498808 IGLC1P0CG04 106 aa10.91□□□□□ -0.66
HDAC6-236ENST00000498808 RPL5P46777 297 aaKnown RBP10.91□□□□□ -0.66
HDAC6-236ENST00000498808 ALDH3B2P48448 385 aa10.91□□□□□ -0.66
HDAC6-236ENST00000498808 HOXA1P49639 335 aaPredicted RBP10.91□□□□□ -0.66
HDAC6-236ENST00000498808 AQP4P55087 323 aa10.91□□□□□ -0.66
HDAC6-236ENST00000498808 SCAND1P57086 179 aa10.91□□□□□ -0.66
HDAC6-236ENST00000498808 RRN3P1Q2M238 152 aa10.91□□□□□ -0.66
HDAC6-236ENST00000498808 CLUHP3Q96NS8 147 aa10.91□□□□□ -0.66
HDAC6-236ENST00000498808 GOLT1BQ9Y3E0 138 aa10.91□□□□□ -0.66
HDAC6-236ENST00000498808 TRAV30A0A087WSZ9 112 aa10.9□□□□□ -0.66
HDAC6-236ENST00000498808 A0A0B4J293 547 aa10.9□□□□□ -0.66
HDAC6-236ENST00000498808 RPS10-NUDT3A0A1W2PQS6 291 aa10.9□□□□□ -0.66
HDAC6-236ENST00000498808 BUB3O43684 328 aa10.9□□□□□ -0.66
HDAC6-236ENST00000498808 NUDT3O95989 172 aa10.9□□□□□ -0.66
HDAC6-236ENST00000498808 BTF3P20290 206 aaKnown RBP10.9□□□□□ -0.66
HDAC6-236ENST00000498808 SUB1P53999 127 aaKnown RBP eCLIP10.9□□□□□ -0.66
HDAC6-236ENST00000498808 CCL18P55774 89 aa10.9□□□□□ -0.66
HDAC6-236ENST00000498808 DHODHQ02127 395 aa10.9□□□□□ -0.66
HDAC6-236ENST00000498808 FOXI2Q6ZQN5 318 aa10.9□□□□□ -0.66
HDAC6-236ENST00000498808 LYPD1Q8N2G4 141 aa10.9□□□□□ -0.66
HDAC6-236ENST00000498808 OR5H2Q8NGV7 314 aa10.9□□□□□ -0.66
HDAC6-236ENST00000498808 OR6F1Q8NGZ6 308 aa10.9□□□□□ -0.66
HDAC6-236ENST00000498808 Q8WTZ3 238 aa10.9□□□□□ -0.66
HDAC6-236ENST00000498808 DIABLOQ9NR28 239 aa10.9□□□□□ -0.66
HDAC6-236ENST00000498808 IGKV1-5P01602 117 aa10.89□□□□□ -0.67
HDAC6-236ENST00000498808 P0C879 139 aa10.89□□□□□ -0.67
HDAC6-236ENST00000498808 SDC2P34741 201 aa10.89□□□□□ -0.67
HDAC6-236ENST00000498808 ETV6P41212 452 aa10.89□□□□□ -0.67
HDAC6-236ENST00000498808 XGP55808 180 aa10.89□□□□□ -0.67
HDAC6-236ENST00000498808 ZNF79Q15937 498 aa10.89□□□□□ -0.67
HDAC6-236ENST00000498808 BSXQ3C1V8 233 aa10.89□□□□□ -0.67
HDAC6-236ENST00000498808 Q5VSD8 79 aa10.89□□□□□ -0.67
HDAC6-236ENST00000498808 OR4B1Q8NGF8 309 aa10.89□□□□□ -0.67
HDAC6-236ENST00000498808 OR1S2Q8NGQ3 325 aa10.89□□□□□ -0.67
HDAC6-236ENST00000498808 C7orf50Q9BRJ6 194 aaKnown RBP10.89□□□□□ -0.67
HDAC6-236ENST00000498808 IL4P05112 153 aa10.88□□□□□ -0.67
HDAC6-236ENST00000498808 NAT1P18440 290 aa10.88□□□□□ -0.67
HDAC6-236ENST00000498808 RND2P52198 227 aa10.88□□□□□ -0.67
HDAC6-236ENST00000498808 TAS2R46P59540 309 aa10.88□□□□□ -0.67
HDAC6-236ENST00000498808 YPEL3P61236 119 aaPredicted RBP10.88□□□□□ -0.67
HDAC6-236ENST00000498808 MXD1Q05195 221 aa10.88□□□□□ -0.67
HDAC6-236ENST00000498808 IDNKQ5T6J7 187 aa10.88□□□□□ -0.67
HDAC6-236ENST00000498808 LINC00052Q96N35 136 aa10.88□□□□□ -0.67
HDAC6-236ENST00000498808 WDR12Q9GZL7 423 aaKnown RBP10.88□□□□□ -0.67
HDAC6-236ENST00000498808 F5H768 121 aa10.87□□□□□ -0.67
HDAC6-236ENST00000498808 PRM2P04554 102 aa10.87□□□□□ -0.67
HDAC6-236ENST00000498808 S100GP29377 79 aa10.87□□□□□ -0.67
HDAC6-236ENST00000498808 OR10J1P30954 320 aa10.87□□□□□ -0.67
HDAC6-236ENST00000498808 HRH1P35367 487 aa10.87□□□□□ -0.67
HDAC6-236ENST00000498808 RORCP51449 518 aa10.87□□□□□ -0.67
HDAC6-236ENST00000498808 TAS2R20P59543 309 aa10.87□□□□□ -0.67
HDAC6-236ENST00000498808 PSG9Q00887 426 aa10.87□□□□□ -0.67
HDAC6-236ENST00000498808 PRSS54Q6PEW0 395 aa10.87□□□□□ -0.67
HDAC6-236ENST00000498808 SSX7Q7RTT5 188 aa10.87□□□□□ -0.67
HDAC6-236ENST00000498808 RNF141Q8WVD5 230 aa10.87□□□□□ -0.67
HDAC6-236ENST00000498808 Q9H8V8 135 aa10.87□□□□□ -0.67
HDAC6-236ENST00000498808 SCPEP1Q9HB40 452 aa10.87□□□□□ -0.67
HDAC6-236ENST00000498808 LYRM9A8MSI8 78 aa10.86□□□□□ -0.67
HDAC6-236ENST00000498808 F6UB75 175 aa10.86□□□□□ -0.67
HDAC6-236ENST00000498808 SOCS3O14543 225 aa10.86□□□□□ -0.67
HDAC6-236ENST00000498808 GSTZ1O43708 216 aaPredicted RBP10.86□□□□□ -0.67
HDAC6-236ENST00000498808 DEFB130BP0DP73 79 aa10.86□□□□□ -0.67
HDAC6-236ENST00000498808 DEFB130AP0DP74 79 aa10.86□□□□□ -0.67
HDAC6-236ENST00000498808 FAM78BQ5VT40 261 aa10.86□□□□□ -0.67
HDAC6-236ENST00000498808 LYSMD2Q8IV50 215 aa10.86□□□□□ -0.67
HDAC6-236ENST00000498808 MAGT1Q9H0U3 335 aa10.86□□□□□ -0.67
HDAC6-236ENST00000498808 NXPH3O95157 252 aa10.85□□□□□ -0.67
HDAC6-236ENST00000498808 HSPA13P48723 471 aa10.85□□□□□ -0.67
HDAC6-236ENST00000498808 PAX9P55771 341 aa10.85□□□□□ -0.67
HDAC6-236ENST00000498808 DLK1P80370 383 aa10.85□□□□□ -0.67
HDAC6-236ENST00000498808 TTC32Q5I0X7 151 aa10.85□□□□□ -0.67
HDAC6-236ENST00000498808 LPCAT3Q6P1A2 487 aa10.85□□□□□ -0.67
HDAC6-236ENST00000498808 C18orf15Q96N68 181 aa10.85□□□□□ -0.67
HDAC6-236ENST00000498808 PDCD10Q9BUL8 212 aa10.85□□□□□ -0.67
HDAC6-236ENST00000498808 Q9H3A6 140 aa10.85□□□□□ -0.67
HDAC6-236ENST00000498808 SSR3Q9UNL2 185 aa10.85□□□□□ -0.67
HDAC6-236ENST00000498808 A0A0G2JRQ6 117 aa10.84□□□□□ -0.67
HDAC6-236ENST00000498808 HLA-DMAP28067 261 aa10.84□□□□□ -0.67
HDAC6-236ENST00000498808 FUSP35637 526 aaKnown RBP eCLIP10.84□□□□□ -0.67
HDAC6-236ENST00000498808 PSMB3P49720 205 aa10.84□□□□□ -0.67
HDAC6-236ENST00000498808 AKR1C2P52895 323 aa10.84□□□□□ -0.67
HDAC6-236ENST00000498808 SPATA31B1PQ5VZV4 182 aa10.84□□□□□ -0.67
HDAC6-236ENST00000498808 COQ8AQ8NI60 647 aa10.84□□□□□ -0.67
HDAC6-236ENST00000498808 NRG4Q8WWG1 115 aa10.84□□□□□ -0.67
HDAC6-236ENST00000498808 FRZBQ92765 325 aa10.84□□□□□ -0.67
HDAC6-236ENST00000498808 IGF2BP2-AS1Q96M15 143 aa10.84□□□□□ -0.67
HDAC6-236ENST00000498808 ENY2Q9NPA8 101 aa10.84□□□□□ -0.67
HDAC6-236ENST00000498808 KLK11Q9UBX7 282 aa10.84□□□□□ -0.67
HDAC6-236ENST00000498808 A0A0J9YX75 114 aa10.83□□□□□ -0.68
HDAC6-236ENST00000498808 PLAC8L1A1L4L8 177 aa10.83□□□□□ -0.68
HDAC6-236ENST00000498808 ZNF705GA8MUZ8 300 aaPredicted RBP10.83□□□□□ -0.68
HDAC6-236ENST00000498808 M0QYG6 137 aa10.83□□□□□ -0.68
HDAC6-236ENST00000498808 TOMM40O96008 361 aa10.83□□□□□ -0.68
HDAC6-236ENST00000498808 SLC25A4P12235 298 aa10.83□□□□□ -0.68
HDAC6-236ENST00000498808 PSMB9P28065 219 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms