RNA–Protein interactions for RNA: ENST00000494028.1

CLCN6-208, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 5

Gene CLCN6, Length 773 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-208ENST00000494028 PATE2Q6UY27 113 aa8.43□□□□□ -1.06
CLCN6-208ENST00000494028 C16orf82Q7Z2V1 217 aa8.43□□□□□ -1.06
CLCN6-208ENST00000494028 FAM24BQ8N5W8 94 aa8.43□□□□□ -1.06
CLCN6-208ENST00000494028 Q8N9W7 124 aa8.43□□□□□ -1.06
CLCN6-208ENST00000494028 OR5AU1Q8NGC0 362 aa8.43□□□□□ -1.06
CLCN6-208ENST00000494028 OR4X1Q8NH49 305 aa8.43□□□□□ -1.06
CLCN6-208ENST00000494028 MLXQ9UH92 298 aa8.43□□□□□ -1.06
CLCN6-208ENST00000494028 WNK2Q9Y3S1 2297 aa8.43□□□□□ -1.06
CLCN6-208ENST00000494028 TRBV20OR9-2A0A075B6H5 130 aa8.42□□□□□ -1.06
CLCN6-208ENST00000494028 IGLV11-55A0A075B6I3 123 aa8.42□□□□□ -1.06
CLCN6-208ENST00000494028 IGHV7-81A0A0B4J1V7 117 aa8.42□□□□□ -1.06
CLCN6-208ENST00000494028 TRAV40A0A0B4J280 105 aa8.42□□□□□ -1.06
CLCN6-208ENST00000494028 CXorf65A6NEN9 183 aa8.42□□□□□ -1.06
CLCN6-208ENST00000494028 CXCL1P09341 107 aa8.42□□□□□ -1.06
CLCN6-208ENST00000494028 PAX1P15863 534 aa8.42□□□□□ -1.06
CLCN6-208ENST00000494028 CX3CL1P78423 397 aa8.42□□□□□ -1.06
CLCN6-208ENST00000494028 PAX8Q06710 450 aa8.42□□□□□ -1.06
CLCN6-208ENST00000494028 ELOBQ15370 118 aa8.42□□□□□ -1.06
CLCN6-208ENST00000494028 FAM120AOSQ5T036 256 aa8.42□□□□□ -1.06
CLCN6-208ENST00000494028 C10orf113Q5VZT2 155 aa8.42□□□□□ -1.06
CLCN6-208ENST00000494028 PIP4P2Q8N4L2 257 aa8.42□□□□□ -1.06
CLCN6-208ENST00000494028 NRGNQ92686 78 aa8.42□□□□□ -1.06
CLCN6-208ENST00000494028 PERPQ96FX8 193 aa8.42□□□□□ -1.06
CLCN6-208ENST00000494028 UHRF2Q96PU4 802 aa8.42□□□□□ -1.06
CLCN6-208ENST00000494028 WNT10AQ9GZT5 417 aa8.42□□□□□ -1.06
CLCN6-208ENST00000494028 GSX1Q9H4S2 264 aaPredicted RBP8.42□□□□□ -1.06
CLCN6-208ENST00000494028 SPTAN1Q13813 2472 aaKnown RBP8.42□□□□□ -1.06
CLCN6-208ENST00000494028 USP9YO00507 2555 aaPredicted RBP8.42□□□□□ -1.06
CLCN6-208ENST00000494028 TGIF2-C20orf24A0A0A6YYL0 155 aa8.41□□□□□ -1.06
CLCN6-208ENST00000494028 TRAV5A0A0B4J249 113 aa8.41□□□□□ -1.06
CLCN6-208ENST00000494028 CENPVL3A0A0U1RRI6 287 aa8.41□□□□□ -1.06
CLCN6-208ENST00000494028 CLDN34H7C241 214 aa8.41□□□□□ -1.06
CLCN6-208ENST00000494028 NDUFB4O95168 129 aa8.41□□□□□ -1.06
CLCN6-208ENST00000494028 HLA-DRB1P01911 266 aa8.41□□□□□ -1.06
CLCN6-208ENST00000494028 OR10J4P0C629 311 aa8.41□□□□□ -1.06
CLCN6-208ENST00000494028 COX6B1P14854 86 aa8.41□□□□□ -1.06
CLCN6-208ENST00000494028 PLP1P60201 277 aa8.41□□□□□ -1.06
CLCN6-208ENST00000494028 ZNF562Q6V9R5 426 aa8.41□□□□□ -1.06
CLCN6-208ENST00000494028 LINC01551Q86U37 167 aa8.41□□□□□ -1.06
CLCN6-208ENST00000494028 ZFP82Q8N141 532 aa8.41□□□□□ -1.06
CLCN6-208ENST00000494028 OR1L6Q8NGR2 347 aa8.41□□□□□ -1.06
CLCN6-208ENST00000494028 CTDSP1Q9GZU7 261 aa8.41□□□□□ -1.06
CLCN6-208ENST00000494028 DNAJC4Q9NNZ3 241 aa8.41□□□□□ -1.06
CLCN6-208ENST00000494028 TMEM242Q9NWH2 141 aa8.41□□□□□ -1.06
CLCN6-208ENST00000494028 LRBAP50851 2863 aa8.41□□□□□ -1.06
CLCN6-208ENST00000494028 UTP20O75691 2785 aaKnown RBP8.41□□□□□ -1.06
CLCN6-208ENST00000494028 IGHV1-69DA0A0B4J2H0 117 aa8.4□□□□□ -1.06
CLCN6-208ENST00000494028 A1L4Q6 167 aa8.4□□□□□ -1.06
CLCN6-208ENST00000494028 C1orf196B1AJZ1 125 aa8.4□□□□□ -1.06
CLCN6-208ENST00000494028 C9JCJ5 164 aa8.4□□□□□ -1.06
CLCN6-208ENST00000494028 IGKV1-17P01599 117 aa8.4□□□□□ -1.06
CLCN6-208ENST00000494028 IGHV1-69P01742 117 aa8.4□□□□□ -1.06
CLCN6-208ENST00000494028 PYYP10082 97 aa8.4□□□□□ -1.06
CLCN6-208ENST00000494028 EGR2P11161 476 aaPredicted RBP8.4□□□□□ -1.06
CLCN6-208ENST00000494028 RAB5BP61020 215 aa8.4□□□□□ -1.06
CLCN6-208ENST00000494028 TIGITQ495A1 244 aa8.4□□□□□ -1.06
CLCN6-208ENST00000494028 OR1B1Q8NGR6 318 aa8.4□□□□□ -1.06
CLCN6-208ENST00000494028 FXYD5Q96DB9 178 aa8.4□□□□□ -1.06
CLCN6-208ENST00000494028 RBM14Q96PK6 669 aaKnown RBP8.4□□□□□ -1.06
CLCN6-208ENST00000494028 FANCD2OSQ96PS1 177 aa8.4□□□□□ -1.06
CLCN6-208ENST00000494028 HSPB9Q9BQS6 159 aa8.4□□□□□ -1.06
CLCN6-208ENST00000494028 PAXXQ9BUH6 204 aa8.4□□□□□ -1.06
CLCN6-208ENST00000494028 PRELID1Q9Y255 219 aa8.4□□□□□ -1.06
CLCN6-208ENST00000494028 URGCP-MRPS24S4R325 110 aa8.4□□□□□ -1.06
CLCN6-208ENST00000494028 ELOA3CA0A087WX78 387 aaPredicted RBP8.39□□□□□ -1.07
CLCN6-208ENST00000494028 A0A096LNT2 108 aa8.39□□□□□ -1.07
CLCN6-208ENST00000494028 A0A1W2PRE2 83 aa8.39□□□□□ -1.07
CLCN6-208ENST00000494028 PGPEP1LA6NFU8 196 aa8.39□□□□□ -1.07
CLCN6-208ENST00000494028 NCBP2LA6PVI3 153 aaKnown RBP8.39□□□□□ -1.07
CLCN6-208ENST00000494028 H7BYZ3 331 aa8.39□□□□□ -1.07
CLCN6-208ENST00000494028 FAM106CPP0CH98 169 aa8.39□□□□□ -1.07
CLCN6-208ENST00000494028 GP9P14770 177 aa8.39□□□□□ -1.07
CLCN6-208ENST00000494028 BRS3P32247 399 aa8.39□□□□□ -1.07
CLCN6-208ENST00000494028 KLF17Q5JT82 389 aaPredicted RBP8.39□□□□□ -1.07
CLCN6-208ENST00000494028 LINC00305Q7Z4B0 112 aa8.39□□□□□ -1.07
CLCN6-208ENST00000494028 TTC9CQ8N5M4 171 aa8.39□□□□□ -1.07
CLCN6-208ENST00000494028 C2CD4CQ8TF44 421 aa8.39□□□□□ -1.07
CLCN6-208ENST00000494028 ZNF48Q96MX3 618 aaPredicted RBP8.39□□□□□ -1.07
CLCN6-208ENST00000494028 ELOVL1Q9BW60 279 aa8.39□□□□□ -1.07
CLCN6-208ENST00000494028 C1RLQ9NZP8 487 aa8.39□□□□□ -1.07
CLCN6-208ENST00000494028 COL12A1Q99715 3063 aa8.39□□□□□ -1.07
CLCN6-208ENST00000494028 CR1P17927 2039 aa8.38□□□□□ -1.07
CLCN6-208ENST00000494028 IGHV3OR16-10A0A075B7F0 116 aa8.38□□□□□ -1.07
CLCN6-208ENST00000494028 F8W735 103 aaPredicted RBP8.38□□□□□ -1.07
CLCN6-208ENST00000494028 ATP6V0E1O15342 81 aa8.38□□□□□ -1.07
CLCN6-208ENST00000494028 MSMBP08118 114 aa8.38□□□□□ -1.07
CLCN6-208ENST00000494028 PSG1P11464 419 aa8.38□□□□□ -1.07
CLCN6-208ENST00000494028 CD99P14209 185 aa8.38□□□□□ -1.07
CLCN6-208ENST00000494028 LYZP61626 148 aa8.38□□□□□ -1.07
CLCN6-208ENST00000494028 CENPWQ5EE01 88 aa8.38□□□□□ -1.07
CLCN6-208ENST00000494028 C1QL4Q86Z23 238 aa8.38□□□□□ -1.07
CLCN6-208ENST00000494028 C5orf56Q8N8D9 126 aa8.38□□□□□ -1.07
CLCN6-208ENST00000494028 FAM110DQ8TAY7 271 aaPredicted RBP8.38□□□□□ -1.07
CLCN6-208ENST00000494028 ANAPC16Q96DE5 110 aa8.38□□□□□ -1.07
CLCN6-208ENST00000494028 RASL11BQ9BPW5 248 aa8.38□□□□□ -1.07
CLCN6-208ENST00000494028 OR51M1Q9H341 326 aa8.38□□□□□ -1.07
CLCN6-208ENST00000494028 MED13LQ71F56 2210 aa8.37□□□□□ -1.07
CLCN6-208ENST00000494028 PTPN13Q12923 2485 aa8.37□□□□□ -1.07
CLCN6-208ENST00000494028 TRBV24-1A0A075B6N3 115 aa8.37□□□□□ -1.07
CLCN6-208ENST00000494028 MDFIC2A0A1B0GVS7 189 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms