RNA–Protein interactions for RNA: ENST00000490800.1

CLDN1-202, Transcript of claudin 1, humanhuman

TSL 2

Gene CLDN1, Length 432 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1-202ENST00000490800 SNCAP37840 140 aa5.9□□□□□ -1.46
CLDN1-202ENST00000490800 MFAP2P55001 183 aa5.9□□□□□ -1.46
CLDN1-202ENST00000490800 DLK1P80370 383 aa5.9□□□□□ -1.46
CLDN1-202ENST00000490800 ZNF266Q14584 549 aa5.9□□□□□ -1.46
CLDN1-202ENST00000490800 VWC2Q2TAL6 325 aa5.9□□□□□ -1.46
CLDN1-202ENST00000490800 ASPHD1Q5U4P2 390 aa5.9□□□□□ -1.46
CLDN1-202ENST00000490800 PVRIGQ6DKI7 326 aa5.9□□□□□ -1.46
CLDN1-202ENST00000490800 C19orf35Q6ZS72 473 aa5.9□□□□□ -1.46
CLDN1-202ENST00000490800 HSD17B13Q7Z5P4 300 aaPredicted RBP5.9□□□□□ -1.46
CLDN1-202ENST00000490800 HSD17B11Q8NBQ5 300 aa5.9□□□□□ -1.46
CLDN1-202ENST00000490800 ZNF114Q8NC26 417 aa5.9□□□□□ -1.46
CLDN1-202ENST00000490800 SCARB1Q8WTV0 552 aa5.9□□□□□ -1.46
CLDN1-202ENST00000490800 ARPC1AQ92747 370 aa5.9□□□□□ -1.46
CLDN1-202ENST00000490800 PINX1Q96BK5 328 aaKnown RBP5.9□□□□□ -1.46
CLDN1-202ENST00000490800 PHYHIPLQ96FC7 376 aa5.9□□□□□ -1.46
CLDN1-202ENST00000490800 P2RX4Q99571 388 aa5.9□□□□□ -1.46
CLDN1-202ENST00000490800 RASL11BQ9BPW5 248 aa5.9□□□□□ -1.46
CLDN1-202ENST00000490800 KRTAP4-12Q9BQ66 201 aa5.9□□□□□ -1.46
CLDN1-202ENST00000490800 HSPB9Q9BQS6 159 aa5.9□□□□□ -1.46
CLDN1-202ENST00000490800 GGACTQ9BVM4 153 aa5.9□□□□□ -1.46
CLDN1-202ENST00000490800 PARD6GQ9BYG4 376 aaPredicted RBP5.9□□□□□ -1.46
CLDN1-202ENST00000490800 UBQLN2Q9UHD9 624 aa5.9□□□□□ -1.46
CLDN1-202ENST00000490800 UBE2L5PA0A1B0GUS4 154 aa5.89□□□□□ -1.47
CLDN1-202ENST00000490800 RPS10-NUDT3A0A1W2PQS6 291 aa5.89□□□□□ -1.47
CLDN1-202ENST00000490800 TCRBV4S1A1TA0A5B7 111 aa5.89□□□□□ -1.47
CLDN1-202ENST00000490800 FGF16O43320 207 aa5.89□□□□□ -1.47
CLDN1-202ENST00000490800 IFNA5P01569 189 aa5.89□□□□□ -1.47
CLDN1-202ENST00000490800 SPP1P10451 314 aa5.89□□□□□ -1.47
CLDN1-202ENST00000490800 ATP6V0CP27449 155 aa5.89□□□□□ -1.47
CLDN1-202ENST00000490800 SUB1P53999 127 aaKnown RBP eCLIP5.89□□□□□ -1.47
CLDN1-202ENST00000490800 C19orf54Q5BKX5 351 aa5.89□□□□□ -1.47
CLDN1-202ENST00000490800 TCTEX1D4Q5JR98 221 aa5.89□□□□□ -1.47
CLDN1-202ENST00000490800 C9orf152Q5JTZ5 239 aa5.89□□□□□ -1.47
CLDN1-202ENST00000490800 FAM74A1Q5RGS3 127 aa5.89□□□□□ -1.47
CLDN1-202ENST00000490800 C10orf99Q6UWK7 81 aa5.89□□□□□ -1.47
CLDN1-202ENST00000490800 C16orf82Q7Z2V1 217 aa5.89□□□□□ -1.47
CLDN1-202ENST00000490800 SYT8Q8NBV8 401 aa5.89□□□□□ -1.47
CLDN1-202ENST00000490800 WFDC9Q8NEX5 89 aa5.89□□□□□ -1.47
CLDN1-202ENST00000490800 ABHD5Q8WTS1 349 aa5.89□□□□□ -1.47
CLDN1-202ENST00000490800 TMED6Q8WW62 240 aa5.89□□□□□ -1.47
CLDN1-202ENST00000490800 FAM103A1Q9BTL3 118 aaKnown RBP5.89□□□□□ -1.47
CLDN1-202ENST00000490800 WDR61Q9GZS3 305 aaKnown RBP5.89□□□□□ -1.47
CLDN1-202ENST00000490800 SH3BGRL3Q9H299 93 aa5.89□□□□□ -1.47
CLDN1-202ENST00000490800 UQCC1Q9NVA1 299 aa5.89□□□□□ -1.47
CLDN1-202ENST00000490800 FBXO7Q9Y3I1 522 aa5.89□□□□□ -1.47
CLDN1-202ENST00000490800 DMRT1Q9Y5R6 373 aa5.89□□□□□ -1.47
CLDN1-202ENST00000490800 F11RQ9Y624 299 aaKnown RBP5.89□□□□□ -1.47
CLDN1-202ENST00000490800 RFNGQ9Y644 331 aa5.89□□□□□ -1.47
CLDN1-202ENST00000490800 LINC01548A6NM66 108 aa5.88□□□□□ -1.47
CLDN1-202ENST00000490800 FNDC10F2Z333 226 aa5.88□□□□□ -1.47
CLDN1-202ENST00000490800 CRYGCP07315 174 aa5.88□□□□□ -1.47
CLDN1-202ENST00000490800 SEC11BP0C7V7 166 aa5.88□□□□□ -1.47
CLDN1-202ENST00000490800 GYPEP15421 78 aa5.88□□□□□ -1.47
CLDN1-202ENST00000490800 IGLL1P15814 213 aa5.88□□□□□ -1.47
CLDN1-202ENST00000490800 CTRB1P17538 263 aa5.88□□□□□ -1.47
CLDN1-202ENST00000490800 FGF7P21781 194 aa5.88□□□□□ -1.47
CLDN1-202ENST00000490800 GPX4P36969 197 aaPredicted RBP5.88□□□□□ -1.47
CLDN1-202ENST00000490800 RUNX1Q01196 453 aa5.88□□□□□ -1.47
CLDN1-202ENST00000490800 CTRB2Q6GPI1 263 aa5.88□□□□□ -1.47
CLDN1-202ENST00000490800 EIF5AL1Q6IS14 154 aaKnown RBP5.88□□□□□ -1.47
CLDN1-202ENST00000490800 SLC25A24Q6NUK1 477 aa5.88□□□□□ -1.47
CLDN1-202ENST00000490800 TTC9CQ8N5M4 171 aa5.88□□□□□ -1.47
CLDN1-202ENST00000490800 OR1P1Q8NH06 330 aa5.88□□□□□ -1.47
CLDN1-202ENST00000490800 MRAPQ8TCY5 172 aa5.88□□□□□ -1.47
CLDN1-202ENST00000490800 SCGB1C1Q8TD33 95 aa5.88□□□□□ -1.47
CLDN1-202ENST00000490800 RNASEH2CQ8TDP1 164 aaKnown RBP5.88□□□□□ -1.47
CLDN1-202ENST00000490800 PCNPQ8WW12 178 aaKnown RBP5.88□□□□□ -1.47
CLDN1-202ENST00000490800 RSG1Q9BU20 258 aa5.88□□□□□ -1.47
CLDN1-202ENST00000490800 SLC25A32Q9H2D1 315 aa5.88□□□□□ -1.47
CLDN1-202ENST00000490800 FNDC4Q9H6D8 234 aaPredicted RBP5.88□□□□□ -1.47
CLDN1-202ENST00000490800 PARP11Q9NR21 331 aa5.88□□□□□ -1.47
CLDN1-202ENST00000490800 WDR83OSQ9Y284 106 aa5.88□□□□□ -1.47
CLDN1-202ENST00000490800 NOTCH3Q9UM47 2321 aa5.87□□□□□ -1.47
CLDN1-202ENST00000490800 SMCO3A2RU48 225 aa5.87□□□□□ -1.47
CLDN1-202ENST00000490800 NPIPB5A8MRT5 1133 aa5.87□□□□□ -1.47
CLDN1-202ENST00000490800 M0QZK8 103 aa5.87□□□□□ -1.47
CLDN1-202ENST00000490800 ATP6V0E1O15342 81 aa5.87□□□□□ -1.47
CLDN1-202ENST00000490800 NMBP08949 121 aa5.87□□□□□ -1.47
CLDN1-202ENST00000490800 SULT1A2P50226 295 aa5.87□□□□□ -1.47
CLDN1-202ENST00000490800 GAMTQ14353 236 aa5.87□□□□□ -1.47
CLDN1-202ENST00000490800 CLLU1Q5K131 121 aa5.87□□□□□ -1.47
CLDN1-202ENST00000490800 BTNL8Q6UX41 500 aa5.87□□□□□ -1.47
CLDN1-202ENST00000490800 SLC16A13Q7RTY0 426 aa5.87□□□□□ -1.47
CLDN1-202ENST00000490800 ZNF329Q86UD4 541 aa5.87□□□□□ -1.47
CLDN1-202ENST00000490800 LFNGQ8NES3 379 aa5.87□□□□□ -1.47
CLDN1-202ENST00000490800 OR2G3Q8NGZ4 309 aa5.87□□□□□ -1.47
CLDN1-202ENST00000490800 CACNG8Q8WXS5 425 aa5.87□□□□□ -1.47
CLDN1-202ENST00000490800 GNPNAT1Q96EK6 184 aaPredicted RBP5.87□□□□□ -1.47
CLDN1-202ENST00000490800 PSMG3Q9BT73 122 aaPredicted RBP5.87□□□□□ -1.47
CLDN1-202ENST00000490800 AURKAIP1Q9NWT8 199 aaPredicted RBP5.87□□□□□ -1.47
CLDN1-202ENST00000490800 LSM4Q9Y4Z0 139 aaKnown RBP5.87□□□□□ -1.47
CLDN1-202ENST00000490800 TIMM9Q9Y5J7 89 aa5.87□□□□□ -1.47
CLDN1-202ENST00000490800 TSSC4Q9Y5U2 329 aaPredicted RBP5.87□□□□□ -1.47
CLDN1-202ENST00000490800 IGLV11-55A0A075B6I3 123 aa5.86□□□□□ -1.47
CLDN1-202ENST00000490800 IGHG2P01859 326 aa5.86□□□□□ -1.47
CLDN1-202ENST00000490800 PRH1P02810 166 aa5.86□□□□□ -1.47
CLDN1-202ENST00000490800 OPRK1P41145 380 aa5.86□□□□□ -1.47
CLDN1-202ENST00000490800 CRIP2P52943 208 aaPredicted RBP5.86□□□□□ -1.47
CLDN1-202ENST00000490800 AKR1C1Q04828 323 aa5.86□□□□□ -1.47
CLDN1-202ENST00000490800 ECSCRQ19T08 205 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms