RNA–Protein interactions for RNA: ENST00000490733.1

EPCAM-206, Transcript of epithelial cell adhesion molecule, humanhuman

TSL 3

Gene EPCAM, Length 752 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPCAM-206ENST00000490733 SNCAP37840 140 aa3.78□□□□□ -1.8
EPCAM-206ENST00000490733 HILS1P60008 231 aa3.78□□□□□ -1.8
EPCAM-206ENST00000490733 UBA52P62987 128 aaKnown RBP3.78□□□□□ -1.8
EPCAM-206ENST00000490733 ERHP84090 104 aaKnown RBP3.78□□□□□ -1.8
EPCAM-206ENST00000490733 BAXQ07812 192 aa3.78□□□□□ -1.8
EPCAM-206ENST00000490733 SLC38A11Q08AI6 406 aa3.78□□□□□ -1.8
EPCAM-206ENST00000490733 CLINT1Q14677 625 aa3.78□□□□□ -1.8
EPCAM-206ENST00000490733 ECSCRQ19T08 205 aa3.78□□□□□ -1.8
EPCAM-206ENST00000490733 VWC2Q2TAL6 325 aa3.78□□□□□ -1.8
EPCAM-206ENST00000490733 AKIRIN2Q53H80 203 aa3.78□□□□□ -1.8
EPCAM-206ENST00000490733 C9orf152Q5JTZ5 239 aa3.78□□□□□ -1.8
EPCAM-206ENST00000490733 OR8G2PQ6IF36 304 aa3.78□□□□□ -1.8
EPCAM-206ENST00000490733 UNQ5815/PRO19632Q6UWF5 114 aa3.78□□□□□ -1.8
EPCAM-206ENST00000490733 C10orf99Q6UWK7 81 aa3.78□□□□□ -1.8
EPCAM-206ENST00000490733 Q6ZSV7 163 aa3.78□□□□□ -1.8
EPCAM-206ENST00000490733 HSD17B13Q7Z5P4 300 aaPredicted RBP3.78□□□□□ -1.8
EPCAM-206ENST00000490733 SLC35E3Q7Z769 313 aa3.78□□□□□ -1.8
EPCAM-206ENST00000490733 OR5T1Q8NG75 326 aa3.78□□□□□ -1.8
EPCAM-206ENST00000490733 OR1P1Q8NH06 330 aa3.78□□□□□ -1.8
EPCAM-206ENST00000490733 FAM110DQ8TAY7 271 aaPredicted RBP3.78□□□□□ -1.8
EPCAM-206ENST00000490733 ABHD5Q8WTS1 349 aa3.78□□□□□ -1.8
EPCAM-206ENST00000490733 ZNF414Q96IQ9 312 aa3.78□□□□□ -1.8
EPCAM-206ENST00000490733 SLC25A31Q9H0C2 315 aa3.78□□□□□ -1.8
EPCAM-206ENST00000490733 ARV1Q9H2C2 271 aa3.78□□□□□ -1.8
EPCAM-206ENST00000490733 SEPSECSQ9HD40 501 aaKnown RBP3.78□□□□□ -1.8
EPCAM-206ENST00000490733 ENY2Q9NPA8 101 aa3.78□□□□□ -1.8
EPCAM-206ENST00000490733 SERTAD4Q9NUC0 356 aa3.78□□□□□ -1.8
EPCAM-206ENST00000490733 ZNF580Q9UK33 172 aa3.78□□□□□ -1.8
EPCAM-206ENST00000490733 PAIP2BQ9ULR5 123 aaKnown RBP3.78□□□□□ -1.8
EPCAM-206ENST00000490733 IGKV1D-37A0A075B6S9 117 aa3.77□□□□□ -1.81
EPCAM-206ENST00000490733 TRBV9A0A0B4J1U6 114 aa3.77□□□□□ -1.81
EPCAM-206ENST00000490733 IGHV3-21A0A0B4J1V1 117 aa3.77□□□□□ -1.81
EPCAM-206ENST00000490733 TRIM77I1YAP6 450 aa3.77□□□□□ -1.81
EPCAM-206ENST00000490733 OR2J3O76001 311 aa3.77□□□□□ -1.81
EPCAM-206ENST00000490733 NDUFB8O95169 186 aa3.77□□□□□ -1.81
EPCAM-206ENST00000490733 MT-CO2P00403 227 aa3.77□□□□□ -1.81
EPCAM-206ENST00000490733 IFNA4P05014 189 aa3.77□□□□□ -1.81
EPCAM-206ENST00000490733 MALP21145 153 aa3.77□□□□□ -1.81
EPCAM-206ENST00000490733 NUP62P37198 522 aaPredicted RBP3.77□□□□□ -1.81
EPCAM-206ENST00000490733 ATP5IP56385 69 aaPredicted RBP3.77□□□□□ -1.81
EPCAM-206ENST00000490733 RAB11AP62491 216 aa3.77□□□□□ -1.81
EPCAM-206ENST00000490733 DLK1P80370 383 aa3.77□□□□□ -1.81
EPCAM-206ENST00000490733 RUNX1Q01196 453 aa3.77□□□□□ -1.81
EPCAM-206ENST00000490733 KIAA0141Q14154 515 aaPredicted RBP3.77□□□□□ -1.81
EPCAM-206ENST00000490733 GAMTQ14353 236 aa3.77□□□□□ -1.81
EPCAM-206ENST00000490733 ZNF674Q2M3X9 581 aa3.77□□□□□ -1.81
EPCAM-206ENST00000490733 WDR73Q6P4I2 378 aa3.77□□□□□ -1.81
EPCAM-206ENST00000490733 RBMS3Q6XE24 437 aaKnown RBP3.77□□□□□ -1.81
EPCAM-206ENST00000490733 STX12Q86Y82 276 aa3.77□□□□□ -1.81
EPCAM-206ENST00000490733 OR10P1Q8NGE3 313 aa3.77□□□□□ -1.81
EPCAM-206ENST00000490733 OR1S2Q8NGQ3 325 aa3.77□□□□□ -1.81
EPCAM-206ENST00000490733 OR2T6Q8NHC8 308 aa3.77□□□□□ -1.81
EPCAM-206ENST00000490733 STOML3Q8TAV4 291 aa3.77□□□□□ -1.81
EPCAM-206ENST00000490733 RNASEH2CQ8TDP1 164 aaKnown RBP3.77□□□□□ -1.81
EPCAM-206ENST00000490733 WIPF2Q8TF74 440 aaPredicted RBP3.77□□□□□ -1.81
EPCAM-206ENST00000490733 ATP6V0BQ99437 205 aa3.77□□□□□ -1.81
EPCAM-206ENST00000490733 ATP5SQ99766 215 aa3.77□□□□□ -1.81
EPCAM-206ENST00000490733 PRSS22Q9GZN4 317 aa3.77□□□□□ -1.81
EPCAM-206ENST00000490733 NPFFR1Q9GZQ6 430 aa3.77□□□□□ -1.81
EPCAM-206ENST00000490733 SH3BGRL3Q9H299 93 aa3.77□□□□□ -1.81
EPCAM-206ENST00000490733 KLK15Q9H2R5 256 aa3.77□□□□□ -1.81
EPCAM-206ENST00000490733 ZC4H2Q9NQZ6 224 aa3.77□□□□□ -1.81
EPCAM-206ENST00000490733 LSM4Q9Y4Z0 139 aaKnown RBP3.77□□□□□ -1.81
EPCAM-206ENST00000490733 FBN1P35555 2871 aaKnown RBP3.77□□□□□ -1.81
EPCAM-206ENST00000490733 ATRQ13535 2644 aa3.77□□□□□ -1.81
EPCAM-206ENST00000490733 ANK2Q01484 3957 aa3.77□□□□□ -1.81
EPCAM-206ENST00000490733 UBE2L5PA0A1B0GUS4 154 aa3.76□□□□□ -1.81
EPCAM-206ENST00000490733 KANTRA0A1W2PQU2 76 aa3.76□□□□□ -1.81
EPCAM-206ENST00000490733 MFSD2BA6NFX1 497 aa3.76□□□□□ -1.81
EPCAM-206ENST00000490733 FNDC10F2Z333 226 aa3.76□□□□□ -1.81
EPCAM-206ENST00000490733 AP4M1O00189 453 aa3.76□□□□□ -1.81
EPCAM-206ENST00000490733 TAAR5O14804 337 aa3.76□□□□□ -1.81
EPCAM-206ENST00000490733 JTBO76095 146 aa3.76□□□□□ -1.81
EPCAM-206ENST00000490733 BRI3O95415 125 aa3.76□□□□□ -1.81
EPCAM-206ENST00000490733 IGHV3-23P01764 117 aa3.76□□□□□ -1.81
EPCAM-206ENST00000490733 IGHG4P01861 327 aa3.76□□□□□ -1.81
EPCAM-206ENST00000490733 DEFA4P12838 97 aa3.76□□□□□ -1.81
EPCAM-206ENST00000490733 ATP6V0CP27449 155 aa3.76□□□□□ -1.81
EPCAM-206ENST00000490733 PSMB8P28062 276 aa3.76□□□□□ -1.81
EPCAM-206ENST00000490733 ARL3P36405 182 aa3.76□□□□□ -1.81
EPCAM-206ENST00000490733 GPX4P36969 197 aaPredicted RBP3.76□□□□□ -1.81
EPCAM-206ENST00000490733 OPRK1P41145 380 aa3.76□□□□□ -1.81
EPCAM-206ENST00000490733 SUB1P53999 127 aaKnown RBP eCLIP3.76□□□□□ -1.817e-11■■■□□ 19.2
EPCAM-206ENST00000490733 HBG1P69891 147 aa3.76□□□□□ -1.81
EPCAM-206ENST00000490733 HBG2P69892 147 aa3.76□□□□□ -1.81
EPCAM-206ENST00000490733 RPP30P78346 268 aaKnown RBP3.76□□□□□ -1.81
EPCAM-206ENST00000490733 SCGB2A2Q13296 93 aa3.76□□□□□ -1.81
EPCAM-206ENST00000490733 ATP6V1FQ16864 119 aa3.76□□□□□ -1.81
EPCAM-206ENST00000490733 KHDC1LQ5JSQ8 128 aa3.76□□□□□ -1.81
EPCAM-206ENST00000490733 HIST2H2BDQ6DRA6 164 aa3.76□□□□□ -1.81
EPCAM-206ENST00000490733 SLC25A24Q6NUK1 477 aa3.76□□□□□ -1.81
EPCAM-206ENST00000490733 TEX261Q6UWH6 196 aa3.76□□□□□ -1.81
EPCAM-206ENST00000490733 TMEM182Q6ZP80 229 aaPredicted RBP3.76□□□□□ -1.81
EPCAM-206ENST00000490733 SLC16A13Q7RTY0 426 aa3.76□□□□□ -1.81
EPCAM-206ENST00000490733 ZNF329Q86UD4 541 aa3.76□□□□□ -1.81
EPCAM-206ENST00000490733 SLC51BQ86UW2 128 aa3.76□□□□□ -1.81
EPCAM-206ENST00000490733 UBAC2Q8NBM4 344 aa3.76□□□□□ -1.81
EPCAM-206ENST00000490733 TMEM116Q8NCL8 245 aa3.76□□□□□ -1.81
EPCAM-206ENST00000490733 ZNF418Q8TF45 676 aaPredicted RBP3.76□□□□□ -1.81
EPCAM-206ENST00000490733 SCARB1Q8WTV0 552 aa3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms