RNA–Protein interactions for RNA: ENST00000490638.5

ARHGEF39-205, Transcript of Rho guanine nucleotide exchange factor 39, humanhuman

TSL 1 (best)

Gene ARHGEF39, Length 4,498 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39-205ENST00000490638 PKD1L2Q7Z442 2459 aa11.74□□□□□ -0.53
ARHGEF39-205ENST00000490638 IGKV1-16P04430 117 aa11.74□□□□□ -0.53
ARHGEF39-205ENST00000490638 PCNX3Q9H6A9 2034 aa11.74□□□□□ -0.53
ARHGEF39-205ENST00000490638 PHLDA3Q9Y5J5 127 aa11.74□□□□□ -0.53
ARHGEF39-205ENST00000490638 CD81P60033 236 aa11.74□□□□□ -0.53
ARHGEF39-205ENST00000490638 DEFA6Q01524 100 aa11.74□□□□□ -0.53
ARHGEF39-205ENST00000490638 TMEM18Q96B42 140 aa11.74□□□□□ -0.53
ARHGEF39-205ENST00000490638 TMEM131Q92545 1883 aa11.74□□□□□ -0.53
ARHGEF39-205ENST00000490638 TEX36Q5VZQ5 186 aa11.73□□□□□ -0.53
ARHGEF39-205ENST00000490638 FAM159AQ6UWV7 190 aa11.73□□□□□ -0.53
ARHGEF39-205ENST00000490638 NHLRC2Q8NBF2 726 aa11.73□□□□□ -0.53
ARHGEF39-205ENST00000490638 TRAV3A0A0B4J244 114 aa11.73□□□□□ -0.53
ARHGEF39-205ENST00000490638 HERPUD1Q15011 391 aa11.73□□□□□ -0.53
ARHGEF39-205ENST00000490638 PVRIGQ6DKI7 326 aa11.73□□□□□ -0.53
ARHGEF39-205ENST00000490638 DENND4AQ7Z401 1863 aa11.73□□□□□ -0.53
ARHGEF39-205ENST00000490638 FAM74A7A6NL05 159 aa11.73□□□□□ -0.53
ARHGEF39-205ENST00000490638 B4DEV8 164 aa11.73□□□□□ -0.53
ARHGEF39-205ENST00000490638 FCER1GP30273 86 aa11.73□□□□□ -0.53
ARHGEF39-205ENST00000490638 COX19Q49B96 90 aa11.73□□□□□ -0.53
ARHGEF39-205ENST00000490638 IBA57Q5T440 356 aaKnown RBP11.73□□□□□ -0.53
ARHGEF39-205ENST00000490638 BEND2Q8NDZ0 799 aa11.73□□□□□ -0.53
ARHGEF39-205ENST00000490638 C1orf147Q96MC9 270 aaPredicted RBP11.73□□□□□ -0.53
ARHGEF39-205ENST00000490638 SEC11CQ9BY50 192 aa11.73□□□□□ -0.53
ARHGEF39-205ENST00000490638 TSTD3H0UI37 97 aa11.72□□□□□ -0.53
ARHGEF39-205ENST00000490638 ZNF253O75346 499 aa11.72□□□□□ -0.53
ARHGEF39-205ENST00000490638 DANCRP0C864 163 aa11.72□□□□□ -0.53
ARHGEF39-205ENST00000490638 CCKARP32238 428 aa11.72□□□□□ -0.53
ARHGEF39-205ENST00000490638 PIP4P2Q8N4L2 257 aa11.72□□□□□ -0.53
ARHGEF39-205ENST00000490638 LRTM2Q8N967 370 aa11.72□□□□□ -0.53
ARHGEF39-205ENST00000490638 TMPRSS5Q9H3S3 457 aa11.72□□□□□ -0.53
ARHGEF39-205ENST00000490638 FAM90A9PA6NNJ1 464 aa11.72□□□□□ -0.53
ARHGEF39-205ENST00000490638 C10orf142B7Z368 130 aa11.72□□□□□ -0.53
ARHGEF39-205ENST00000490638 VENTXO95231 258 aa11.72□□□□□ -0.53
ARHGEF39-205ENST00000490638 ZNF585BQ52M93 769 aa11.72□□□□□ -0.53
ARHGEF39-205ENST00000490638 LDLRAD2Q5SZI1 272 aa11.72□□□□□ -0.53
ARHGEF39-205ENST00000490638 Q6ZS49 121 aa11.72□□□□□ -0.53
ARHGEF39-205ENST00000490638 ZMAT5Q9UDW3 170 aaKnown RBP11.72□□□□□ -0.53
ARHGEF39-205ENST00000490638 C2CD3Q4AC94 2353 aa11.72□□□□□ -0.53
ARHGEF39-205ENST00000490638 IGKV1-5P01602 117 aa11.72□□□□□ -0.53
ARHGEF39-205ENST00000490638 KRTDAPP60985 99 aa11.72□□□□□ -0.53
ARHGEF39-205ENST00000490638 SUPT4H1P63272 117 aaKnown RBP11.72□□□□□ -0.53
ARHGEF39-205ENST00000490638 SAPCD1Q5SSQ6 148 aa11.72□□□□□ -0.53
ARHGEF39-205ENST00000490638 IL17RELQ6ZVW7 336 aa11.72□□□□□ -0.53
ARHGEF39-205ENST00000490638 IGHV4-61A0A0C4DH41 118 aa11.71□□□□□ -0.53
ARHGEF39-205ENST00000490638 FAM181BA6NEQ2 426 aa11.71□□□□□ -0.53
ARHGEF39-205ENST00000490638 GGCTO75223 188 aaKnown RBP11.71□□□□□ -0.53
ARHGEF39-205ENST00000490638 FBXL19-AS1Q494R0 122 aa11.71□□□□□ -0.53
ARHGEF39-205ENST00000490638 KLHL30-AS1Q8NEE0 82 aa11.71□□□□□ -0.53
ARHGEF39-205ENST00000490638 A0A0B4J293 547 aa11.71□□□□□ -0.53
ARHGEF39-205ENST00000490638 J3QLI3 93 aa11.71□□□□□ -0.53
ARHGEF39-205ENST00000490638 HLA-DRB1P01911 266 aa11.71□□□□□ -0.53
ARHGEF39-205ENST00000490638 IER3P46695 156 aa11.71□□□□□ -0.53
ARHGEF39-205ENST00000490638 LEMD1Q68G75 181 aa11.71□□□□□ -0.53
ARHGEF39-205ENST00000490638 SYT8Q8NBV8 401 aa11.71□□□□□ -0.53
ARHGEF39-205ENST00000490638 KAAG1Q9UBP8 84 aa11.71□□□□□ -0.53
ARHGEF39-205ENST00000490638 IGKV1-6A0A0C4DH72 117 aa11.71□□□□□ -0.54
ARHGEF39-205ENST00000490638 C22orf46C9J442 243 aa11.71□□□□□ -0.54
ARHGEF39-205ENST00000490638 MEOX2P50222 304 aa11.71□□□□□ -0.54
ARHGEF39-205ENST00000490638 LCNL1Q6ZST4 164 aa11.71□□□□□ -0.54
ARHGEF39-205ENST00000490638 ISLRO14498 428 aa11.7□□□□□ -0.54
ARHGEF39-205ENST00000490638 DAZAP2Q15038 168 aaPredicted RBP11.7□□□□□ -0.54
ARHGEF39-205ENST00000490638 IGHV4-30-2A0A087WSY4 118 aa11.7□□□□□ -0.54
ARHGEF39-205ENST00000490638 ZNF98A6NK75 572 aa11.7□□□□□ -0.54
ARHGEF39-205ENST00000490638 SNURFLB1AK76 121 aa11.7□□□□□ -0.54
ARHGEF39-205ENST00000490638 SAP30O75446 220 aa11.7□□□□□ -0.54
ARHGEF39-205ENST00000490638 TWIST1Q15672 202 aa11.7□□□□□ -0.54
ARHGEF39-205ENST00000490638 MIR17HGQ75NE6 70 aa11.7□□□□□ -0.54
ARHGEF39-205ENST00000490638 STPG2Q8N412 459 aa11.7□□□□□ -0.54
ARHGEF39-205ENST00000490638 KIR3DL3Q8N743 410 aa11.7□□□□□ -0.54
ARHGEF39-205ENST00000490638 H0YIZ8 118 aa11.7□□□□□ -0.54
ARHGEF39-205ENST00000490638 ANOS1P23352 680 aa11.7□□□□□ -0.54
ARHGEF39-205ENST00000490638 LY6G6FQ5SQ64 297 aa11.7□□□□□ -0.54
ARHGEF39-205ENST00000490638 SPOCK3Q9BQ16 436 aa11.7□□□□□ -0.54
ARHGEF39-205ENST00000490638 SELENOKQ9Y6D0 94 aa11.7□□□□□ -0.54
ARHGEF39-205ENST00000490638 DYSFO75923 2080 aa11.7□□□□□ -0.54
ARHGEF39-205ENST00000490638 ITGB1BP1O14713 200 aa11.7□□□□□ -0.54
ARHGEF39-205ENST00000490638 IGHV4-39P01824 125 aa11.7□□□□□ -0.54
ARHGEF39-205ENST00000490638 CRISP2P16562 243 aa11.7□□□□□ -0.54
ARHGEF39-205ENST00000490638 C12orf54Q6X4T0 127 aa11.7□□□□□ -0.54
ARHGEF39-205ENST00000490638 RNF126Q9BV68 326 aa11.7□□□□□ -0.54
ARHGEF39-205ENST00000490638 SZT2Q5T011 3432 aa11.69□□□□□ -0.54
ARHGEF39-205ENST00000490638 TRAV34A0A0B4J273 112 aa11.69□□□□□ -0.54
ARHGEF39-205ENST00000490638 MMP23AO75900 390 aa11.69□□□□□ -0.54
ARHGEF39-205ENST00000490638 PRSS1P07477 247 aa11.69□□□□□ -0.54
ARHGEF39-205ENST00000490638 FAM53AQ6NSI3 398 aaPredicted RBP11.69□□□□□ -0.54
ARHGEF39-205ENST00000490638 FAM71F2Q6NXP2 309 aa11.69□□□□□ -0.54
ARHGEF39-205ENST00000490638 ZNF562Q6V9R5 426 aa11.69□□□□□ -0.54
ARHGEF39-205ENST00000490638 WDR83OSQ9Y284 106 aa11.69□□□□□ -0.54
ARHGEF39-205ENST00000490638 RNF114Q9Y508 228 aa11.69□□□□□ -0.54
ARHGEF39-205ENST00000490638 ARL2-SNX15V9GYD0 113 aa11.69□□□□□ -0.54
ARHGEF39-205ENST00000490638 RNF222A6NCQ9 220 aa11.68□□□□□ -0.54
ARHGEF39-205ENST00000490638 OR4C46A6NHA9 309 aa11.68□□□□□ -0.54
ARHGEF39-205ENST00000490638 C9JCJ5 164 aa11.68□□□□□ -0.54
ARHGEF39-205ENST00000490638 IGHV2-5P01817 119 aa11.68□□□□□ -0.54
ARHGEF39-205ENST00000490638 AMTP48728 403 aa11.68□□□□□ -0.54
ARHGEF39-205ENST00000490638 HIST1H2BAQ96A08 127 aa11.68□□□□□ -0.54
ARHGEF39-205ENST00000490638 NCOR1P1Q9H4R4 102 aa11.68□□□□□ -0.54
ARHGEF39-205ENST00000490638 AREGP15514 252 aa11.68□□□□□ -0.54
ARHGEF39-205ENST00000490638 TMEM249Q2WGJ8 235 aa11.68□□□□□ -0.54
ARHGEF39-205ENST00000490638 SAMD13Q5VXD3 122 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms