RNA–Protein interactions for RNA: ENST00000490391.1

PDLIM1-203, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 458 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-203ENST00000490391 DMBX1Q8NFW5 382 aa4.74□□□□□ -1.65
PDLIM1-203ENST00000490391 OR4B1Q8NGF8 309 aa4.74□□□□□ -1.65
PDLIM1-203ENST00000490391 OR13F1Q8NGS4 319 aa4.74□□□□□ -1.65
PDLIM1-203ENST00000490391 PINX1Q96BK5 328 aaKnown RBP4.74□□□□□ -1.65
PDLIM1-203ENST00000490391 RAB3CQ96E17 227 aa4.74□□□□□ -1.65
PDLIM1-203ENST00000490391 DAZAP1Q96EP5 407 aaKnown RBP4.74□□□□□ -1.65
PDLIM1-203ENST00000490391 TMEM208Q9BTX3 173 aa4.74□□□□□ -1.65
PDLIM1-203ENST00000490391 CENPOQ9BU64 300 aa4.74□□□□□ -1.65
PDLIM1-203ENST00000490391 PLEKHA2Q9HB19 425 aa4.74□□□□□ -1.65
PDLIM1-203ENST00000490391 SCPEP1Q9HB40 452 aa4.74□□□□□ -1.65
PDLIM1-203ENST00000490391 DIMT1Q9UNQ2 313 aaKnown RBP4.74□□□□□ -1.65
PDLIM1-203ENST00000490391 NSG2Q9Y328 171 aa4.74□□□□□ -1.65
PDLIM1-203ENST00000490391 OR51B2Q9Y5P1 312 aa4.74□□□□□ -1.65
PDLIM1-203ENST00000490391 F6UB75 175 aa4.73□□□□□ -1.65
PDLIM1-203ENST00000490391 SLC17A2O00624 439 aa4.73□□□□□ -1.65
PDLIM1-203ENST00000490391 WBP4O75554 376 aaKnown RBP4.73□□□□□ -1.65
PDLIM1-203ENST00000490391 IGKV1-17P01599 117 aa4.73□□□□□ -1.65
PDLIM1-203ENST00000490391 CALB2P22676 271 aa4.73□□□□□ -1.65
PDLIM1-203ENST00000490391 RORCP51449 518 aa4.73□□□□□ -1.65
PDLIM1-203ENST00000490391 CLDN12P56749 244 aa4.73□□□□□ -1.65
PDLIM1-203ENST00000490391 MSMO1Q15800 293 aa4.73□□□□□ -1.65
PDLIM1-203ENST00000490391 ZIK1Q3SY52 487 aaPredicted RBP4.73□□□□□ -1.65
PDLIM1-203ENST00000490391 FAM78BQ5VT40 261 aa4.73□□□□□ -1.65
PDLIM1-203ENST00000490391 PQLC1Q8N2U9 271 aa4.73□□□□□ -1.65
PDLIM1-203ENST00000490391 Q8N814 137 aa4.73□□□□□ -1.65
PDLIM1-203ENST00000490391 TMEM56Q96MV1 263 aa4.73□□□□□ -1.65
PDLIM1-203ENST00000490391 WDR12Q9GZL7 423 aaKnown RBP4.73□□□□□ -1.65
PDLIM1-203ENST00000490391 CCL28Q9NRJ3 127 aa4.73□□□□□ -1.65
PDLIM1-203ENST00000490391 MSRB1Q9NZV6 116 aa4.73□□□□□ -1.65
PDLIM1-203ENST00000490391 COMMD9Q9P000 198 aa4.73□□□□□ -1.65
PDLIM1-203ENST00000490391 ELF5Q9UKW6 265 aaPredicted RBP4.73□□□□□ -1.65
PDLIM1-203ENST00000490391 ARL2BPQ9Y2Y0 163 aa4.73□□□□□ -1.65
PDLIM1-203ENST00000490391 A0A0J9YX75 114 aa4.72□□□□□ -1.65
PDLIM1-203ENST00000490391 SOCS3O14543 225 aa4.72□□□□□ -1.65
PDLIM1-203ENST00000490391 BUB3O43684 328 aa4.72□□□□□ -1.65
PDLIM1-203ENST00000490391 HNRNPCP07910 306 aaKnown RBP eCLIP4.72□□□□□ -1.65
PDLIM1-203ENST00000490391 CTXN2P0C2S0 81 aa4.72□□□□□ -1.65
PDLIM1-203ENST00000490391 HIST1H1DP16402 221 aaKnown RBP4.72□□□□□ -1.65
PDLIM1-203ENST00000490391 DTYMKP23919 212 aa4.72□□□□□ -1.65
PDLIM1-203ENST00000490391 SPATA31B1PQ5VZV4 182 aa4.72□□□□□ -1.65
PDLIM1-203ENST00000490391 SIGLEC15Q6ZMC9 328 aa4.72□□□□□ -1.65
PDLIM1-203ENST00000490391 CENPNQ96H22 339 aaPredicted RBP4.72□□□□□ -1.65
PDLIM1-203ENST00000490391 NARS2Q96I59 477 aaKnown RBP4.72□□□□□ -1.65
PDLIM1-203ENST00000490391 VSIG2Q96IQ7 327 aa4.72□□□□□ -1.65
PDLIM1-203ENST00000490391 ABHD1Q96SE0 405 aa4.72□□□□□ -1.65
PDLIM1-203ENST00000490391 A0A075B6Q4 140 aa4.71□□□□□ -1.66
PDLIM1-203ENST00000490391 TMEM272A0A1B0GTI8 110 aa4.71□□□□□ -1.66
PDLIM1-203ENST00000490391 EI24O14681 340 aa4.71□□□□□ -1.66
PDLIM1-203ENST00000490391 CLN5O75503 358 aa4.71□□□□□ -1.66
PDLIM1-203ENST00000490391 ELK1P19419 428 aa4.71□□□□□ -1.66
PDLIM1-203ENST00000490391 ODF1Q14990 250 aa4.71□□□□□ -1.66
PDLIM1-203ENST00000490391 C2orf76Q3KRA6 126 aa4.71□□□□□ -1.66
PDLIM1-203ENST00000490391 CNIH2Q6PI25 160 aa4.71□□□□□ -1.66
PDLIM1-203ENST00000490391 TMED4Q7Z7H5 227 aa4.71□□□□□ -1.66
PDLIM1-203ENST00000490391 OR10R2Q8NGX6 335 aa4.71□□□□□ -1.66
PDLIM1-203ENST00000490391 SECTM1Q8WVN6 248 aa4.71□□□□□ -1.66
PDLIM1-203ENST00000490391 FAM3DQ96BQ1 224 aa4.71□□□□□ -1.66
PDLIM1-203ENST00000490391 LINC00052Q96N35 136 aa4.71□□□□□ -1.66
PDLIM1-203ENST00000490391 PLGRKTQ9HBL7 147 aa4.71□□□□□ -1.66
PDLIM1-203ENST00000490391 ARGLU1Q9NWB6 273 aaPredicted RBP4.71□□□□□ -1.66
PDLIM1-203ENST00000490391 hCG_2014768A0A024R1R8 64 aa4.7□□□□□ -1.66
PDLIM1-203ENST00000490391 INSP01308 110 aa4.7□□□□□ -1.66
PDLIM1-203ENST00000490391 UCHL1P09936 223 aa4.7□□□□□ -1.66
PDLIM1-203ENST00000490391 FCGR1AP12314 374 aa4.7□□□□□ -1.66
PDLIM1-203ENST00000490391 MYL12AP19105 171 aa4.7□□□□□ -1.66
PDLIM1-203ENST00000490391 PSMB3P49720 205 aa4.7□□□□□ -1.66
PDLIM1-203ENST00000490391 ST3GAL4Q11206 333 aa4.7□□□□□ -1.66
PDLIM1-203ENST00000490391 CATR1Q13166 79 aa4.7□□□□□ -1.66
PDLIM1-203ENST00000490391 RAB11BQ15907 218 aa4.7□□□□□ -1.66
PDLIM1-203ENST00000490391 TIGITQ495A1 244 aa4.7□□□□□ -1.66
PDLIM1-203ENST00000490391 HSD17B12Q53GQ0 312 aa4.7□□□□□ -1.66
PDLIM1-203ENST00000490391 ZBTB34Q8NCN2 500 aa4.7□□□□□ -1.66
PDLIM1-203ENST00000490391 OR10J6PQ8NGY7 276 aa4.7□□□□□ -1.66
PDLIM1-203ENST00000490391 OR51H1Q8NH63 302 aa4.7□□□□□ -1.66
PDLIM1-203ENST00000490391 TMEM230Q96A57 120 aa4.7□□□□□ -1.66
PDLIM1-203ENST00000490391 GPR146Q96CH1 333 aa4.7□□□□□ -1.66
PDLIM1-203ENST00000490391 LINC00467Q9BRT7 94 aa4.7□□□□□ -1.66
PDLIM1-203ENST00000490391 CHAC1Q9BUX1 264 aa4.7□□□□□ -1.66
PDLIM1-203ENST00000490391 NOP10Q9NPE3 64 aaKnown RBP4.7□□□□□ -1.66
PDLIM1-203ENST00000490391 PRNDQ9UKY0 176 aa4.7□□□□□ -1.66
PDLIM1-203ENST00000490391 AP4S1Q9Y587 144 aa4.7□□□□□ -1.66
PDLIM1-203ENST00000490391 TIMM8BQ9Y5J9 83 aaPredicted RBP4.7□□□□□ -1.66
PDLIM1-203ENST00000490391 K7EP13 123 aa4.69□□□□□ -1.66
PDLIM1-203ENST00000490391 M0R2Z0 102 aa4.69□□□□□ -1.66
PDLIM1-203ENST00000490391 SNAPC5O75971 98 aa4.69□□□□□ -1.66
PDLIM1-203ENST00000490391 KRASP01116 189 aa4.69□□□□□ -1.66
PDLIM1-203ENST00000490391 G6PCP35575 357 aa4.69□□□□□ -1.66
PDLIM1-203ENST00000490391 TALDO1P37837 337 aa4.69□□□□□ -1.66
PDLIM1-203ENST00000490391 ERVK-16P61578 105 aa4.69□□□□□ -1.66
PDLIM1-203ENST00000490391 B2MP61769 119 aa4.69□□□□□ -1.66
PDLIM1-203ENST00000490391 PRCDQ00LT1 54 aa4.69□□□□□ -1.66
PDLIM1-203ENST00000490391 SPINK13Q1W4C9 94 aa4.69□□□□□ -1.66
PDLIM1-203ENST00000490391 ZNF818PQ6ZRF7 136 aa4.69□□□□□ -1.66
PDLIM1-203ENST00000490391 TPRA1Q86W33 373 aa4.69□□□□□ -1.66
PDLIM1-203ENST00000490391 BAP18Q8IXM2 172 aa4.69□□□□□ -1.66
PDLIM1-203ENST00000490391 OR4X1Q8NH49 305 aa4.69□□□□□ -1.66
PDLIM1-203ENST00000490391 CIRBP-AS1Q8TBR5 109 aa4.69□□□□□ -1.66
PDLIM1-203ENST00000490391 LGALS14Q8TCE9 139 aa4.69□□□□□ -1.66
PDLIM1-203ENST00000490391 RNASE8Q8TDE3 154 aaKnown RBP4.69□□□□□ -1.66
PDLIM1-203ENST00000490391 FCAMRQ8WWV6 532 aa4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms