RNA–Protein interactions for RNA: ENST00000488937.1

PRPF4-203, Transcript of pre-mRNA processing factor 4, humanhuman

TSL 3

Gene PRPF4, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-203ENST00000488937 CDS2O95674 445 aa2.11□□□□□ -2.07
PRPF4-203ENST00000488937 IGF2P01344 180 aa2.11□□□□□ -2.07
PRPF4-203ENST00000488937 IGHV1-69P01742 117 aa2.11□□□□□ -2.07
PRPF4-203ENST00000488937 IGKV1-16P04430 117 aa2.11□□□□□ -2.07
PRPF4-203ENST00000488937 UCHL1P09936 223 aa2.11□□□□□ -2.07
PRPF4-203ENST00000488937 CMPK1P30085 196 aa2.11□□□□□ -2.07
PRPF4-203ENST00000488937 FXYD7P58549 80 aa2.11□□□□□ -2.07
PRPF4-203ENST00000488937 SELENOWP63302 87 aa2.11□□□□□ -2.07
PRPF4-203ENST00000488937 ZNF79Q15937 498 aa2.11□□□□□ -2.07
PRPF4-203ENST00000488937 SPANXN3Q5MJ09 141 aa2.11□□□□□ -2.07
PRPF4-203ENST00000488937 AMMECR1LQ6DCA0 310 aa2.11□□□□□ -2.07
PRPF4-203ENST00000488937 TMEM14EPQ6UXP3 125 aa2.11□□□□□ -2.07
PRPF4-203ENST00000488937 LYZL2Q7Z4W2 148 aa2.11□□□□□ -2.07
PRPF4-203ENST00000488937 BPIFB6Q8NFQ5 453 aa2.11□□□□□ -2.07
PRPF4-203ENST00000488937 WFDC5Q8TCV5 224 aa2.11□□□□□ -2.07
PRPF4-203ENST00000488937 TMEM203Q969S6 136 aa2.11□□□□□ -2.07
PRPF4-203ENST00000488937 ZC2HC1AQ96GY0 325 aa2.11□□□□□ -2.07
PRPF4-203ENST00000488937 C12orf57Q99622 126 aa2.11□□□□□ -2.07
PRPF4-203ENST00000488937 PRADC1Q9BSG0 188 aa2.11□□□□□ -2.07
PRPF4-203ENST00000488937 TTTY13Q9BZ97 58 aa2.11□□□□□ -2.07
PRPF4-203ENST00000488937 CKLFQ9UBR5 152 aa2.11□□□□□ -2.07
PRPF4-203ENST00000488937 NAT8BQ9UHF3 227 aa2.11□□□□□ -2.07
PRPF4-203ENST00000488937 HS3ST2Q9Y278 367 aa2.11□□□□□ -2.07
PRPF4-203ENST00000488937 ZNF443Q9Y2A4 671 aaPredicted RBP2.11□□□□□ -2.07
PRPF4-203ENST00000488937 NCAPD3P42695 1498 aa2.11□□□□□ -2.07
PRPF4-203ENST00000488937 WDR90Q96KV7 1748 aa2.11□□□□□ -2.07
PRPF4-203ENST00000488937 MED1Q15648 1581 aaPredicted RBP2.1□□□□□ -2.07
PRPF4-203ENST00000488937 PRG4Q92954 1404 aaPredicted RBP2.1□□□□□ -2.07
PRPF4-203ENST00000488937 IGLV4-69A0A075B6H9 119 aa2.1□□□□□ -2.07
PRPF4-203ENST00000488937 IGHV3-15A0A0B4J1V0 119 aa2.1□□□□□ -2.07
PRPF4-203ENST00000488937 A0A0B4J2C4 111 aa2.1□□□□□ -2.07
PRPF4-203ENST00000488937 IGHV1-58A0A0C4DH39 117 aa2.1□□□□□ -2.07
PRPF4-203ENST00000488937 IRGMA1A4Y4 181 aa2.1□□□□□ -2.07
PRPF4-203ENST00000488937 GRIFINA4D1Z8 144 aa2.1□□□□□ -2.07
PRPF4-203ENST00000488937 A8MWP6 167 aa2.1□□□□□ -2.07
PRPF4-203ENST00000488937 C16orf90A8MZG2 172 aa2.1□□□□□ -2.07
PRPF4-203ENST00000488937 TMEM256-PLSCR3K7ERE1 68 aa2.1□□□□□ -2.07
PRPF4-203ENST00000488937 OR2T1O43869 369 aa2.1□□□□□ -2.07
PRPF4-203ENST00000488937 DPM2O94777 84 aa2.1□□□□□ -2.07
PRPF4-203ENST00000488937 SOD1P00441 154 aa2.1□□□□□ -2.07
PRPF4-203ENST00000488937 NPYP01303 97 aa2.1□□□□□ -2.07
PRPF4-203ENST00000488937 HLA-DMBP28068 263 aa2.1□□□□□ -2.07
PRPF4-203ENST00000488937 KRTAP12-2P59991 146 aa2.1□□□□□ -2.07
PRPF4-203ENST00000488937 YPEL3P61236 119 aaPredicted RBP2.1□□□□□ -2.07
PRPF4-203ENST00000488937 MEF2BQ02080 365 aaPredicted RBP2.1□□□□□ -2.07
PRPF4-203ENST00000488937 AKR1C1Q04828 323 aa2.1□□□□□ -2.07
PRPF4-203ENST00000488937 KISS1Q15726 138 aa2.1□□□□□ -2.07
PRPF4-203ENST00000488937 LDLRAD2Q5SZI1 272 aa2.1□□□□□ -2.07
PRPF4-203ENST00000488937 SAXO1Q8IYX7 474 aa2.1□□□□□ -2.07
PRPF4-203ENST00000488937 OR2T10Q8NGZ9 312 aa2.1□□□□□ -2.07
PRPF4-203ENST00000488937 TMEM106AQ96A25 262 aa2.1□□□□□ -2.07
PRPF4-203ENST00000488937 MND1Q9BWT6 205 aa2.1□□□□□ -2.07
PRPF4-203ENST00000488937 LINC00470Q9BZP3 86 aa2.1□□□□□ -2.07
PRPF4-203ENST00000488937 CACYBPQ9HB71 228 aaKnown RBP2.1□□□□□ -2.07
PRPF4-203ENST00000488937 OR5AC2Q9NZP5 309 aa2.1□□□□□ -2.07
PRPF4-203ENST00000488937 RBM7Q9Y580 266 aaKnown RBP2.1□□□□□ -2.07
PRPF4-203ENST00000488937 TANC2Q9HCD6 1990 aa2.1□□□□□ -2.07
PRPF4-203ENST00000488937 SCN8AQ9UQD0 1980 aa2.1□□□□□ -2.07
PRPF4-203ENST00000488937 EIF4G3O43432 1585 aaKnown RBP2.1□□□□□ -2.07
PRPF4-203ENST00000488937 CROCCQ5TZA2 2017 aa2.1□□□□□ -2.07
PRPF4-203ENST00000488937 MALRD1Q5VYJ5 2156 aa2.09□□□□□ -2.07
PRPF4-203ENST00000488937 ZFC3H1O60293 1989 aaKnown RBP2.09□□□□□ -2.07
PRPF4-203ENST00000488937 PTPRBP23467 1997 aa2.09□□□□□ -2.07
PRPF4-203ENST00000488937 MYH9P35579 1960 aaKnown RBP2.09□□□□□ -2.07
PRPF4-203ENST00000488937 SCN9AQ15858 1988 aa2.09□□□□□ -2.07
PRPF4-203ENST00000488937 CCDC88CQ9P219 2028 aa2.09□□□□□ -2.07
PRPF4-203ENST00000488937 A0A087X0T9 212 aa2.09□□□□□ -2.07
PRPF4-203ENST00000488937 IGHV3-73A0A0B4J1V6 119 aa2.09□□□□□ -2.07
PRPF4-203ENST00000488937 LOC107984640A0A0U1RRK4 108 aa2.09□□□□□ -2.07
PRPF4-203ENST00000488937 C17orf98A8MV24 154 aa2.09□□□□□ -2.07
PRPF4-203ENST00000488937 LYZL6O75951 148 aa2.09□□□□□ -2.07
PRPF4-203ENST00000488937 IGHV3-53P01767 116 aa2.09□□□□□ -2.07
PRPF4-203ENST00000488937 IGHV3-7P01780 117 aa2.09□□□□□ -2.07
PRPF4-203ENST00000488937 IGLV7-43P04211 117 aa2.09□□□□□ -2.07
PRPF4-203ENST00000488937 ZNF19P17023 458 aa2.09□□□□□ -2.07
PRPF4-203ENST00000488937 LGALS3P17931 250 aaKnown RBP2.09□□□□□ -2.07
PRPF4-203ENST00000488937 CSRP1P21291 193 aaKnown RBP2.09□□□□□ -2.07
PRPF4-203ENST00000488937 CD24P25063 80 aa2.09□□□□□ -2.07
PRPF4-203ENST00000488937 S100A4P26447 101 aaKnown RBP2.09□□□□□ -2.07
PRPF4-203ENST00000488937 NCS1P62166 190 aa2.09□□□□□ -2.07
PRPF4-203ENST00000488937 FUT5Q11128 374 aa2.09□□□□□ -2.07
PRPF4-203ENST00000488937 MIAQ16674 131 aa2.09□□□□□ -2.07
PRPF4-203ENST00000488937 VMA21Q3ZAQ7 101 aa2.09□□□□□ -2.07
PRPF4-203ENST00000488937 FAM229BQ4G0N7 80 aa2.09□□□□□ -2.07
PRPF4-203ENST00000488937 TMEM69Q5SWH9 247 aa2.09□□□□□ -2.07
PRPF4-203ENST00000488937 ZNF660Q6AZW8 331 aaPredicted RBP2.09□□□□□ -2.07
PRPF4-203ENST00000488937 DYNAPQ8N1N2 210 aa2.09□□□□□ -2.07
PRPF4-203ENST00000488937 RNF175Q8N4F7 328 aa2.09□□□□□ -2.07
PRPF4-203ENST00000488937 C3orf56Q8N813 242 aa2.09□□□□□ -2.07
PRPF4-203ENST00000488937 APCDD1LQ8NCL9 501 aa2.09□□□□□ -2.07
PRPF4-203ENST00000488937 Q8NDZ9 215 aa2.09□□□□□ -2.07
PRPF4-203ENST00000488937 TSTD1Q8NFU3 115 aa2.09□□□□□ -2.07
PRPF4-203ENST00000488937 OR8D4Q8NGM9 314 aa2.09□□□□□ -2.07
PRPF4-203ENST00000488937 MGLLQ99685 303 aa2.09□□□□□ -2.07
PRPF4-203ENST00000488937 MRPL32Q9BYC8 188 aaKnown RBP2.09□□□□□ -2.07
PRPF4-203ENST00000488937 SMIM3Q9BZL3 60 aa2.09□□□□□ -2.07
PRPF4-203ENST00000488937 CBLN4Q9NTU7 201 aa2.09□□□□□ -2.07
PRPF4-203ENST00000488937 SLC39A9Q9NUM3 307 aa2.09□□□□□ -2.07
PRPF4-203ENST00000488937 MCTS1Q9ULC4 181 aaKnown RBP2.09□□□□□ -2.07
PRPF4-203ENST00000488937 S4R3C0 116 aa2.09□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms