RNA–Protein interactions for RNA: ENST00000487709.1

HMGB1P36-201, Transcript of high mobility group box 1 pseudogene 36, humanhuman

BASIC

Gene HMGB1P36, Length 576 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P36-201ENST00000487709 PXDNLA1KZ92 1463 aa1.43□□□□□ -2.18
HMGB1P36-201ENST00000487709 CACNA1SQ13698 1873 aa1.43□□□□□ -2.18
HMGB1P36-201ENST00000487709 MDC1Q14676 2089 aaKnown RBP1.43□□□□□ -2.18
HMGB1P36-201ENST00000487709 SETD5Q9C0A6 1442 aa1.43□□□□□ -2.18
HMGB1P36-201ENST00000487709 MEIKINA0A087WXM9 373 aa1.43□□□□□ -2.18
HMGB1P36-201ENST00000487709 C1orf196B1AJZ1 125 aa1.43□□□□□ -2.18
HMGB1P36-201ENST00000487709 F8W036 122 aa1.43□□□□□ -2.18
HMGB1P36-201ENST00000487709 TRAPPC2LH3BP13 241 aa1.43□□□□□ -2.18
HMGB1P36-201ENST00000487709 C19orf84I3L1E1 186 aa1.43□□□□□ -2.18
HMGB1P36-201ENST00000487709 KPNA4O00629 521 aaPredicted RBP1.43□□□□□ -2.18
HMGB1P36-201ENST00000487709 SLC22A1O15245 554 aa1.43□□□□□ -2.18
HMGB1P36-201ENST00000487709 GADD45GO95257 159 aa1.43□□□□□ -2.18
HMGB1P36-201ENST00000487709 CSN2P05814 226 aa1.43□□□□□ -2.18
HMGB1P36-201ENST00000487709 MSMBP08118 114 aa1.43□□□□□ -2.18
HMGB1P36-201ENST00000487709 OGNP20774 298 aaKnown RBP1.43□□□□□ -2.18
HMGB1P36-201ENST00000487709 NFYAP23511 347 aaPredicted RBP1.43□□□□□ -2.18
HMGB1P36-201ENST00000487709 SRP14P37108 136 aaKnown RBP1.43□□□□□ -2.18
HMGB1P36-201ENST00000487709 EIF5AP63241 154 aaKnown RBP1.43□□□□□ -2.18
HMGB1P36-201ENST00000487709 RRN3P1Q2M238 152 aa1.43□□□□□ -2.18
HMGB1P36-201ENST00000487709 KRTAP13-4Q3LI77 160 aa1.43□□□□□ -2.18
HMGB1P36-201ENST00000487709 KTN1-AS1Q86SY8 53 aa1.43□□□□□ -2.18
HMGB1P36-201ENST00000487709 ANGPTL5Q86XS5 388 aa1.43□□□□□ -2.18
HMGB1P36-201ENST00000487709 BPIFA4PQ86YQ2 179 aa1.43□□□□□ -2.18
HMGB1P36-201ENST00000487709 IFT20Q8IY31 132 aa1.43□□□□□ -2.18
HMGB1P36-201ENST00000487709 C11orf40Q8WZ69 217 aa1.43□□□□□ -2.18
HMGB1P36-201ENST00000487709 BORCS5Q969J3 196 aa1.43□□□□□ -2.18
HMGB1P36-201ENST00000487709 ISOC1Q96CN7 298 aa1.43□□□□□ -2.18
HMGB1P36-201ENST00000487709 RMND5BQ96G75 393 aaPredicted RBP1.43□□□□□ -2.18
HMGB1P36-201ENST00000487709 HSPB9Q9BQS6 159 aa1.43□□□□□ -2.18
HMGB1P36-201ENST00000487709 GINS4Q9BRT9 223 aa1.43□□□□□ -2.18
HMGB1P36-201ENST00000487709 ERGIC3Q9Y282 383 aa1.43□□□□□ -2.18
HMGB1P36-201ENST00000487709 LAMTOR2Q9Y2Q5 125 aa1.43□□□□□ -2.18
HMGB1P36-201ENST00000487709 ADAMTSL1Q8N6G6 1762 aa1.42□□□□□ -2.18
HMGB1P36-201ENST00000487709 RTTNQ86VV8 2226 aa1.42□□□□□ -2.18
HMGB1P36-201ENST00000487709 TRGV2A0A075B6R0 118 aa1.42□□□□□ -2.18
HMGB1P36-201ENST00000487709 MDFIC2A0A1B0GVS7 189 aa1.42□□□□□ -2.18
HMGB1P36-201ENST00000487709 RFPL4AA6NLU0 287 aa1.42□□□□□ -2.18
HMGB1P36-201ENST00000487709 RFPL4AL1F8VTS6 287 aa1.42□□□□□ -2.18
HMGB1P36-201ENST00000487709 BUB1B-PAK6H3BSN5 160 aa1.42□□□□□ -2.18
HMGB1P36-201ENST00000487709 M0QZK8 103 aa1.42□□□□□ -2.18
HMGB1P36-201ENST00000487709 ARPC5O15511 151 aa1.42□□□□□ -2.18
HMGB1P36-201ENST00000487709 GGCTO75223 188 aaKnown RBP1.42□□□□□ -2.18
HMGB1P36-201ENST00000487709 BPGMP07738 259 aa1.42□□□□□ -2.18
HMGB1P36-201ENST00000487709 SRIP30626 198 aa1.42□□□□□ -2.18
HMGB1P36-201ENST00000487709 CCR2P41597 374 aa1.42□□□□□ -2.18
HMGB1P36-201ENST00000487709 EIF2B2P49770 351 aaKnown RBP1.42□□□□□ -2.18
HMGB1P36-201ENST00000487709 ZNF80P51504 273 aaPredicted RBP1.42□□□□□ -2.18
HMGB1P36-201ENST00000487709 CDC42P60953 191 aa1.42□□□□□ -2.18
HMGB1P36-201ENST00000487709 HES1Q14469 280 aa1.42□□□□□ -2.18
HMGB1P36-201ENST00000487709 LTC4SQ16873 150 aa1.42□□□□□ -2.18
HMGB1P36-201ENST00000487709 LYZL1Q6UWQ5 148 aa1.42□□□□□ -2.18
HMGB1P36-201ENST00000487709 MIR17HGQ75NE6 70 aa1.42□□□□□ -2.18
HMGB1P36-201ENST00000487709 HIST3H2BBQ8N257 126 aa1.42□□□□□ -2.18
HMGB1P36-201ENST00000487709 OR8D4Q8NGM9 314 aa1.42□□□□□ -2.18
HMGB1P36-201ENST00000487709 YPEL2Q96QA6 119 aa1.42□□□□□ -2.18
HMGB1P36-201ENST00000487709 IMMP2LQ96T52 175 aa1.42□□□□□ -2.18
HMGB1P36-201ENST00000487709 RTL8AQ9BWD3 113 aa1.42□□□□□ -2.18
HMGB1P36-201ENST00000487709 OR8D2Q9GZM6 311 aa1.42□□□□□ -2.18
HMGB1P36-201ENST00000487709 FAM107BQ9H098 131 aa1.42□□□□□ -2.18
HMGB1P36-201ENST00000487709 TMEM138Q9NPI0 162 aa1.42□□□□□ -2.18
HMGB1P36-201ENST00000487709 OSTCQ9NRP0 149 aa1.42□□□□□ -2.18
HMGB1P36-201ENST00000487709 GSKIPQ9P0R6 139 aa1.42□□□□□ -2.18
HMGB1P36-201ENST00000487709 PRO2289Q9P1D8 64 aa1.42□□□□□ -2.18
HMGB1P36-201ENST00000487709 NAT8Q9UHE5 227 aa1.42□□□□□ -2.18
HMGB1P36-201ENST00000487709 PCTPQ9UKL6 214 aa1.42□□□□□ -2.18
HMGB1P36-201ENST00000487709 ASB4Q9Y574 426 aa1.42□□□□□ -2.18
HMGB1P36-201ENST00000487709 NUBP2Q9Y5Y2 271 aa1.42□□□□□ -2.18
HMGB1P36-201ENST00000487709 COL5A3P25940 1745 aaPredicted RBP1.42□□□□□ -2.18
HMGB1P36-201ENST00000487709 KIAA2026Q5HYC2 2103 aa1.42□□□□□ -2.18
HMGB1P36-201ENST00000487709 A0A087X0T9 212 aa1.41□□□□□ -2.18
HMGB1P36-201ENST00000487709 H3BT86 120 aa1.41□□□□□ -2.18
HMGB1P36-201ENST00000487709 TAX1BP3O14907 124 aa1.41□□□□□ -2.18
HMGB1P36-201ENST00000487709 TCL1BO95988 128 aa1.41□□□□□ -2.18
HMGB1P36-201ENST00000487709 PPBPP02775 128 aa1.41□□□□□ -2.18
HMGB1P36-201ENST00000487709 TRGC2P03986 189 aa1.41□□□□□ -2.18
HMGB1P36-201ENST00000487709 CCL5P13501 91 aa1.41□□□□□ -2.18
HMGB1P36-201ENST00000487709 NFYBP25208 207 aa1.41□□□□□ -2.18
HMGB1P36-201ENST00000487709 RPL28P46779 137 aaKnown RBP1.41□□□□□ -2.18
HMGB1P36-201ENST00000487709 CCDC153Q494R4 210 aa1.41□□□□□ -2.18
HMGB1P36-201ENST00000487709 LINC01554Q52M75 96 aa1.41□□□□□ -2.18
HMGB1P36-201ENST00000487709 BRMS1LQ5PSV4 323 aa1.41□□□□□ -2.18
HMGB1P36-201ENST00000487709 FKBP1CQ5VVH2 108 aa1.41□□□□□ -2.18
HMGB1P36-201ENST00000487709 DPPA3Q6W0C5 159 aa1.41□□□□□ -2.18
HMGB1P36-201ENST00000487709 DHFR2Q86XF0 187 aa1.41□□□□□ -2.18
HMGB1P36-201ENST00000487709 TMEM86AQ8N2M4 240 aa1.41□□□□□ -2.18
HMGB1P36-201ENST00000487709 ST6GALNAC3Q8NDV1 305 aa1.41□□□□□ -2.18
HMGB1P36-201ENST00000487709 OR51T1Q8NGJ9 327 aa1.41□□□□□ -2.18
HMGB1P36-201ENST00000487709 TERB2Q8NHR7 220 aa1.41□□□□□ -2.18
HMGB1P36-201ENST00000487709 PPTC7Q8NI37 304 aa1.41□□□□□ -2.18
HMGB1P36-201ENST00000487709 THEM6Q8WUY1 208 aa1.41□□□□□ -2.18
HMGB1P36-201ENST00000487709 CANT1Q8WVQ1 401 aa1.41□□□□□ -2.18
HMGB1P36-201ENST00000487709 SLAMF6Q96DU3 332 aa1.41□□□□□ -2.18
HMGB1P36-201ENST00000487709 TCEAL4Q96EI5 215 aa1.41□□□□□ -2.18
HMGB1P36-201ENST00000487709 ADAT3Q96EY9 351 aaPredicted RBP1.41□□□□□ -2.18
HMGB1P36-201ENST00000487709 NAA38Q9BRA0 125 aaKnown RBP1.41□□□□□ -2.18
HMGB1P36-201ENST00000487709 OR52A1Q9UKL2 312 aa1.41□□□□□ -2.18
HMGB1P36-201ENST00000487709 RBM7Q9Y580 266 aaKnown RBP1.41□□□□□ -2.18
HMGB1P36-201ENST00000487709 ARHGEF10O15013 1369 aa1.41□□□□□ -2.18
HMGB1P36-201ENST00000487709 MUC6Q6W4X9 2439 aa1.41□□□□□ -2.18
HMGB1P36-201ENST00000487709 TMSB15BA0A087X1C1 80 aa1.4□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms