RNA–Protein interactions for RNA: ENST00000486016.1

GCFC2-209, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

TSL 3

Gene GCFC2, Length 595 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-209ENST00000486016 BAALC-AS2P0C853 105 aa0.68□□□□□ -2.3
GCFC2-209ENST00000486016 SMIM17P0DL12 118 aa0.68□□□□□ -2.3
GCFC2-209ENST00000486016 MGST1P10620 155 aaKnown RBP0.68□□□□□ -2.3
GCFC2-209ENST00000486016 PPIBP23284 216 aaKnown RBP0.68□□□□□ -2.3
GCFC2-209ENST00000486016 CASP1P29466 404 aa0.68□□□□□ -2.3
GCFC2-209ENST00000486016 DEFA3P59666 94 aa0.68□□□□□ -2.3
GCFC2-209ENST00000486016 ERVS71-1P61550 626 aa0.68□□□□□ -2.3
GCFC2-209ENST00000486016 PDE6HQ13956 83 aa0.68□□□□□ -2.3
GCFC2-209ENST00000486016 RNASE10Q5GAN6 216 aaKnown RBP0.68□□□□□ -2.3
GCFC2-209ENST00000486016 OOSP2Q86WS3 158 aa0.68□□□□□ -2.3
GCFC2-209ENST00000486016 OR52L1Q8NGH7 329 aa0.68□□□□□ -2.3
GCFC2-209ENST00000486016 OR13D1Q8NGV5 346 aa0.68□□□□□ -2.3
GCFC2-209ENST00000486016 SLC25A40Q8TBP6 338 aa0.68□□□□□ -2.3
GCFC2-209ENST00000486016 WFDC5Q8TCV5 224 aa0.68□□□□□ -2.3
GCFC2-209ENST00000486016 C2orf50Q96LR7 162 aa0.68□□□□□ -2.3
GCFC2-209ENST00000486016 TLNRD1Q9H1K6 362 aa0.68□□□□□ -2.3
GCFC2-209ENST00000486016 FBXO5Q9UKT4 447 aa0.68□□□□□ -2.3
GCFC2-209ENST00000486016 MED12LQ86YW9 2145 aa0.68□□□□□ -2.3
GCFC2-209ENST00000486016 DLG5Q8TDM6 1919 aa0.68□□□□□ -2.3
GCFC2-209ENST00000486016 ANAPC1Q9H1A4 1944 aa0.68□□□□□ -2.3
GCFC2-209ENST00000486016 ALPK2Q86TB3 2170 aa0.67□□□□□ -2.3
GCFC2-209ENST00000486016 A0A087WX48 190 aa0.67□□□□□ -2.3
GCFC2-209ENST00000486016 A0A087X0T9 212 aa0.67□□□□□ -2.3
GCFC2-209ENST00000486016 TRAV3A0A0B4J244 114 aa0.67□□□□□ -2.3
GCFC2-209ENST00000486016 C1orf196B1AJZ1 125 aa0.67□□□□□ -2.3
GCFC2-209ENST00000486016 LYZL6O75951 148 aa0.67□□□□□ -2.3
GCFC2-209ENST00000486016 S100A6P06703 90 aa0.67□□□□□ -2.3
GCFC2-209ENST00000486016 CTXN2P0C2S0 81 aa0.67□□□□□ -2.3
GCFC2-209ENST00000486016 ZNF93P35789 620 aaPredicted RBP0.67□□□□□ -2.3
GCFC2-209ENST00000486016 AP3S2P59780 193 aa0.67□□□□□ -2.3
GCFC2-209ENST00000486016 RAB4BP61018 213 aa0.67□□□□□ -2.3
GCFC2-209ENST00000486016 RHOGP84095 191 aa0.67□□□□□ -2.3
GCFC2-209ENST00000486016 Q6Q795 121 aa0.67□□□□□ -2.3
GCFC2-209ENST00000486016 LCA10Q71F78 164 aa0.67□□□□□ -2.3
GCFC2-209ENST00000486016 ADAT3Q96EY9 351 aaPredicted RBP0.67□□□□□ -2.3
GCFC2-209ENST00000486016 SIGMAR1Q99720 223 aa0.67□□□□□ -2.3
GCFC2-209ENST00000486016 TVP23BQ9NYZ1 205 aa0.67□□□□□ -2.3
GCFC2-209ENST00000486016 EPDR1Q9UM22 224 aa0.67□□□□□ -2.3
GCFC2-209ENST00000486016 C22orf24Q9Y442 160 aa0.67□□□□□ -2.3
GCFC2-209ENST00000486016 CACNA1BQ00975 2339 aa0.67□□□□□ -2.3
GCFC2-209ENST00000486016 TECTAO75443 2155 aa0.67□□□□□ -2.3
GCFC2-209ENST00000486016 POLEQ07864 2286 aa0.67□□□□□ -2.3
GCFC2-209ENST00000486016 NOTCH1P46531 2555 aa0.66□□□□□ -2.3
GCFC2-209ENST00000486016 IGKV1-9A0A0C4DH69 117 aa0.66□□□□□ -2.3
GCFC2-209ENST00000486016 CYB5BO43169 146 aa0.66□□□□□ -2.3
GCFC2-209ENST00000486016 SULT1B1O43704 296 aa0.66□□□□□ -2.3
GCFC2-209ENST00000486016 HYPMO75409 117 aa0.66□□□□□ -2.3
GCFC2-209ENST00000486016 OR7C1O76099 320 aaPredicted RBP0.66□□□□□ -2.3
GCFC2-209ENST00000486016 SRIP30626 198 aa0.66□□□□□ -2.3
GCFC2-209ENST00000486016 FADDQ13158 208 aa0.66□□□□□ -2.3
GCFC2-209ENST00000486016 BRMS1LQ5PSV4 323 aa0.66□□□□□ -2.3
GCFC2-209ENST00000486016 FAM19A2Q8N3H0 131 aa0.66□□□□□ -2.3
GCFC2-209ENST00000486016 OR8D4Q8NGM9 314 aa0.66□□□□□ -2.3
GCFC2-209ENST00000486016 OR10J5Q8NHC4 309 aa0.66□□□□□ -2.3
GCFC2-209ENST00000486016 SFT2D1Q8WV19 159 aa0.66□□□□□ -2.3
GCFC2-209ENST00000486016 HIST1H2BLQ99880 126 aa0.66□□□□□ -2.3
GCFC2-209ENST00000486016 RNF122Q9H9V4 155 aa0.66□□□□□ -2.3
GCFC2-209ENST00000486016 NHP2Q9NX24 153 aaKnown RBP0.66□□□□□ -2.3
GCFC2-209ENST00000486016 KLK9Q9UKQ9 250 aa0.66□□□□□ -2.3
GCFC2-209ENST00000486016 HS3ST2Q9Y278 367 aa0.66□□□□□ -2.3
GCFC2-209ENST00000486016 SLC35A3Q9Y2D2 325 aa0.66□□□□□ -2.3
GCFC2-209ENST00000486016 UTP11Q9Y3A2 253 aaKnown RBP0.66□□□□□ -2.3
GCFC2-209ENST00000486016 ZNF106Q9H2Y7 1883 aaKnown RBP0.66□□□□□ -2.3
GCFC2-209ENST00000486016 RTL1A6NKG5 1358 aa0.66□□□□□ -2.3
GCFC2-209ENST00000486016 ECM29Q5VYK3 1845 aa0.66□□□□□ -2.3
GCFC2-209ENST00000486016 MED1Q15648 1581 aaPredicted RBP0.66□□□□□ -2.3
GCFC2-209ENST00000486016 LOC110117498A0A087WWA1 95 aa0.65□□□□□ -2.31
GCFC2-209ENST00000486016 TRBV6-7A0A0A0MS04 114 aa0.65□□□□□ -2.31
GCFC2-209ENST00000486016 TRBV6-8A0A0A6YYG3 113 aa0.65□□□□□ -2.31
GCFC2-209ENST00000486016 TRAV12-1A0A0B4J245 112 aa0.65□□□□□ -2.31
GCFC2-209ENST00000486016 C7orf71A4D174 169 aa0.65□□□□□ -2.31
GCFC2-209ENST00000486016 CLDN25C9JDP6 229 aa0.65□□□□□ -2.31
GCFC2-209ENST00000486016 SERPINB9P50453 376 aa0.65□□□□□ -2.31
GCFC2-209ENST00000486016 CNBPP62633 177 aaKnown RBP0.65□□□□□ -2.31
GCFC2-209ENST00000486016 SPA17Q15506 151 aa0.65□□□□□ -2.31
GCFC2-209ENST00000486016 TSNQ15631 228 aaKnown RBP0.65□□□□□ -2.31
GCFC2-209ENST00000486016 ESRGQ1W209 222 aa0.65□□□□□ -2.31
GCFC2-209ENST00000486016 DEFB113Q30KQ7 82 aa0.65□□□□□ -2.31
GCFC2-209ENST00000486016 LIN52Q52LA3 116 aa0.65□□□□□ -2.31
GCFC2-209ENST00000486016 FAM172AQ8WUF8 416 aa0.65□□□□□ -2.31
GCFC2-209ENST00000486016 BTF3L4Q96K17 158 aa0.65□□□□□ -2.31
GCFC2-209ENST00000486016 OBSCN-AS1Q96MR7 158 aa0.65□□□□□ -2.31
GCFC2-209ENST00000486016 KIFC1Q9BW19 673 aa0.65□□□□□ -2.31
GCFC2-209ENST00000486016 TMEM133Q9H2Q1 129 aa0.65□□□□□ -2.31
GCFC2-209ENST00000486016 NMNAT1Q9HAN9 279 aaPredicted RBP0.65□□□□□ -2.31
GCFC2-209ENST00000486016 PLXND1Q9Y4D7 1925 aa0.64□□□□□ -2.31
GCFC2-209ENST00000486016 J3QRK9 145 aa0.64□□□□□ -2.31
GCFC2-209ENST00000486016 PROSCO94903 275 aa0.64□□□□□ -2.31
GCFC2-209ENST00000486016 IFNA6P05013 189 aa0.64□□□□□ -2.31
GCFC2-209ENST00000486016 ERP29P30040 261 aaKnown RBP0.64□□□□□ -2.31
GCFC2-209ENST00000486016 RHOBP62745 196 aa0.64□□□□□ -2.31
GCFC2-209ENST00000486016 REEP5Q00765 189 aa0.64□□□□□ -2.31
GCFC2-209ENST00000486016 DEFB115Q30KQ5 88 aa0.64□□□□□ -2.31
GCFC2-209ENST00000486016 C1orf137Q5JT78 98 aa0.64□□□□□ -2.31
GCFC2-209ENST00000486016 C3orf56Q8N813 242 aa0.64□□□□□ -2.31
GCFC2-209ENST00000486016 GNPDA2Q8TDQ7 276 aa0.64□□□□□ -2.31
GCFC2-209ENST00000486016 ZNF418Q8TF45 676 aaPredicted RBP0.64□□□□□ -2.31
GCFC2-209ENST00000486016 ITFG2Q969R8 447 aa0.64□□□□□ -2.31
GCFC2-209ENST00000486016 DGCR14Q96DF8 476 aaKnown RBP0.64□□□□□ -2.31
GCFC2-209ENST00000486016 MRPL57Q9BQC6 102 aaKnown RBP0.64□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms