RNA–Protein interactions for RNA: ENST00000484441.1

CCDC66-219, Transcript of coiled-coil domain containing 66, humanhuman

TSL 1 (best)

Gene CCDC66, Length 302 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-219ENST00000484441 HDHD2Q9H0R4 259 aa-0.14□□□□□ -2.43
CCDC66-219ENST00000484441 LINC00846Q9NV44 126 aa-0.14□□□□□ -2.43
CCDC66-219ENST00000484441 DNAH6Q9C0G6 4158 aa-0.14□□□□□ -2.43
CCDC66-219ENST00000484441 KCPQ6ZWJ8 1503 aa-0.14□□□□□ -2.43
CCDC66-219ENST00000484441 AKAP6Q13023 2319 aa-0.14□□□□□ -2.43
CCDC66-219ENST00000484441 KNL1Q8NG31 2342 aa-0.14□□□□□ -2.43
CCDC66-219ENST00000484441 HTTP42858 3142 aa-0.14□□□□□ -2.43
CCDC66-219ENST00000484441 RELNP78509 3460 aa-0.14□□□□□ -2.43
CCDC66-219ENST00000484441 MED13LQ71F56 2210 aa-0.14□□□□□ -2.43
CCDC66-219ENST00000484441 PI4KAP42356 2102 aa-0.14□□□□□ -2.43
CCDC66-219ENST00000484441 ATMQ13315 3056 aa-0.15□□□□□ -2.43
CCDC66-219ENST00000484441 VPS13DQ5THJ4 4388 aa-0.15□□□□□ -2.43
CCDC66-219ENST00000484441 FRYLO94915 3013 aa-0.15□□□□□ -2.43
CCDC66-219ENST00000484441 USP34Q70CQ2 3546 aa-0.15□□□□□ -2.43
CCDC66-219ENST00000484441 VPS13CQ709C8 3753 aa-0.15□□□□□ -2.43
CCDC66-219ENST00000484441 TRPC5OSA6NMA1 111 aa-0.15□□□□□ -2.43
CCDC66-219ENST00000484441 ASIPP42127 132 aa-0.15□□□□□ -2.43
CCDC66-219ENST00000484441 Q5VSD8 79 aa-0.15□□□□□ -2.43
CCDC66-219ENST00000484441 CLEC6AQ6EIG7 209 aa-0.15□□□□□ -2.43
CCDC66-219ENST00000484441 DNAH17Q9UFH2 4485 aa-0.15□□□□□ -2.43
CCDC66-219ENST00000484441 PRUNE2Q8WUY3 3088 aa-0.15□□□□□ -2.43
CCDC66-219ENST00000484441 RANBP2P49792 3224 aaKnown RBP-0.15□□□□□ -2.43
CCDC66-219ENST00000484441 ASXL3Q9C0F0 2248 aa-0.15□□□□□ -2.43
CCDC66-219ENST00000484441 CDH23Q9H251 3354 aa-0.15□□□□□ -2.43
CCDC66-219ENST00000484441 ALPK3Q96L96 1907 aa-0.16□□□□□ -2.43
CCDC66-219ENST00000484441 FABP12A6NFH5 140 aa-0.16□□□□□ -2.44
CCDC66-219ENST00000484441 KCNJ8Q15842 424 aa-0.16□□□□□ -2.44
CCDC66-219ENST00000484441 BATFQ16520 125 aa-0.16□□□□□ -2.44
CCDC66-219ENST00000484441 KRTAP6-2Q3LI66 62 aa-0.16□□□□□ -2.44
CCDC66-219ENST00000484441 SPANXN5Q5MJ07 72 aa-0.16□□□□□ -2.44
CCDC66-219ENST00000484441 CST9Q5W186 159 aa-0.16□□□□□ -2.44
CCDC66-219ENST00000484441 SLC51BQ86UW2 128 aa-0.16□□□□□ -2.44
CCDC66-219ENST00000484441 OOSP2Q86WS3 158 aa-0.16□□□□□ -2.44
CCDC66-219ENST00000484441 FUNDC1Q8IVP5 155 aa-0.16□□□□□ -2.44
CCDC66-219ENST00000484441 SYCE1Q8N0S2 351 aa-0.16□□□□□ -2.44
CCDC66-219ENST00000484441 DEFB125Q8N687 156 aa-0.16□□□□□ -2.44
CCDC66-219ENST00000484441 DERL1Q9BUN8 251 aa-0.16□□□□□ -2.44
CCDC66-219ENST00000484441 ACER3Q9NUN7 267 aa-0.16□□□□□ -2.44
CCDC66-219ENST00000484441 SPENQ96T58 3664 aaKnown RBP-0.16□□□□□ -2.44
CCDC66-219ENST00000484441 BRCA2P51587 3418 aa-0.16□□□□□ -2.44
CCDC66-219ENST00000484441 VPS13AQ96RL7 3174 aa-0.16□□□□□ -2.44
CCDC66-219ENST00000484441 DNAJC13O75165 2243 aa-0.17□□□□□ -2.44
CCDC66-219ENST00000484441 DNAH14Q0VDD8 3507 aa-0.17□□□□□ -2.44
CCDC66-219ENST00000484441 UTRNP46939 3433 aa-0.17□□□□□ -2.44
CCDC66-219ENST00000484441 DOPEY2Q9Y3R5 2298 aa-0.17□□□□□ -2.44
CCDC66-219ENST00000484441 TRBV6-8A0A0A6YYG3 113 aa-0.17□□□□□ -2.44
CCDC66-219ENST00000484441 NCR3O14931 201 aa-0.17□□□□□ -2.44
CCDC66-219ENST00000484441 MT1BP07438 61 aa-0.17□□□□□ -2.44
CCDC66-219ENST00000484441 CRYGAP11844 174 aa-0.17□□□□□ -2.44
CCDC66-219ENST00000484441 SPI1P17947 270 aa-0.17□□□□□ -2.44
CCDC66-219ENST00000484441 PSMB6P28072 239 aa-0.17□□□□□ -2.44
CCDC66-219ENST00000484441 DCCP43146 1447 aa-0.17□□□□□ -2.44
CCDC66-219ENST00000484441 MAP2K4P45985 399 aa-0.17□□□□□ -2.44
CCDC66-219ENST00000484441 SPCS2Q15005 226 aa-0.17□□□□□ -2.44
CCDC66-219ENST00000484441 FMN1Q68DA7 1419 aa-0.17□□□□□ -2.44
CCDC66-219ENST00000484441 DNAJB3Q8WWF6 145 aa-0.17□□□□□ -2.44
CCDC66-219ENST00000484441 DCUN1D5Q9BTE7 237 aa-0.17□□□□□ -2.44
CCDC66-219ENST00000484441 TRRAPQ9Y4A5 3859 aa-0.17□□□□□ -2.44
CCDC66-219ENST00000484441 KDM6BO15054 1643 aa-0.17□□□□□ -2.44
CCDC66-219ENST00000484441 SMG1Q96Q15 3661 aaKnown RBP-0.17□□□□□ -2.44
CCDC66-219ENST00000484441 SPTBN5Q9NRC6 3674 aaKnown RBP-0.17□□□□□ -2.44
CCDC66-219ENST00000484441 PKDREJQ9NTG1 2253 aa-0.17□□□□□ -2.44
CCDC66-219ENST00000484441 CENPFP49454 3210 aa-0.17□□□□□ -2.44
CCDC66-219ENST00000484441 E9PCH4 1651 aa-0.18□□□□□ -2.44
CCDC66-219ENST00000484441 SPAG17Q6Q759 2223 aa-0.18□□□□□ -2.44
CCDC66-219ENST00000484441 TRBV20OR9-2A0A075B6H5 130 aa-0.18□□□□□ -2.44
CCDC66-219ENST00000484441 KCNK1O00180 336 aa-0.18□□□□□ -2.44
CCDC66-219ENST00000484441 SMR3BP02814 79 aaPredicted RBP-0.18□□□□□ -2.44
CCDC66-219ENST00000484441 MT1HL1P0DM35 61 aa-0.18□□□□□ -2.44
CCDC66-219ENST00000484441 GUK1Q16774 197 aa-0.18□□□□□ -2.44
CCDC66-219ENST00000484441 KRTAP8-1Q8IUC2 63 aa-0.18□□□□□ -2.44
CCDC66-219ENST00000484441 OR2T4Q8NH00 348 aa-0.18□□□□□ -2.44
CCDC66-219ENST00000484441 MIXL1Q9H2W2 232 aa-0.18□□□□□ -2.44
CCDC66-219ENST00000484441 PLAC8Q9NZF1 115 aa-0.18□□□□□ -2.44
CCDC66-219ENST00000484441 XIRP2A4UGR9 3374 aa-0.18□□□□□ -2.44
CCDC66-219ENST00000484441 ASPMQ8IZT6 3477 aa-0.18□□□□□ -2.44
CCDC66-219ENST00000484441 AKAP9Q99996 3911 aa-0.19□□□□□ -2.44
CCDC66-219ENST00000484441 ESPL1Q14674 2120 aa-0.19□□□□□ -2.44
CCDC66-219ENST00000484441 SYNJ1O43426 1573 aa-0.19□□□□□ -2.44
CCDC66-219ENST00000484441 LAMC3Q9Y6N6 1575 aa-0.19□□□□□ -2.44
CCDC66-219ENST00000484441 GOLGB1Q14789 3259 aaKnown RBP-0.19□□□□□ -2.44
CCDC66-219ENST00000484441 KNTC1P50748 2209 aa-0.19□□□□□ -2.44
CCDC66-219ENST00000484441 KIAA0100Q14667 2235 aaKnown RBP-0.19□□□□□ -2.44
CCDC66-219ENST00000484441 UNC13CQ8NB66 2214 aa-0.19□□□□□ -2.44
CCDC66-219ENST00000484441 A0A0J9YY10 115 aa-0.19□□□□□ -2.44
CCDC66-219ENST00000484441 A0A1B0GX78 115 aa-0.19□□□□□ -2.44
CCDC66-219ENST00000484441 HSBP1L1C9JCN9 74 aa-0.19□□□□□ -2.44
CCDC66-219ENST00000484441 ZNF25P17030 456 aaPredicted RBP-0.19□□□□□ -2.44
CCDC66-219ENST00000484441 EFNA4P52798 201 aa-0.19□□□□□ -2.44
CCDC66-219ENST00000484441 IFITM2Q01629 132 aa-0.19□□□□□ -2.44
CCDC66-219ENST00000484441 AADACL3Q5VUY0 350 aa-0.19□□□□□ -2.44
CCDC66-219ENST00000484441 SOSTDC1Q6X4U4 206 aa-0.19□□□□□ -2.44
CCDC66-219ENST00000484441 LCA10Q71F78 164 aa-0.19□□□□□ -2.44
CCDC66-219ENST00000484441 COMMD7Q86VX2 200 aa-0.19□□□□□ -2.44
CCDC66-219ENST00000484441 BORCS5Q969J3 196 aa-0.19□□□□□ -2.44
CCDC66-219ENST00000484441 DIRAS2Q96HU8 199 aa-0.19□□□□□ -2.44
CCDC66-219ENST00000484441 CNBD2Q96M20 576 aa-0.19□□□□□ -2.44
CCDC66-219ENST00000484441 SCGB3A1Q96QR1 104 aa-0.19□□□□□ -2.44
CCDC66-219ENST00000484441 MAP1LC3AQ9H492 121 aa-0.19□□□□□ -2.44
CCDC66-219ENST00000484441 DMDP11532 3685 aa-0.19□□□□□ -2.44
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms