RNA–Protein interactions for RNA: ENST00000477446.5

EPHB4-204, Transcript of EPH receptor B4, humanhuman

TSL 1 (best)

Gene EPHB4, Length 1,551 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-204ENST00000477446 ZFP92A6NM28 416 aa13.28□□□□□ -0.28
EPHB4-204ENST00000477446 LINC01548A6NM66 108 aa13.28□□□□□ -0.28
EPHB4-204ENST00000477446 B4DEV8 164 aa13.28□□□□□ -0.28
EPHB4-204ENST00000477446 CA2P00918 260 aa13.28□□□□□ -0.28
EPHB4-204ENST00000477446 PNRC1Q12796 327 aaPredicted RBP13.28□□□□□ -0.28
EPHB4-204ENST00000477446 TEPPQ6URK8 271 aa13.28□□□□□ -0.28
EPHB4-204ENST00000477446 TMEM170AQ8WVE7 144 aa13.28□□□□□ -0.28
EPHB4-204ENST00000477446 RAB24Q969Q5 203 aa13.28□□□□□ -0.28
EPHB4-204ENST00000477446 LSM4Q9Y4Z0 139 aaKnown RBP13.28□□□□□ -0.28
EPHB4-204ENST00000477446 A0A087WWC5 75 aa13.28□□□□□ -0.28
EPHB4-204ENST00000477446 IGHV7-81A0A0B4J1V7 117 aa13.28□□□□□ -0.28
EPHB4-204ENST00000477446 H3BQ15 152 aa13.28□□□□□ -0.28
EPHB4-204ENST00000477446 IGHG2P01859 326 aa13.28□□□□□ -0.28
EPHB4-204ENST00000477446 CDC34P49427 236 aaPredicted RBP13.28□□□□□ -0.28
EPHB4-204ENST00000477446 FGF8P55075 233 aaPredicted RBP13.28□□□□□ -0.28
EPHB4-204ENST00000477446 BSXQ3C1V8 233 aa13.28□□□□□ -0.28
EPHB4-204ENST00000477446 FAM122CQ6P4D5 195 aa13.28□□□□□ -0.28
EPHB4-204ENST00000477446 SSX7Q7RTT5 188 aa13.28□□□□□ -0.28
EPHB4-204ENST00000477446 MRPL41Q8IXM3 137 aaKnown RBP13.28□□□□□ -0.28
EPHB4-204ENST00000477446 CYB561D1Q8N8Q1 229 aa13.28□□□□□ -0.28
EPHB4-204ENST00000477446 OR4F5Q8NH21 305 aa13.28□□□□□ -0.28
EPHB4-204ENST00000477446 OR2T6Q8NHC8 308 aa13.28□□□□□ -0.28
EPHB4-204ENST00000477446 LINC01006Q8NI28 216 aa13.28□□□□□ -0.28
EPHB4-204ENST00000477446 TMEM158Q8WZ71 300 aa13.28□□□□□ -0.28
EPHB4-204ENST00000477446 C19orf24Q9BVV8 132 aa13.28□□□□□ -0.28
EPHB4-204ENST00000477446 HINT2Q9BX68 163 aa13.28□□□□□ -0.28
EPHB4-204ENST00000477446 NDUFA4L2Q9NRX3 87 aa13.28□□□□□ -0.28
EPHB4-204ENST00000477446 PUS1Q9Y606 427 aaKnown RBP eCLIP13.28□□□□□ -0.28
EPHB4-204ENST00000477446 A0A1W2PPV4 95 aa13.27□□□□□ -0.29
EPHB4-204ENST00000477446 RPL29P47914 159 aaKnown RBP13.27□□□□□ -0.29
EPHB4-204ENST00000477446 CX3CL1P78423 397 aa13.27□□□□□ -0.29
EPHB4-204ENST00000477446 FLI1Q01543 452 aaPredicted RBP13.27□□□□□ -0.29
EPHB4-204ENST00000477446 PRSS8Q16651 343 aa13.27□□□□□ -0.29
EPHB4-204ENST00000477446 TMEM95Q3KNT9 176 aa13.27□□□□□ -0.29
EPHB4-204ENST00000477446 ARSJQ5FYB0 599 aaPredicted RBP13.27□□□□□ -0.29
EPHB4-204ENST00000477446 CACNG8Q8WXS5 425 aa13.27□□□□□ -0.29
EPHB4-204ENST00000477446 ZNF430Q9H8G1 570 aaPredicted RBP13.27□□□□□ -0.29
EPHB4-204ENST00000477446 SERTAD4Q9NUC0 356 aa13.27□□□□□ -0.29
EPHB4-204ENST00000477446 TNCP24821 2201 aa13.27□□□□□ -0.29
EPHB4-204ENST00000477446 TMEM89A2RUT3 159 aa13.26□□□□□ -0.29
EPHB4-204ENST00000477446 COLCA2A8K830 154 aa13.26□□□□□ -0.29
EPHB4-204ENST00000477446 TMEM250H0YL14 139 aa13.26□□□□□ -0.29
EPHB4-204ENST00000477446 GPX4P36969 197 aaPredicted RBP13.26□□□□□ -0.29
EPHB4-204ENST00000477446 SUB1P53999 127 aaKnown RBP eCLIP13.26□□□□□ -0.299e-7■■■□□ 17.7
EPHB4-204ENST00000477446 RNF212Q495C1 297 aa13.26□□□□□ -0.29
EPHB4-204ENST00000477446 ZNF562Q6V9R5 426 aa13.26□□□□□ -0.29
EPHB4-204ENST00000477446 MGST2Q99735 147 aa13.26□□□□□ -0.29
EPHB4-204ENST00000477446 TXNDC17Q9BRA2 123 aa13.26□□□□□ -0.29
EPHB4-204ENST00000477446 GGTLC1Q9BX51 225 aa13.26□□□□□ -0.29
EPHB4-204ENST00000477446 SLC25A22Q9H936 323 aa13.26□□□□□ -0.29
EPHB4-204ENST00000477446 MT-ND4LP03901 98 aa13.25□□□□□ -0.29
EPHB4-204ENST00000477446 FOLR2P14207 255 aa13.25□□□□□ -0.29
EPHB4-204ENST00000477446 GNB1P62873 340 aa13.25□□□□□ -0.29
EPHB4-204ENST00000477446 SSBP2P81877 361 aaPredicted RBP13.25□□□□□ -0.29
EPHB4-204ENST00000477446 MEF2BQ02080 365 aaPredicted RBP13.25□□□□□ -0.29
EPHB4-204ENST00000477446 AKIRIN2Q53H80 203 aa13.25□□□□□ -0.29
EPHB4-204ENST00000477446 TMEM144Q7Z5S9 345 aa13.25□□□□□ -0.29
EPHB4-204ENST00000477446 PXMP4Q9Y6I8 212 aa13.25□□□□□ -0.29
EPHB4-204ENST00000477446 CLPSL1A2RUU4 121 aa13.24□□□□□ -0.29
EPHB4-204ENST00000477446 MAS1LP35410 378 aa13.24□□□□□ -0.29
EPHB4-204ENST00000477446 NDPQ00604 133 aa13.24□□□□□ -0.29
EPHB4-204ENST00000477446 FOXL1Q12952 345 aa13.24□□□□□ -0.29
EPHB4-204ENST00000477446 TNXAQ16473 311 aa13.24□□□□□ -0.29
EPHB4-204ENST00000477446 FAM90A2PQ658T7 463 aa13.24□□□□□ -0.29
EPHB4-204ENST00000477446 MMD2Q8IY49 270 aa13.24□□□□□ -0.29
EPHB4-204ENST00000477446 LINC00527Q9UJ94 153 aa13.24□□□□□ -0.29
EPHB4-204ENST00000477446 PRELID1Q9Y255 219 aa13.24□□□□□ -0.29
EPHB4-204ENST00000477446 CXorf65A6NEN9 183 aa13.24□□□□□ -0.29
EPHB4-204ENST00000477446 ATP6V0E1O15342 81 aa13.24□□□□□ -0.29
EPHB4-204ENST00000477446 CNIH1O95406 144 aa13.24□□□□□ -0.29
EPHB4-204ENST00000477446 RNASE2P10153 161 aaKnown RBP13.24□□□□□ -0.29
EPHB4-204ENST00000477446 CEBPGP53567 150 aa13.24□□□□□ -0.29
EPHB4-204ENST00000477446 FXYD3Q14802 87 aa13.24□□□□□ -0.29
EPHB4-204ENST00000477446 RNASEH2CQ8TDP1 164 aaKnown RBP13.24□□□□□ -0.29
EPHB4-204ENST00000477446 NOL4LQ96MY1 436 aaPredicted RBP13.24□□□□□ -0.29
EPHB4-204ENST00000477446 MLXQ9UH92 298 aa13.24□□□□□ -0.29
EPHB4-204ENST00000477446 RNF114Q9Y508 228 aa13.24□□□□□ -0.29
EPHB4-204ENST00000477446 A0A1B0GUS0 222 aa13.23□□□□□ -0.29
EPHB4-204ENST00000477446 AP4M1O00189 453 aa13.23□□□□□ -0.29
EPHB4-204ENST00000477446 YIF1AO95070 293 aa13.23□□□□□ -0.29
EPHB4-204ENST00000477446 EGR2P11161 476 aaPredicted RBP13.23□□□□□ -0.29
EPHB4-204ENST00000477446 B2MP61769 119 aa13.23□□□□□ -0.29
EPHB4-204ENST00000477446 SLC35E1Q96K37 410 aa13.23□□□□□ -0.29
EPHB4-204ENST00000477446 FAM103A1Q9BTL3 118 aaKnown RBP13.23□□□□□ -0.29
EPHB4-204ENST00000477446 C20orf24Q9BUV8 137 aa13.23□□□□□ -0.29
EPHB4-204ENST00000477446 ACTL6BO94805 426 aa13.22□□□□□ -0.29
EPHB4-204ENST00000477446 CXorf1O96002 111 aa13.22□□□□□ -0.29
EPHB4-204ENST00000477446 MT-CO2P00403 227 aa13.22□□□□□ -0.29
EPHB4-204ENST00000477446 IGF1P05019 195 aa13.22□□□□□ -0.29
EPHB4-204ENST00000477446 MYOD1P15172 320 aa13.22□□□□□ -0.29
EPHB4-204ENST00000477446 COMPP49747 757 aaPredicted RBP13.22□□□□□ -0.29
EPHB4-204ENST00000477446 PROK1P58294 105 aa13.22□□□□□ -0.29
EPHB4-204ENST00000477446 RHOBP62745 196 aa13.22□□□□□ -0.29
EPHB4-204ENST00000477446 CD69Q07108 199 aa13.22□□□□□ -0.29
EPHB4-204ENST00000477446 ABHD5Q8WTS1 349 aa13.22□□□□□ -0.29
EPHB4-204ENST00000477446 ARPC1AQ92747 370 aa13.22□□□□□ -0.29
EPHB4-204ENST00000477446 WNT10AQ9GZT5 417 aa13.22□□□□□ -0.29
EPHB4-204ENST00000477446 TMEM242Q9NWH2 141 aa13.22□□□□□ -0.29
EPHB4-204ENST00000477446 TET2Q6N021 2002 aaPredicted RBP13.22□□□□□ -0.29
EPHB4-204ENST00000477446 STAG3L2P0CL84 134 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms