RNA–Protein interactions for RNA: ENST00000475482.5

CPSF3-203, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

TSL 4

Gene CPSF3, Length 871 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-203ENST00000475482 ATP6V0E1O15342 81 aa12.11□□□□□ -0.47
CPSF3-203ENST00000475482 REG1AP05451 166 aa12.11□□□□□ -0.47
CPSF3-203ENST00000475482 AREGP15514 252 aa12.11□□□□□ -0.47
CPSF3-203ENST00000475482 CTRB1P17538 263 aa12.11□□□□□ -0.47
CPSF3-203ENST00000475482 OPRK1P41145 380 aa12.11□□□□□ -0.47
CPSF3-203ENST00000475482 CD69Q07108 199 aa12.11□□□□□ -0.47
CPSF3-203ENST00000475482 PVRIGQ6DKI7 326 aa12.11□□□□□ -0.47
CPSF3-203ENST00000475482 CTRB2Q6GPI1 263 aa12.11□□□□□ -0.47
CPSF3-203ENST00000475482 TTC9CQ8N5M4 171 aa12.11□□□□□ -0.47
CPSF3-203ENST00000475482 MRAPQ8TCY5 172 aa12.11□□□□□ -0.47
CPSF3-203ENST00000475482 TMEM170AQ8WVE7 144 aa12.11□□□□□ -0.47
CPSF3-203ENST00000475482 TMED6Q8WW62 240 aa12.11□□□□□ -0.47
CPSF3-203ENST00000475482 PSMG3Q9BT73 122 aaPredicted RBP12.11□□□□□ -0.47
CPSF3-203ENST00000475482 MCRIP2Q9BUT9 160 aaKnown RBP12.11□□□□□ -0.47
CPSF3-203ENST00000475482 GPR61Q9BZJ8 451 aa12.11□□□□□ -0.47
CPSF3-203ENST00000475482 PARP11Q9NR21 331 aa12.11□□□□□ -0.47
CPSF3-203ENST00000475482 THYN1Q9P016 225 aa12.11□□□□□ -0.47
CPSF3-203ENST00000475482 TIMM9Q9Y5J7 89 aa12.11□□□□□ -0.47
CPSF3-203ENST00000475482 UMAD1C9J7I0 102 aa12.1□□□□□ -0.47
CPSF3-203ENST00000475482 G3V318 75 aa12.1□□□□□ -0.47
CPSF3-203ENST00000475482 CRYGCP07315 174 aa12.1□□□□□ -0.47
CPSF3-203ENST00000475482 HIST1H1BP16401 226 aaKnown RBP12.1□□□□□ -0.47
CPSF3-203ENST00000475482 FGF7P21781 194 aa12.1□□□□□ -0.47
CPSF3-203ENST00000475482 ATP6V0CP27449 155 aa12.1□□□□□ -0.47
CPSF3-203ENST00000475482 SERF2P84101 59 aa12.1□□□□□ -0.47
CPSF3-203ENST00000475482 NDPQ00604 133 aa12.1□□□□□ -0.47
CPSF3-203ENST00000475482 AKR1C1Q04828 323 aa12.1□□□□□ -0.47
CPSF3-203ENST00000475482 FHL3Q13643 280 aa12.1□□□□□ -0.47
CPSF3-203ENST00000475482 NDUFA5Q16718 116 aa12.1□□□□□ -0.47
CPSF3-203ENST00000475482 OR2G3Q8NGZ4 309 aa12.1□□□□□ -0.47
CPSF3-203ENST00000475482 KLK15Q9H2R5 256 aa12.1□□□□□ -0.47
CPSF3-203ENST00000475482 WDR83OSQ9Y284 106 aa12.1□□□□□ -0.47
CPSF3-203ENST00000475482 FBXO7Q9Y3I1 522 aa12.1□□□□□ -0.47
CPSF3-203ENST00000475482 K7EIL1 84 aa12.09□□□□□ -0.47
CPSF3-203ENST00000475482 EGR2P11161 476 aaPredicted RBP12.09□□□□□ -0.47
CPSF3-203ENST00000475482 RUNX1Q01196 453 aa12.09□□□□□ -0.47
CPSF3-203ENST00000475482 AKIRIN2Q53H80 203 aa12.09□□□□□ -0.47
CPSF3-203ENST00000475482 TEPPQ6URK8 271 aa12.09□□□□□ -0.47
CPSF3-203ENST00000475482 BTNL8Q6UX41 500 aa12.09□□□□□ -0.47
CPSF3-203ENST00000475482 SLC16A13Q7RTY0 426 aa12.09□□□□□ -0.47
CPSF3-203ENST00000475482 TMEM144Q7Z5S9 345 aa12.09□□□□□ -0.47
CPSF3-203ENST00000475482 C4orf3Q8WVX3 66 aa12.09□□□□□ -0.47
CPSF3-203ENST00000475482 MISP3Q96FF7 219 aa12.09□□□□□ -0.47
CPSF3-203ENST00000475482 UBE2E2Q96LR5 201 aa12.09□□□□□ -0.47
CPSF3-203ENST00000475482 DUX3Q96PT4 197 aa12.09□□□□□ -0.47
CPSF3-203ENST00000475482 FAM103A1Q9BTL3 118 aaKnown RBP12.09□□□□□ -0.47
CPSF3-203ENST00000475482 TRAV41A0A0B4J266 112 aa12.08□□□□□ -0.48
CPSF3-203ENST00000475482 APELAP0DMC3 54 aa12.08□□□□□ -0.48
CPSF3-203ENST00000475482 SULT1A2P50226 295 aa12.08□□□□□ -0.48
CPSF3-203ENST00000475482 DEFB136Q30KP8 78 aa12.08□□□□□ -0.48
CPSF3-203ENST00000475482 CLLU1Q5K131 121 aa12.08□□□□□ -0.48
CPSF3-203ENST00000475482 AKR1C8PQ5T2L2 129 aa12.08□□□□□ -0.48
CPSF3-203ENST00000475482 UNQ5815/PRO19632Q6UWF5 114 aa12.08□□□□□ -0.48
CPSF3-203ENST00000475482 ZNF491Q8N8L2 437 aa12.08□□□□□ -0.48
CPSF3-203ENST00000475482 LFNGQ8NES3 379 aa12.08□□□□□ -0.48
CPSF3-203ENST00000475482 SAT2Q96F10 170 aaPredicted RBP12.08□□□□□ -0.48
CPSF3-203ENST00000475482 DNAH9Q9NYC9 4486 aa12.07□□□□□ -0.48
CPSF3-203ENST00000475482 WI2-2373I1.2A0A1W2PRP0 233 aa12.07□□□□□ -0.48
CPSF3-203ENST00000475482 I3L521 148 aa12.07□□□□□ -0.48
CPSF3-203ENST00000475482 MBP02144 154 aa12.07□□□□□ -0.48
CPSF3-203ENST00000475482 HOXD3P31249 432 aaPredicted RBP12.07□□□□□ -0.48
CPSF3-203ENST00000475482 BLOC1S1P78537 153 aa12.07□□□□□ -0.48
CPSF3-203ENST00000475482 DPPA3Q6W0C5 159 aa12.07□□□□□ -0.48
CPSF3-203ENST00000475482 NPCDR1Q9BY65 106 aa12.07□□□□□ -0.48
CPSF3-203ENST00000475482 SORL1Q92673 2214 aa12.06□□□□□ -0.48
CPSF3-203ENST00000475482 SCGB2A1O75556 95 aa12.06□□□□□ -0.48
CPSF3-203ENST00000475482 PRH1P02810 166 aa12.06□□□□□ -0.48
CPSF3-203ENST00000475482 RAB9AP51151 201 aa12.06□□□□□ -0.48
CPSF3-203ENST00000475482 GAMTQ14353 236 aa12.06□□□□□ -0.48
CPSF3-203ENST00000475482 ECSCRQ19T08 205 aa12.06□□□□□ -0.48
CPSF3-203ENST00000475482 SH3BGRL3Q9H299 93 aa12.06□□□□□ -0.48
CPSF3-203ENST00000475482 GNB4Q9HAV0 340 aa12.06□□□□□ -0.48
CPSF3-203ENST00000475482 ZNF705EA8MWA4 302 aaPredicted RBP12.05□□□□□ -0.48
CPSF3-203ENST00000475482 CAMLGP49069 296 aa12.05□□□□□ -0.48
CPSF3-203ENST00000475482 FAM74A1Q5RGS3 127 aa12.05□□□□□ -0.48
CPSF3-203ENST00000475482 ASPHD1Q5U4P2 390 aa12.05□□□□□ -0.48
CPSF3-203ENST00000475482 TMEM182Q6ZP80 229 aaPredicted RBP12.05□□□□□ -0.48
CPSF3-203ENST00000475482 OR11H1Q8NG94 326 aa12.05□□□□□ -0.48
CPSF3-203ENST00000475482 RSG1Q9BU20 258 aa12.05□□□□□ -0.48
CPSF3-203ENST00000475482 LSM4Q9Y4Z0 139 aaKnown RBP12.05□□□□□ -0.48
CPSF3-203ENST00000475482 COL7A1Q02388 2944 aa12.05□□□□□ -0.48
CPSF3-203ENST00000475482 IGLV11-55A0A075B6I3 123 aa12.04□□□□□ -0.48
CPSF3-203ENST00000475482 TEX46H3BTG2 121 aa12.04□□□□□ -0.48
CPSF3-203ENST00000475482 MT-CO2P00403 227 aa12.04□□□□□ -0.48
CPSF3-203ENST00000475482 FABP1P07148 127 aa12.04□□□□□ -0.48
CPSF3-203ENST00000475482 MFAP2P55001 183 aa12.04□□□□□ -0.48
CPSF3-203ENST00000475482 KLK9Q2XQG4 91 aa12.04□□□□□ -0.48
CPSF3-203ENST00000475482 TMEM116Q8NCL8 245 aa12.04□□□□□ -0.48
CPSF3-203ENST00000475482 OR5T1Q8NG75 326 aa12.04□□□□□ -0.48
CPSF3-203ENST00000475482 DPF1Q92782 380 aa12.04□□□□□ -0.48
CPSF3-203ENST00000475482 ACY3Q96HD9 319 aa12.04□□□□□ -0.48
CPSF3-203ENST00000475482 FNDC4Q9H6D8 234 aaPredicted RBP12.04□□□□□ -0.48
CPSF3-203ENST00000475482 KLK9Q9UKQ9 250 aa12.04□□□□□ -0.48
CPSF3-203ENST00000475482 H3BUA1 57 aa12.03□□□□□ -0.48
CPSF3-203ENST00000475482 AGPAT2O15120 278 aa12.03□□□□□ -0.48
CPSF3-203ENST00000475482 NMBP08949 121 aa12.03□□□□□ -0.48
CPSF3-203ENST00000475482 RPL29P47914 159 aaKnown RBP12.03□□□□□ -0.48
CPSF3-203ENST00000475482 NPBWR1P48145 328 aa12.03□□□□□ -0.48
CPSF3-203ENST00000475482 RAB2AP61019 212 aa12.03□□□□□ -0.48
CPSF3-203ENST00000475482 SELENOTP62341 195 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms