RNA–Protein interactions for RNA: ENST00000474240.1

ECHDC1-213, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 482 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-213ENST00000474240 OR13D1Q8NGV5 346 aa0.59□□□□□ -2.31
ECHDC1-213ENST00000474240 CT55Q8WUE5 264 aa0.59□□□□□ -2.31
ECHDC1-213ENST00000474240 C2orf50Q96LR7 162 aa0.59□□□□□ -2.31
ECHDC1-213ENST00000474240 CCDC42Q96M95 316 aa0.59□□□□□ -2.31
ECHDC1-213ENST00000474240 PPP1R2P1Q96PQ5 205 aa0.59□□□□□ -2.31
ECHDC1-213ENST00000474240 TMEM14CQ9P0S9 112 aa0.59□□□□□ -2.31
ECHDC1-213ENST00000474240 PKIGQ9Y2B9 76 aa0.59□□□□□ -2.31
ECHDC1-213ENST00000474240 NOSIPQ9Y314 301 aaKnown RBP0.59□□□□□ -2.31
ECHDC1-213ENST00000474240 V9GYY5 206 aaPredicted RBP0.59□□□□□ -2.31
ECHDC1-213ENST00000474240 TAF1LQ8IZX4 1826 aa0.59□□□□□ -2.32
ECHDC1-213ENST00000474240 EXPH5Q8NEV8 1989 aa0.58□□□□□ -2.32
ECHDC1-213ENST00000474240 TRAV26-2A0A0B4J265 109 aa0.58□□□□□ -2.32
ECHDC1-213ENST00000474240 CLDN24A6NM45 220 aa0.58□□□□□ -2.32
ECHDC1-213ENST00000474240 CYB5BO43169 146 aa0.58□□□□□ -2.32
ECHDC1-213ENST00000474240 LYZL6O75951 148 aa0.58□□□□□ -2.32
ECHDC1-213ENST00000474240 RPP14O95059 124 aaKnown RBP0.58□□□□□ -2.32
ECHDC1-213ENST00000474240 SPA17Q15506 151 aa0.58□□□□□ -2.32
ECHDC1-213ENST00000474240 TSNQ15631 228 aaKnown RBP0.58□□□□□ -2.32
ECHDC1-213ENST00000474240 ESRGQ1W209 222 aa0.58□□□□□ -2.32
ECHDC1-213ENST00000474240 ALKAL1Q6UXT8 129 aa0.58□□□□□ -2.32
ECHDC1-213ENST00000474240 CLECL1Q8IZS7 167 aa0.58□□□□□ -2.32
ECHDC1-213ENST00000474240 CLDN22Q8N7P3 220 aa0.58□□□□□ -2.32
ECHDC1-213ENST00000474240 GDPD1Q8N9F7 314 aa0.58□□□□□ -2.32
ECHDC1-213ENST00000474240 ST6GALNAC3Q8NDV1 305 aa0.58□□□□□ -2.32
ECHDC1-213ENST00000474240 ZNF431Q8TF32 576 aaPredicted RBP0.58□□□□□ -2.32
ECHDC1-213ENST00000474240 LINC00467Q9BRT7 94 aa0.58□□□□□ -2.32
ECHDC1-213ENST00000474240 DCSTAMPQ9H295 470 aa0.58□□□□□ -2.32
ECHDC1-213ENST00000474240 TP73-AS1Q9UF72 201 aa0.58□□□□□ -2.32
ECHDC1-213ENST00000474240 MUC5BQ9HC84 5762 aaPredicted RBP0.58□□□□□ -2.32
ECHDC1-213ENST00000474240 NCOA1Q15788 1441 aa0.57□□□□□ -2.32
ECHDC1-213ENST00000474240 TNS3Q68CZ2 1445 aa0.57□□□□□ -2.32
ECHDC1-213ENST00000474240 COL4A5P29400 1685 aa0.57□□□□□ -2.32
ECHDC1-213ENST00000474240 TGIF2-C20orf24A0A0A6YYL0 155 aa0.57□□□□□ -2.32
ECHDC1-213ENST00000474240 C1orf196B1AJZ1 125 aa0.57□□□□□ -2.32
ECHDC1-213ENST00000474240 BUB1B-PAK6H3BSN5 160 aa0.57□□□□□ -2.32
ECHDC1-213ENST00000474240 CHP2O43745 196 aa0.57□□□□□ -2.32
ECHDC1-213ENST00000474240 TTRP02766 147 aa0.57□□□□□ -2.32
ECHDC1-213ENST00000474240 EIF5AP63241 154 aaKnown RBP0.57□□□□□ -2.32
ECHDC1-213ENST00000474240 SRSF6Q13247 344 aaKnown RBP0.57□□□□□ -2.32
ECHDC1-213ENST00000474240 SPATA8Q6RVD6 105 aa0.57□□□□□ -2.32
ECHDC1-213ENST00000474240 LCA10Q71F78 164 aa0.57□□□□□ -2.32
ECHDC1-213ENST00000474240 TMEM86BQ8N661 226 aa0.57□□□□□ -2.32
ECHDC1-213ENST00000474240 OTUD6BQ8N6M0 293 aa0.57□□□□□ -2.32
ECHDC1-213ENST00000474240 PLPP5Q8NEB5 264 aa0.57□□□□□ -2.32
ECHDC1-213ENST00000474240 C8orf76Q96K31 380 aa0.57□□□□□ -2.32
ECHDC1-213ENST00000474240 TVP23BQ9NYZ1 205 aa0.57□□□□□ -2.32
ECHDC1-213ENST00000474240 FBXO5Q9UKT4 447 aa0.57□□□□□ -2.32
ECHDC1-213ENST00000474240 UTP11Q9Y3A2 253 aaKnown RBP0.57□□□□□ -2.32
ECHDC1-213ENST00000474240 FBN2P35556 2912 aa0.57□□□□□ -2.32
ECHDC1-213ENST00000474240 LAMA4Q16363 1823 aa0.57□□□□□ -2.32
ECHDC1-213ENST00000474240 hCG_1818297A0A087WSY0 165 aa0.56□□□□□ -2.32
ECHDC1-213ENST00000474240 IGLV3-32A0A0A0MS00 114 aa0.56□□□□□ -2.32
ECHDC1-213ENST00000474240 TRAV3A0A0B4J244 114 aa0.56□□□□□ -2.32
ECHDC1-213ENST00000474240 A8MT66 165 aa0.56□□□□□ -2.32
ECHDC1-213ENST00000474240 ZNF25P17030 456 aaPredicted RBP0.56□□□□□ -2.32
ECHDC1-213ENST00000474240 SRP14P37108 136 aaKnown RBP0.56□□□□□ -2.32
ECHDC1-213ENST00000474240 RPS20P60866 119 aaKnown RBP0.56□□□□□ -2.32
ECHDC1-213ENST00000474240 PSG9Q00887 426 aa0.56□□□□□ -2.32
ECHDC1-213ENST00000474240 MYL5Q02045 173 aa0.56□□□□□ -2.32
ECHDC1-213ENST00000474240 LINC01554Q52M75 96 aa0.56□□□□□ -2.32
ECHDC1-213ENST00000474240 OR8D4Q8NGM9 314 aa0.56□□□□□ -2.32
ECHDC1-213ENST00000474240 CANT1Q8WVQ1 401 aa0.56□□□□□ -2.32
ECHDC1-213ENST00000474240 BTF3L4Q96K17 158 aa0.56□□□□□ -2.32
ECHDC1-213ENST00000474240 YPEL2Q96QA6 119 aa0.56□□□□□ -2.32
ECHDC1-213ENST00000474240 TMEM70Q9BUB7 260 aa0.56□□□□□ -2.32
ECHDC1-213ENST00000474240 MRPL27Q9P0M9 148 aaKnown RBP0.56□□□□□ -2.32
ECHDC1-213ENST00000474240 ADGRB2O60241 1585 aa0.56□□□□□ -2.32
ECHDC1-213ENST00000474240 MED1Q15648 1581 aaPredicted RBP0.56□□□□□ -2.32
ECHDC1-213ENST00000474240 DOCK5Q9H7D0 1870 aa0.56□□□□□ -2.32
ECHDC1-213ENST00000474240 RP1P56715 2156 aa0.56□□□□□ -2.32
ECHDC1-213ENST00000474240 WRNQ14191 1432 aaPredicted RBP eCLIP0.55□□□□□ -2.32
ECHDC1-213ENST00000474240 GPR98Q8WXG9 6306 aa0.55□□□□□ -2.32
ECHDC1-213ENST00000474240 TRGV10A0A0A0MS01 117 aa0.55□□□□□ -2.32
ECHDC1-213ENST00000474240 OR2T8A6NH00 312 aa0.55□□□□□ -2.32
ECHDC1-213ENST00000474240 OR2J2O76002 312 aa0.55□□□□□ -2.32
ECHDC1-213ENST00000474240 SERPINE1P05121 402 aa0.55□□□□□ -2.32
ECHDC1-213ENST00000474240 C8GP07360 202 aa0.55□□□□□ -2.32
ECHDC1-213ENST00000474240 DEFA1P59665 94 aa0.55□□□□□ -2.32
ECHDC1-213ENST00000474240 EDDM3AQ14507 147 aa0.55□□□□□ -2.32
ECHDC1-213ENST00000474240 IMPG1Q17R60 797 aa0.55□□□□□ -2.32
ECHDC1-213ENST00000474240 LINC00322Q6ZN03 302 aaPredicted RBP0.55□□□□□ -2.32
ECHDC1-213ENST00000474240 SBSPONQ8IVN8 264 aa0.55□□□□□ -2.32
ECHDC1-213ENST00000474240 SLC30A7Q8NEW0 376 aa0.55□□□□□ -2.32
ECHDC1-213ENST00000474240 PPP1R14BQ96C90 147 aa0.55□□□□□ -2.32
ECHDC1-213ENST00000474240 TP53RKQ96S44 253 aa0.55□□□□□ -2.32
ECHDC1-213ENST00000474240 GPER1Q99527 375 aa0.55□□□□□ -2.32
ECHDC1-213ENST00000474240 BCL2L10Q9HD36 194 aa0.55□□□□□ -2.32
ECHDC1-213ENST00000474240 NIT2Q9NQR4 276 aa0.55□□□□□ -2.32
ECHDC1-213ENST00000474240 ORMDL1Q9P0S3 153 aa0.55□□□□□ -2.32
ECHDC1-213ENST00000474240 TNFSF18Q9UNG2 199 aa0.55□□□□□ -2.32
ECHDC1-213ENST00000474240 EML6Q6ZMW3 1958 aa0.55□□□□□ -2.32
ECHDC1-213ENST00000474240 ZNF469Q96JG9 3925 aaPredicted RBP0.55□□□□□ -2.32
ECHDC1-213ENST00000474240 NEO1Q92859 1461 aa0.54□□□□□ -2.32
ECHDC1-213ENST00000474240 hADV38S2A0JD32 116 aa0.54□□□□□ -2.32
ECHDC1-213ENST00000474240 PDE6DO43924 150 aa0.54□□□□□ -2.32
ECHDC1-213ENST00000474240 DHFRP00374 187 aa0.54□□□□□ -2.32
ECHDC1-213ENST00000474240 SMIM17P0DL12 118 aa0.54□□□□□ -2.32
ECHDC1-213ENST00000474240 HIST1H3AP68431 136 aa0.54□□□□□ -2.32
ECHDC1-213ENST00000474240 H3F3AP84243 136 aa0.54□□□□□ -2.32
ECHDC1-213ENST00000474240 IAH1Q2TAA2 248 aaPredicted RBP0.54□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms