RNA–Protein interactions for RNA: ENST00000470167.1

COL3A1-205, Transcript of collagen type III alpha 1 chain, humanhuman

TSL 2

Gene COL3A1, Length 628 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-205ENST00000470167 TMEM99Q8N816 258 aa4.1□□□□□ -1.75
COL3A1-205ENST00000470167 LRTM2Q8N967 370 aa4.1□□□□□ -1.75
COL3A1-205ENST00000470167 FAM19A4Q96LR4 140 aa4.1□□□□□ -1.75
COL3A1-205ENST00000470167 MCEEQ96PE7 176 aa4.1□□□□□ -1.75
COL3A1-205ENST00000470167 GFI1Q99684 422 aa4.1□□□□□ -1.75
COL3A1-205ENST00000470167 RTL8AQ9BWD3 113 aa4.1□□□□□ -1.75
COL3A1-205ENST00000470167 HES7Q9BYE0 225 aa4.1□□□□□ -1.75
COL3A1-205ENST00000470167 Q9H8V8 135 aa4.1□□□□□ -1.75
COL3A1-205ENST00000470167 TNRC6AQ8NDV7 1962 aaKnown RBP4.1□□□□□ -1.75
COL3A1-205ENST00000470167 KMT2BQ9UMN6 2715 aaPredicted RBP4.1□□□□□ -1.75
COL3A1-205ENST00000470167 TIAM2Q8IVF5 1701 aa4.09□□□□□ -1.75
COL3A1-205ENST00000470167 SCN1AP35498 2009 aa4.09□□□□□ -1.75
COL3A1-205ENST00000470167 TRBV19A0A075B6N1 114 aa4.09□□□□□ -1.75
COL3A1-205ENST00000470167 A6NIN4 97 aa4.09□□□□□ -1.75
COL3A1-205ENST00000470167 C2orf70A6NJV1 201 aa4.09□□□□□ -1.75
COL3A1-205ENST00000470167 SRRM4A7MD48 611 aaKnown RBP4.09□□□□□ -1.75
COL3A1-205ENST00000470167 C2CD4DB7Z1M9 353 aa4.09□□□□□ -1.75
COL3A1-205ENST00000470167 MRPS12O15235 138 aaKnown RBP4.09□□□□□ -1.75
COL3A1-205ENST00000470167 SPRY3O43610 288 aa4.09□□□□□ -1.75
COL3A1-205ENST00000470167 DEDDO75618 318 aa4.09□□□□□ -1.75
COL3A1-205ENST00000470167 PLAUP00749 431 aa4.09□□□□□ -1.75
COL3A1-205ENST00000470167 APCSP02743 223 aa4.09□□□□□ -1.75
COL3A1-205ENST00000470167 PRH1P02810 166 aa4.09□□□□□ -1.75
COL3A1-205ENST00000470167 FGF1P05230 155 aa4.09□□□□□ -1.75
COL3A1-205ENST00000470167 IGKV5-2P06315 115 aa4.09□□□□□ -1.75
COL3A1-205ENST00000470167 PYYP10082 97 aa4.09□□□□□ -1.75
COL3A1-205ENST00000470167 CLDN17P56750 224 aa4.09□□□□□ -1.75
COL3A1-205ENST00000470167 FBXW4P57775 412 aa4.09□□□□□ -1.75
COL3A1-205ENST00000470167 RPL23P62829 140 aaKnown RBP4.09□□□□□ -1.75
COL3A1-205ENST00000470167 SP4Q02446 784 aa4.09□□□□□ -1.75
COL3A1-205ENST00000470167 PSMG4Q5JS54 123 aa4.09□□□□□ -1.75
COL3A1-205ENST00000470167 PARM1Q6UWI2 310 aa4.09□□□□□ -1.75
COL3A1-205ENST00000470167 TRAPPC6BQ86SZ2 158 aa4.09□□□□□ -1.75
COL3A1-205ENST00000470167 TMEM150AQ86TG1 271 aa4.09□□□□□ -1.75
COL3A1-205ENST00000470167 POM121L12Q8N7R1 296 aa4.09□□□□□ -1.75
COL3A1-205ENST00000470167 DCAF4L2Q8NA75 395 aa4.09□□□□□ -1.75
COL3A1-205ENST00000470167 SPATA3Q8NHX4 192 aa4.09□□□□□ -1.75
COL3A1-205ENST00000470167 LMX1AQ8TE12 382 aa4.09□□□□□ -1.75
COL3A1-205ENST00000470167 DNAJA3Q96EY1 480 aa4.09□□□□□ -1.75
COL3A1-205ENST00000470167 C2orf50Q96LR7 162 aa4.09□□□□□ -1.75
COL3A1-205ENST00000470167 GNB1LQ9BYB4 327 aa4.09□□□□□ -1.75
COL3A1-205ENST00000470167 PRRG4Q9BZD6 226 aa4.09□□□□□ -1.75
COL3A1-205ENST00000470167 ZNF331Q9NQX6 463 aaPredicted RBP4.09□□□□□ -1.75
COL3A1-205ENST00000470167 TNFRSF19Q9NS68 423 aa4.09□□□□□ -1.75
COL3A1-205ENST00000470167 RNF181Q9P0P0 153 aa4.09□□□□□ -1.75
COL3A1-205ENST00000470167 WDR83OSQ9Y284 106 aa4.09□□□□□ -1.75
COL3A1-205ENST00000470167 HES2Q9Y543 173 aa4.09□□□□□ -1.75
COL3A1-205ENST00000470167 BDP1A6H8Y1 2624 aa4.09□□□□□ -1.75
COL3A1-205ENST00000470167 LRRC37A3O60309 1634 aa4.09□□□□□ -1.76
COL3A1-205ENST00000470167 TNS1Q9HBL0 1735 aaKnown RBP4.09□□□□□ -1.76
COL3A1-205ENST00000470167 SMIM26A0A096LP01 95 aa4.08□□□□□ -1.76
COL3A1-205ENST00000470167 TRBV7-6A0A0J9YX20 115 aa4.08□□□□□ -1.76
COL3A1-205ENST00000470167 A8MT66 165 aa4.08□□□□□ -1.76
COL3A1-205ENST00000470167 K7EMT4 169 aa4.08□□□□□ -1.76
COL3A1-205ENST00000470167 SSSCA1O60232 199 aa4.08□□□□□ -1.76
COL3A1-205ENST00000470167 CPSF4O95639 269 aaKnown RBP4.08□□□□□ -1.76
COL3A1-205ENST00000470167 GP1BBP13224 206 aa4.08□□□□□ -1.76
COL3A1-205ENST00000470167 COL8A2P25067 703 aa4.08□□□□□ -1.76
COL3A1-205ENST00000470167 FCGR2CP31995 323 aa4.08□□□□□ -1.76
COL3A1-205ENST00000470167 APOC4P55056 127 aa4.08□□□□□ -1.76
COL3A1-205ENST00000470167 CCL20P78556 96 aa4.08□□□□□ -1.76
COL3A1-205ENST00000470167 QRFPP83859 136 aa4.08□□□□□ -1.76
COL3A1-205ENST00000470167 CDK5R1Q15078 307 aa4.08□□□□□ -1.76
COL3A1-205ENST00000470167 BEAN1Q3B7T3 259 aa4.08□□□□□ -1.76
COL3A1-205ENST00000470167 SP6Q3SY56 376 aa4.08□□□□□ -1.76
COL3A1-205ENST00000470167 SYT14P1Q58G82 188 aa4.08□□□□□ -1.76
COL3A1-205ENST00000470167 Q6ZRM9 215 aa4.08□□□□□ -1.76
COL3A1-205ENST00000470167 KCPQ6ZWJ8 1503 aa4.08□□□□□ -1.76
COL3A1-205ENST00000470167 Q71RC1 249 aaPredicted RBP4.08□□□□□ -1.76
COL3A1-205ENST00000470167 MRGPREQ86SM8 312 aa4.08□□□□□ -1.76
COL3A1-205ENST00000470167 MSRB3Q8IXL7 192 aa4.08□□□□□ -1.76
COL3A1-205ENST00000470167 C15orf53Q8NAA6 179 aa4.08□□□□□ -1.76
COL3A1-205ENST00000470167 FAM213BQ8TBF2 198 aa4.08□□□□□ -1.76
COL3A1-205ENST00000470167 SSMEM1Q8WWF3 244 aa4.08□□□□□ -1.76
COL3A1-205ENST00000470167 BORCS8Q96FH0 119 aa4.08□□□□□ -1.76
COL3A1-205ENST00000470167 IGF2BP2-AS1Q96M15 143 aa4.08□□□□□ -1.76
COL3A1-205ENST00000470167 APOOQ9BUR5 198 aa4.08□□□□□ -1.76
COL3A1-205ENST00000470167 GLIPR2Q9H4G4 154 aa4.08□□□□□ -1.76
COL3A1-205ENST00000470167 GNB4Q9HAV0 340 aa4.08□□□□□ -1.76
COL3A1-205ENST00000470167 OTORQ9NRC9 128 aa4.08□□□□□ -1.76
COL3A1-205ENST00000470167 HIGD1BQ9P298 99 aa4.08□□□□□ -1.76
COL3A1-205ENST00000470167 RPUSD1Q9UJJ7 312 aaKnown RBP4.08□□□□□ -1.76
COL3A1-205ENST00000470167 BRCA1P38398 1863 aaKnown RBP4.07□□□□□ -1.76
COL3A1-205ENST00000470167 PLXNA4Q9HCM2 1894 aa4.07□□□□□ -1.76
COL3A1-205ENST00000470167 KIF26AQ9ULI4 1882 aaPredicted RBP4.07□□□□□ -1.76
COL3A1-205ENST00000470167 COL1A1P02452 1464 aaPredicted RBP4.07□□□□□ -1.76
COL3A1-205ENST00000470167 IGLL5B9A064 214 aa4.07□□□□□ -1.76
COL3A1-205ENST00000470167 VCYO14598 125 aa4.07□□□□□ -1.76
COL3A1-205ENST00000470167 ZNF134P52741 427 aa4.07□□□□□ -1.76
COL3A1-205ENST00000470167 DAZ2Q13117 558 aaKnown RBP4.07□□□□□ -1.76
COL3A1-205ENST00000470167 ZC2HC1BQ5TFG8 222 aa4.07□□□□□ -1.76
COL3A1-205ENST00000470167 HES3Q5TGS1 186 aa4.07□□□□□ -1.76
COL3A1-205ENST00000470167 EBLN2Q6P2I7 272 aa4.07□□□□□ -1.76
COL3A1-205ENST00000470167 PQLC2Q6ZP29 291 aa4.07□□□□□ -1.76
COL3A1-205ENST00000470167 DAZ4Q86SG3 579 aaKnown RBP4.07□□□□□ -1.76
COL3A1-205ENST00000470167 CEND1Q8N111 149 aa4.07□□□□□ -1.76
COL3A1-205ENST00000470167 ZNF563Q8TA94 476 aa4.07□□□□□ -1.76
COL3A1-205ENST00000470167 TSKUQ8WUA8 353 aa4.07□□□□□ -1.76
COL3A1-205ENST00000470167 KLK6Q92876 244 aa4.07□□□□□ -1.76
COL3A1-205ENST00000470167 NABP1Q96AH0 204 aa4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms