RNA–Protein interactions for RNA: ENST00000470094.1

BRCA2-202, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 5

Gene BRCA2, Length 842 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-202ENST00000470094 MYH7BA7E2Y1 1941 aa1.5□□□□□ -2.17
BRCA2-202ENST00000470094 ZNF705FA8MVS1 300 aaPredicted RBP1.5□□□□□ -2.17
BRCA2-202ENST00000470094 H3BRN7 92 aa1.5□□□□□ -2.17
BRCA2-202ENST00000470094 PPBPP02775 128 aa1.5□□□□□ -2.17
BRCA2-202ENST00000470094 SMIM17P0DL12 118 aa1.5□□□□□ -2.17
BRCA2-202ENST00000470094 P0DMU3 169 aa1.5□□□□□ -2.17
BRCA2-202ENST00000470094 FAM231AP0DMU4 169 aa1.5□□□□□ -2.17
BRCA2-202ENST00000470094 FAM231CP0DMU5 169 aa1.5□□□□□ -2.17
BRCA2-202ENST00000470094 NFYAP23511 347 aaPredicted RBP1.5□□□□□ -2.17
BRCA2-202ENST00000470094 FXYD2P54710 66 aa1.5□□□□□ -2.17
BRCA2-202ENST00000470094 YPEL3P61236 119 aaPredicted RBP1.5□□□□□ -2.17
BRCA2-202ENST00000470094 LINC01554Q52M75 96 aa1.5□□□□□ -2.17
BRCA2-202ENST00000470094 BRMS1LQ5PSV4 323 aa1.5□□□□□ -2.17
BRCA2-202ENST00000470094 LYRM7Q5U5X0 104 aa1.5□□□□□ -2.17
BRCA2-202ENST00000470094 EXOC3-AS1Q8N2X6 119 aa1.5□□□□□ -2.17
BRCA2-202ENST00000470094 OR10K1Q8NGX5 313 aa1.5□□□□□ -2.17
BRCA2-202ENST00000470094 OR10J5Q8NHC4 309 aa1.5□□□□□ -2.17
BRCA2-202ENST00000470094 PFN4Q8NHR9 129 aa1.5□□□□□ -2.17
BRCA2-202ENST00000470094 DOHHQ9BU89 302 aa1.5□□□□□ -2.17
BRCA2-202ENST00000470094 PBDC1Q9BVG4 233 aa1.5□□□□□ -2.17
BRCA2-202ENST00000470094 FAM107BQ9H098 131 aa1.5□□□□□ -2.17
BRCA2-202ENST00000470094 MED29Q9NX70 200 aa1.5□□□□□ -2.17
BRCA2-202ENST00000470094 GINS2Q9Y248 185 aa1.5□□□□□ -2.17
BRCA2-202ENST00000470094 MYH11P35749 1972 aa1.5□□□□□ -2.17
BRCA2-202ENST00000470094 MED1Q15648 1581 aaPredicted RBP1.5□□□□□ -2.17
BRCA2-202ENST00000470094 KDM5BQ9UGL1 1544 aa1.5□□□□□ -2.17
BRCA2-202ENST00000470094 NCAPD3P42695 1498 aa1.5□□□□□ -2.17
BRCA2-202ENST00000470094 CCNB3Q8WWL7 1395 aa1.49□□□□□ -2.17
BRCA2-202ENST00000470094 GREB1Q4ZG55 1949 aa1.49□□□□□ -2.17
BRCA2-202ENST00000470094 IGLV3-9A0A075B6K5 115 aa1.49□□□□□ -2.17
BRCA2-202ENST00000470094 UQCRHLA0A096LP55 91 aa1.49□□□□□ -2.17
BRCA2-202ENST00000470094 A0A0D9SEW6 157 aa1.49□□□□□ -2.17
BRCA2-202ENST00000470094 MAP1LC3B2A6NCE7 125 aa1.49□□□□□ -2.17
BRCA2-202ENST00000470094 TRAPPC2LH3BP13 241 aa1.49□□□□□ -2.17
BRCA2-202ENST00000470094 J3QQQ9 107 aa1.49□□□□□ -2.17
BRCA2-202ENST00000470094 DHFRP00374 187 aa1.49□□□□□ -2.17
BRCA2-202ENST00000470094 CSN2P05814 226 aa1.49□□□□□ -2.17
BRCA2-202ENST00000470094 UQCRHP07919 91 aa1.49□□□□□ -2.17
BRCA2-202ENST00000470094 CASP1P29466 404 aa1.49□□□□□ -2.17
BRCA2-202ENST00000470094 SRIP30626 198 aa1.49□□□□□ -2.17
BRCA2-202ENST00000470094 TMEM258P61165 79 aa1.49□□□□□ -2.17
BRCA2-202ENST00000470094 RPL26P61254 145 aaKnown RBP1.49□□□□□ -2.17
BRCA2-202ENST00000470094 RELAQ04206 551 aa1.49□□□□□ -2.17
BRCA2-202ENST00000470094 RRN3P1Q2M238 152 aa1.49□□□□□ -2.17
BRCA2-202ENST00000470094 MIR17HGQ75NE6 70 aa1.49□□□□□ -2.17
BRCA2-202ENST00000470094 LRRC28Q86X40 367 aaPredicted RBP1.49□□□□□ -2.17
BRCA2-202ENST00000470094 BPIFA4PQ86YQ2 179 aa1.49□□□□□ -2.17
BRCA2-202ENST00000470094 CLVS1Q8IUQ0 354 aaPredicted RBP1.49□□□□□ -2.17
BRCA2-202ENST00000470094 TMEM35BQ8NCS4 154 aa1.49□□□□□ -2.17
BRCA2-202ENST00000470094 SLAMF6Q96DU3 332 aa1.49□□□□□ -2.17
BRCA2-202ENST00000470094 TXNDC17Q9BRA2 123 aa1.49□□□□□ -2.17
BRCA2-202ENST00000470094 TIMM21Q9BVV7 248 aa1.49□□□□□ -2.17
BRCA2-202ENST00000470094 RTL8AQ9BWD3 113 aa1.49□□□□□ -2.17
BRCA2-202ENST00000470094 MAP1LC3BQ9GZQ8 125 aa1.49□□□□□ -2.17
BRCA2-202ENST00000470094 LRTM1Q9HBL6 345 aa1.49□□□□□ -2.17
BRCA2-202ENST00000470094 SLC39A9Q9NUM3 307 aa1.49□□□□□ -2.17
BRCA2-202ENST00000470094 RPL26L1Q9UNX3 145 aaKnown RBP1.49□□□□□ -2.17
BRCA2-202ENST00000470094 LTBP2Q14767 1821 aa1.49□□□□□ -2.17
BRCA2-202ENST00000470094 TAF1LQ8IZX4 1826 aa1.49□□□□□ -2.17
BRCA2-202ENST00000470094 STRCQ7RTU9 1775 aa1.49□□□□□ -2.17
BRCA2-202ENST00000470094 WDR7Q9Y4E6 1490 aa1.49□□□□□ -2.17
BRCA2-202ENST00000470094 RTEL1-TNFRSF6BF6WH68 1400 aa1.49□□□□□ -2.17
BRCA2-202ENST00000470094 CNTLNQ9NXG0 1405 aa1.49□□□□□ -2.17
BRCA2-202ENST00000470094 ADAMTS7Q9UKP4 1686 aa1.48□□□□□ -2.17
BRCA2-202ENST00000470094 SMARCA4P51532 1647 aa1.48□□□□□ -2.17
BRCA2-202ENST00000470094 MUC6Q6W4X9 2439 aa1.48□□□□□ -2.17
BRCA2-202ENST00000470094 CPAMD8Q8IZJ3 1885 aa1.48□□□□□ -2.17
BRCA2-202ENST00000470094 IGKV1-9A0A0C4DH69 117 aa1.48□□□□□ -2.17
BRCA2-202ENST00000470094 TRBV10-2A0A0K0K1G8 114 aa1.48□□□□□ -2.17
BRCA2-202ENST00000470094 A0A1B0GVG6 124 aa1.48□□□□□ -2.17
BRCA2-202ENST00000470094 A0A1W2PRE2 83 aa1.48□□□□□ -2.17
BRCA2-202ENST00000470094 MEIS3P1A6NDR6 274 aa1.48□□□□□ -2.17
BRCA2-202ENST00000470094 OR51F1A6NGY5 319 aa1.48□□□□□ -2.17
BRCA2-202ENST00000470094 TMEM212A6NML5 194 aa1.48□□□□□ -2.17
BRCA2-202ENST00000470094 CLDN25C9JDP6 229 aa1.48□□□□□ -2.17
BRCA2-202ENST00000470094 TSTD3H0UI37 97 aa1.48□□□□□ -2.17
BRCA2-202ENST00000470094 PFDN1O60925 122 aa1.48□□□□□ -2.17
BRCA2-202ENST00000470094 IFNGP01579 166 aa1.48□□□□□ -2.17
BRCA2-202ENST00000470094 APOA2P02652 100 aa1.48□□□□□ -2.17
BRCA2-202ENST00000470094 S100A4P26447 101 aaKnown RBP1.48□□□□□ -2.17
BRCA2-202ENST00000470094 GLRXP35754 106 aa1.48□□□□□ -2.17
BRCA2-202ENST00000470094 SUPT4H1P63272 117 aaKnown RBP1.48□□□□□ -2.17
BRCA2-202ENST00000470094 DCUN1D2Q6PH85 259 aa1.48□□□□□ -2.17
BRCA2-202ENST00000470094 TRAPPC6BQ86SZ2 158 aa1.48□□□□□ -2.17
BRCA2-202ENST00000470094 DYDC1Q8WWB3 177 aa1.48□□□□□ -2.17
BRCA2-202ENST00000470094 C11orf40Q8WZ69 217 aa1.48□□□□□ -2.17
BRCA2-202ENST00000470094 ADAT3Q96EY9 351 aaPredicted RBP1.48□□□□□ -2.17
BRCA2-202ENST00000470094 SCGB3A1Q96QR1 104 aa1.48□□□□□ -2.17
BRCA2-202ENST00000470094 CAMSAP2Q08AD1 1489 aa1.48□□□□□ -2.17
BRCA2-202ENST00000470094 SCAF11Q99590 1463 aaKnown RBP1.48□□□□□ -2.17
BRCA2-202ENST00000470094 PIK3C2AO00443 1686 aa1.48□□□□□ -2.17
BRCA2-202ENST00000470094 RIMS1Q86UR5 1692 aaKnown RBP1.48□□□□□ -2.17
BRCA2-202ENST00000470094 CD109Q6YHK3 1445 aa1.48□□□□□ -2.17
BRCA2-202ENST00000470094 SCAPERQ9BY12 1400 aa1.48□□□□□ -2.17
BRCA2-202ENST00000470094 OBSL1O75147 1896 aa1.48□□□□□ -2.17
BRCA2-202ENST00000470094 NUP210LQ5VU65 1888 aa1.48□□□□□ -2.17
BRCA2-202ENST00000470094 TRPM1Q7Z4N2 1603 aa1.48□□□□□ -2.17
BRCA2-202ENST00000470094 ARHGEF28Q8N1W1 1705 aaKnown RBP1.47□□□□□ -2.17
BRCA2-202ENST00000470094 DUXBA0A1W2PPF3 345 aa1.47□□□□□ -2.17
BRCA2-202ENST00000470094 ZNF860A6NHJ4 632 aa1.47□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 84 ms