RNA–Protein interactions for RNA: ENST00000469529.6

TRAF4-208, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 788 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-208ENST00000469529 SLC35B1P78383 322 aa9.93□□□□□ -0.82
TRAF4-208ENST00000469529 AKR1C1Q04828 323 aa9.93□□□□□ -0.82
TRAF4-208ENST00000469529 ATP5G2Q06055 141 aa9.93□□□□□ -0.82
TRAF4-208ENST00000469529 FOXE3Q13461 319 aa9.93□□□□□ -0.82
TRAF4-208ENST00000469529 TEX38Q6PEX7 206 aa9.93□□□□□ -0.82
TRAF4-208ENST00000469529 ALKAL2Q6UX46 152 aa9.93□□□□□ -0.82
TRAF4-208ENST00000469529 Q6ZSV7 163 aa9.93□□□□□ -0.82
TRAF4-208ENST00000469529 SPATA3Q8NHX4 192 aa9.93□□□□□ -0.82
TRAF4-208ENST00000469529 ZNF502Q8TBZ5 544 aa9.93□□□□□ -0.82
TRAF4-208ENST00000469529 MYOZ3Q8TDC0 251 aa9.93□□□□□ -0.82
TRAF4-208ENST00000469529 WIPF2Q8TF74 440 aaPredicted RBP9.93□□□□□ -0.82
TRAF4-208ENST00000469529 TMEM158Q8WZ71 300 aa9.93□□□□□ -0.82
TRAF4-208ENST00000469529 NOL4LQ96MY1 436 aaPredicted RBP9.93□□□□□ -0.82
TRAF4-208ENST00000469529 GGTLC1Q9BX51 225 aa9.93□□□□□ -0.82
TRAF4-208ENST00000469529 C21orf62Q9NYP8 219 aa9.93□□□□□ -0.82
TRAF4-208ENST00000469529 ATRQ13535 2644 aa9.93□□□□□ -0.82
TRAF4-208ENST00000469529 SMCO3A2RU48 225 aa9.92□□□□□ -0.82
TRAF4-208ENST00000469529 TCF21O43680 179 aa9.92□□□□□ -0.82
TRAF4-208ENST00000469529 OR2J3O76001 311 aa9.92□□□□□ -0.82
TRAF4-208ENST00000469529 CRYBA1P05813 215 aa9.92□□□□□ -0.82
TRAF4-208ENST00000469529 FABP1P07148 127 aa9.92□□□□□ -0.82
TRAF4-208ENST00000469529 IGLC1P0CG04 106 aa9.92□□□□□ -0.82
TRAF4-208ENST00000469529 PLP1P60201 277 aa9.92□□□□□ -0.82
TRAF4-208ENST00000469529 RUNX1Q01196 453 aa9.92□□□□□ -0.82
TRAF4-208ENST00000469529 KIAA0141Q14154 515 aaPredicted RBP9.92□□□□□ -0.82
TRAF4-208ENST00000469529 C15orf32Q32M92 178 aa9.92□□□□□ -0.82
TRAF4-208ENST00000469529 CLLU1Q5K131 121 aa9.92□□□□□ -0.82
TRAF4-208ENST00000469529 PXDC1Q5TGL8 231 aa9.92□□□□□ -0.82
TRAF4-208ENST00000469529 ACY3Q96HD9 319 aa9.92□□□□□ -0.82
TRAF4-208ENST00000469529 RSG1Q9BU20 258 aa9.92□□□□□ -0.82
TRAF4-208ENST00000469529 SH3BGRL3Q9H299 93 aa9.92□□□□□ -0.82
TRAF4-208ENST00000469529 SCGB2A1O75556 95 aa9.91□□□□□ -0.82
TRAF4-208ENST00000469529 TSPAN15O95858 294 aa9.91□□□□□ -0.82
TRAF4-208ENST00000469529 IGKV1-17P01599 117 aa9.91□□□□□ -0.82
TRAF4-208ENST00000469529 OR10J1P30954 320 aa9.91□□□□□ -0.82
TRAF4-208ENST00000469529 BLOC1S1P78537 153 aa9.91□□□□□ -0.82
TRAF4-208ENST00000469529 ACSM6Q6P461 480 aa9.91□□□□□ -0.82
TRAF4-208ENST00000469529 SPSB3Q6PJ21 355 aa9.91□□□□□ -0.82
TRAF4-208ENST00000469529 CYP2G1PQ6ZSU1 146 aa9.91□□□□□ -0.82
TRAF4-208ENST00000469529 LYPD6BQ8NI32 183 aa9.91□□□□□ -0.82
TRAF4-208ENST00000469529 EEF1AKMT3Q96AZ1 226 aa9.91□□□□□ -0.82
TRAF4-208ENST00000469529 DUX5Q96PT3 197 aa9.91□□□□□ -0.82
TRAF4-208ENST00000469529 ZNF355PQ9NSJ1 428 aa9.91□□□□□ -0.82
TRAF4-208ENST00000469529 SLC39A9Q9NUM3 307 aa9.91□□□□□ -0.82
TRAF4-208ENST00000469529 LINC00527Q9UJ94 153 aa9.91□□□□□ -0.82
TRAF4-208ENST00000469529 TRAV1-1A0A0B4J248 108 aa9.9□□□□□ -0.82
TRAF4-208ENST00000469529 PSMB11A5LHX3 300 aa9.9□□□□□ -0.82
TRAF4-208ENST00000469529 MFSD2BA6NFX1 497 aa9.9□□□□□ -0.82
TRAF4-208ENST00000469529 ZFP92A6NM28 416 aa9.9□□□□□ -0.82
TRAF4-208ENST00000469529 TRGV3P03979 118 aa9.9□□□□□ -0.82
TRAF4-208ENST00000469529 CTSGP08311 255 aa9.9□□□□□ -0.82
TRAF4-208ENST00000469529 NMBP08949 121 aa9.9□□□□□ -0.82
TRAF4-208ENST00000469529 M6PRP20645 277 aa9.9□□□□□ -0.82
TRAF4-208ENST00000469529 RAB14P61106 215 aa9.9□□□□□ -0.82
TRAF4-208ENST00000469529 ZNF343Q6P1L6 599 aa9.9□□□□□ -0.82
TRAF4-208ENST00000469529 MBD3L1Q8WWY6 194 aa9.9□□□□□ -0.82
TRAF4-208ENST00000469529 KLK15Q9H2R5 256 aa9.9□□□□□ -0.82
TRAF4-208ENST00000469529 RPRMQ9NS64 109 aa9.9□□□□□ -0.82
TRAF4-208ENST00000469529 MED9Q9NWA0 146 aa9.9□□□□□ -0.82
TRAF4-208ENST00000469529 PXMP4Q9Y6I8 212 aa9.9□□□□□ -0.82
TRAF4-208ENST00000469529 COL6A5A8TX70 2615 aa9.9□□□□□ -0.82
TRAF4-208ENST00000469529 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.89□□□□□ -0.83
TRAF4-208ENST00000469529 SEC14L6B5MCN3 397 aa9.89□□□□□ -0.83
TRAF4-208ENST00000469529 YIF1AO95070 293 aa9.89□□□□□ -0.83
TRAF4-208ENST00000469529 B2MP61769 119 aa9.89□□□□□ -0.83
TRAF4-208ENST00000469529 PMS2P11Q13670 270 aa9.89□□□□□ -0.83
TRAF4-208ENST00000469529 ACOT6Q3I5F7 207 aaPredicted RBP9.89□□□□□ -0.83
TRAF4-208ENST00000469529 TMEM41BQ5BJD5 291 aa9.89□□□□□ -0.83
TRAF4-208ENST00000469529 AKR1C8PQ5T2L2 129 aa9.89□□□□□ -0.83
TRAF4-208ENST00000469529 Q6ZRG5 221 aa9.89□□□□□ -0.83
TRAF4-208ENST00000469529 STPG3Q8N7X2 389 aa9.89□□□□□ -0.83
TRAF4-208ENST00000469529 GATAD1Q8WUU5 269 aa9.89□□□□□ -0.83
TRAF4-208ENST00000469529 UBE2E2Q96LR5 201 aa9.89□□□□□ -0.83
TRAF4-208ENST00000469529 MS4A10Q96PG2 267 aa9.89□□□□□ -0.83
TRAF4-208ENST00000469529 RFNGQ9Y644 331 aa9.89□□□□□ -0.83
TRAF4-208ENST00000469529 ELOA3CA0A087WX78 387 aaPredicted RBP9.88□□□□□ -0.83
TRAF4-208ENST00000469529 A0A1B0GUS0 222 aa9.88□□□□□ -0.83
TRAF4-208ENST00000469529 GNG7O60262 68 aa9.88□□□□□ -0.83
TRAF4-208ENST00000469529 OR2C1O95371 312 aa9.88□□□□□ -0.83
TRAF4-208ENST00000469529 TOMM40O96008 361 aa9.88□□□□□ -0.83
TRAF4-208ENST00000469529 IGHV3-48P01763 117 aa9.88□□□□□ -0.83
TRAF4-208ENST00000469529 CLEC3BP05452 202 aa9.88□□□□□ -0.83
TRAF4-208ENST00000469529 RD3LP0DJH9 198 aa9.88□□□□□ -0.83
TRAF4-208ENST00000469529 PF4V1P10720 104 aa9.88□□□□□ -0.83
TRAF4-208ENST00000469529 ADMP35318 185 aa9.88□□□□□ -0.83
TRAF4-208ENST00000469529 SRSF2Q01130 221 aaKnown RBP9.88□□□□□ -0.83
TRAF4-208ENST00000469529 ZNF90Q03938 601 aa9.88□□□□□ -0.83
TRAF4-208ENST00000469529 TMEM95Q3KNT9 176 aa9.88□□□□□ -0.83
TRAF4-208ENST00000469529 KRTAP24-1Q3LI83 254 aa9.88□□□□□ -0.83
TRAF4-208ENST00000469529 FFAR4Q5NUL3 377 aa9.88□□□□□ -0.83
TRAF4-208ENST00000469529 MIC13Q5XKP0 118 aa9.88□□□□□ -0.83
TRAF4-208ENST00000469529 TMEM182Q6ZP80 229 aaPredicted RBP9.88□□□□□ -0.83
TRAF4-208ENST00000469529 RPP25LQ8N5L8 163 aaKnown RBP9.88□□□□□ -0.83
TRAF4-208ENST00000469529 ZNF491Q8N8L2 437 aa9.88□□□□□ -0.83
TRAF4-208ENST00000469529 BPIFCQ8NFQ6 507 aa9.88□□□□□ -0.83
TRAF4-208ENST00000469529 LINC01006Q8NI28 216 aa9.88□□□□□ -0.83
TRAF4-208ENST00000469529 CCDC140Q96MF4 163 aa9.88□□□□□ -0.83
TRAF4-208ENST00000469529 RNF2Q99496 336 aa9.88□□□□□ -0.83
TRAF4-208ENST00000469529 DNAJC4Q9NNZ3 241 aa9.88□□□□□ -0.83
TRAF4-208ENST00000469529 IGHV3-21A0A0B4J1V1 117 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms