RNA–Protein interactions for RNA: ENST00000469129.1

SMC1A-205, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-205ENST00000469129 FAM110DQ8TAY7 271 aaPredicted RBP7.4□□□□□ -1.22
SMC1A-205ENST00000469129 RBM14Q96PK6 669 aaKnown RBP7.4□□□□□ -1.22
SMC1A-205ENST00000469129 UHRF2Q96PU4 802 aa7.4□□□□□ -1.22
SMC1A-205ENST00000469129 OR4F4Q96R69 305 aa7.4□□□□□ -1.22
SMC1A-205ENST00000469129 TMPRSS5Q9H3S3 457 aa7.4□□□□□ -1.22
SMC1A-205ENST00000469129 SMCO4Q9NRQ5 59 aa7.4□□□□□ -1.22
SMC1A-205ENST00000469129 PRELID1Q9Y255 219 aa7.4□□□□□ -1.22
SMC1A-205ENST00000469129 PUS1Q9Y606 427 aaKnown RBP eCLIP7.4□□□□□ -1.22
SMC1A-205ENST00000469129 ABCA12Q86UK0 2595 aa7.4□□□□□ -1.23
SMC1A-205ENST00000469129 FBN2P35556 2912 aa7.39□□□□□ -1.23
SMC1A-205ENST00000469129 IGLV11-55A0A075B6I3 123 aa7.39□□□□□ -1.23
SMC1A-205ENST00000469129 IGHV7-81A0A0B4J1V7 117 aa7.39□□□□□ -1.23
SMC1A-205ENST00000469129 PSMB11A5LHX3 300 aa7.39□□□□□ -1.23
SMC1A-205ENST00000469129 ZNF727A8MUV8 499 aa7.39□□□□□ -1.23
SMC1A-205ENST00000469129 H3BQ15 152 aa7.39□□□□□ -1.23
SMC1A-205ENST00000469129 M0QZK8 103 aa7.39□□□□□ -1.23
SMC1A-205ENST00000469129 OR7C2O60412 319 aa7.39□□□□□ -1.23
SMC1A-205ENST00000469129 PAX6P26367 422 aa7.39□□□□□ -1.23
SMC1A-205ENST00000469129 CD81P60033 236 aa7.39□□□□□ -1.23
SMC1A-205ENST00000469129 PLP1P60201 277 aa7.39□□□□□ -1.23
SMC1A-205ENST00000469129 MLANAQ16655 118 aa7.39□□□□□ -1.23
SMC1A-205ENST00000469129 FAM120AOSQ5T036 256 aa7.39□□□□□ -1.23
SMC1A-205ENST00000469129 CST9LP1Q5W188 147 aa7.39□□□□□ -1.23
SMC1A-205ENST00000469129 PRSS57Q6UWY2 283 aa7.39□□□□□ -1.23
SMC1A-205ENST00000469129 BRD3OSQ6XYD6 125 aa7.39□□□□□ -1.23
SMC1A-205ENST00000469129 MIR17HGQ75NE6 70 aa7.39□□□□□ -1.23
SMC1A-205ENST00000469129 STXBP6Q8NFX7 210 aa7.39□□□□□ -1.23
SMC1A-205ENST00000469129 TMEM190Q8WZ59 177 aa7.39□□□□□ -1.23
SMC1A-205ENST00000469129 SMIM7Q9BQ49 75 aa7.39□□□□□ -1.23
SMC1A-205ENST00000469129 FAM103A1Q9BTL3 118 aaKnown RBP7.39□□□□□ -1.23
SMC1A-205ENST00000469129 SEPSECSQ9HD40 501 aaKnown RBP7.39□□□□□ -1.23
SMC1A-205ENST00000469129 DNAJC4Q9NNZ3 241 aa7.39□□□□□ -1.23
SMC1A-205ENST00000469129 RPS10P5Q9NQ39 176 aa7.39□□□□□ -1.23
SMC1A-205ENST00000469129 NAT8Q9UHE5 227 aa7.39□□□□□ -1.23
SMC1A-205ENST00000469129 CSMD1Q96PZ7 3565 aa7.38□□□□□ -1.23
SMC1A-205ENST00000469129 IGHV3OR16-10A0A075B7F0 116 aa7.38□□□□□ -1.23
SMC1A-205ENST00000469129 A0A087WWC5 75 aa7.38□□□□□ -1.23
SMC1A-205ENST00000469129 A0A0U1RQK1 487 aa7.38□□□□□ -1.23
SMC1A-205ENST00000469129 C7orf77A4D0Y5 90 aa7.38□□□□□ -1.23
SMC1A-205ENST00000469129 FAM74A7A6NL05 159 aa7.38□□□□□ -1.23
SMC1A-205ENST00000469129 K7EIM0 57 aa7.38□□□□□ -1.23
SMC1A-205ENST00000469129 EIF3GO75821 320 aaKnown RBP eCLIP7.38□□□□□ -1.23
SMC1A-205ENST00000469129 IGLC1P0CG04 106 aa7.38□□□□□ -1.23
SMC1A-205ENST00000469129 IGHV4-38-2P0DP08 117 aa7.38□□□□□ -1.23
SMC1A-205ENST00000469129 GATA2P23769 480 aaPredicted RBP7.38□□□□□ -1.23
SMC1A-205ENST00000469129 S100A7P31151 101 aa7.38□□□□□ -1.23
SMC1A-205ENST00000469129 MFAP4P55083 255 aa7.38□□□□□ -1.23
SMC1A-205ENST00000469129 KRTAP10-9P60411 292 aa7.38□□□□□ -1.23
SMC1A-205ENST00000469129 UBE2G2P60604 165 aa7.38□□□□□ -1.23
SMC1A-205ENST00000469129 UBE2L3P68036 154 aaKnown RBP7.38□□□□□ -1.23
SMC1A-205ENST00000469129 NDPQ00604 133 aa7.38□□□□□ -1.23
SMC1A-205ENST00000469129 AKIRIN2Q53H80 203 aa7.38□□□□□ -1.23
SMC1A-205ENST00000469129 FBLN7Q53RD9 439 aa7.38□□□□□ -1.23
SMC1A-205ENST00000469129 ASPHD1Q5U4P2 390 aa7.38□□□□□ -1.23
SMC1A-205ENST00000469129 SPATA31B1PQ5VZV4 182 aa7.38□□□□□ -1.23
SMC1A-205ENST00000469129 UNQ5815/PRO19632Q6UWF5 114 aa7.38□□□□□ -1.23
SMC1A-205ENST00000469129 C5orf56Q8N8D9 126 aa7.38□□□□□ -1.23
SMC1A-205ENST00000469129 C15orf54Q8N8G6 183 aa7.38□□□□□ -1.23
SMC1A-205ENST00000469129 TXN2Q99757 166 aa7.38□□□□□ -1.23
SMC1A-205ENST00000469129 GAR1Q9NY12 217 aaKnown RBP7.38□□□□□ -1.23
SMC1A-205ENST00000469129 MRPL36Q9P0J6 103 aaKnown RBP7.38□□□□□ -1.23
SMC1A-205ENST00000469129 RNF24Q9Y225 148 aa7.38□□□□□ -1.23
SMC1A-205ENST00000469129 DMRT1Q9Y5R6 373 aa7.38□□□□□ -1.23
SMC1A-205ENST00000469129 CSMD2Q7Z408 3487 aa7.37□□□□□ -1.23
SMC1A-205ENST00000469129 APCP25054 2843 aa7.37□□□□□ -1.23
SMC1A-205ENST00000469129 PRRC2AP48634 2157 aaKnown RBP7.37□□□□□ -1.23
SMC1A-205ENST00000469129 TEX15Q9BXT5 2789 aa7.37□□□□□ -1.23
SMC1A-205ENST00000469129 A0A1W2PRE2 83 aa7.37□□□□□ -1.23
SMC1A-205ENST00000469129 ATP6V0E1O15342 81 aa7.37□□□□□ -1.23
SMC1A-205ENST00000469129 GNG7O60262 68 aa7.37□□□□□ -1.23
SMC1A-205ENST00000469129 HYPMO75409 117 aa7.37□□□□□ -1.23
SMC1A-205ENST00000469129 TOMM40O96008 361 aa7.37□□□□□ -1.23
SMC1A-205ENST00000469129 IGHV3-48P01763 117 aa7.37□□□□□ -1.23
SMC1A-205ENST00000469129 FCGR2BP31994 310 aaPredicted RBP7.37□□□□□ -1.23
SMC1A-205ENST00000469129 CRIP2P52943 208 aaPredicted RBP7.37□□□□□ -1.23
SMC1A-205ENST00000469129 ZNF90Q03938 601 aa7.37□□□□□ -1.23
SMC1A-205ENST00000469129 ECSCRQ19T08 205 aa7.37□□□□□ -1.23
SMC1A-205ENST00000469129 KLK9Q2XQG4 91 aa7.37□□□□□ -1.23
SMC1A-205ENST00000469129 C19orf35Q6ZS72 473 aa7.37□□□□□ -1.23
SMC1A-205ENST00000469129 CBLN2Q8IUK8 224 aa7.37□□□□□ -1.23
SMC1A-205ENST00000469129 TEX29Q8N6K0 151 aa7.37□□□□□ -1.23
SMC1A-205ENST00000469129 OR5AU1Q8NGC0 362 aa7.37□□□□□ -1.23
SMC1A-205ENST00000469129 OR1B1Q8NGR6 318 aa7.37□□□□□ -1.23
SMC1A-205ENST00000469129 VN1R17PQ8TDU5 208 aa7.37□□□□□ -1.23
SMC1A-205ENST00000469129 TMEM37Q8WXS4 190 aa7.37□□□□□ -1.23
SMC1A-205ENST00000469129 RPUSD4Q96CM3 377 aaKnown RBP7.37□□□□□ -1.23
SMC1A-205ENST00000469129 SSX3Q99909 188 aa7.37□□□□□ -1.23
SMC1A-205ENST00000469129 TCEAL7Q9BRU2 100 aa7.37□□□□□ -1.23
SMC1A-205ENST00000469129 C20orf24Q9BUV8 137 aa7.37□□□□□ -1.23
SMC1A-205ENST00000469129 TMUB1Q9BVT8 246 aa7.37□□□□□ -1.23
SMC1A-205ENST00000469129 PARLQ9H300 379 aa7.37□□□□□ -1.23
SMC1A-205ENST00000469129 TUBA4BQ9H853 241 aa7.37□□□□□ -1.23
SMC1A-205ENST00000469129 ZNF355PQ9NSJ1 428 aa7.37□□□□□ -1.23
SMC1A-205ENST00000469129 DOK5Q9P104 306 aa7.37□□□□□ -1.23
SMC1A-205ENST00000469129 KLK9Q9UKQ9 250 aa7.37□□□□□ -1.23
SMC1A-205ENST00000469129 HIGD1AQ9Y241 93 aa7.37□□□□□ -1.23
SMC1A-205ENST00000469129 TMA7Q9Y2S6 64 aaKnown RBP7.37□□□□□ -1.23
SMC1A-205ENST00000469129 IGHV3-21A0A0B4J1V1 117 aa7.36□□□□□ -1.23
SMC1A-205ENST00000469129 RNF223E7ERA6 249 aa7.36□□□□□ -1.23
SMC1A-205ENST00000469129 TSPAN4O14817 238 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 107.5 ms