RNA–Protein interactions for RNA: ENST00000467319.1

MSH5-212, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 688 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-212ENST00000467319 IZUMO1RA6ND01 250 aa8.34□□□□□ -1.07
MSH5-212ENST00000467319 C5orf51A6NDU8 294 aa8.34□□□□□ -1.07
MSH5-212ENST00000467319 PMS2P5A8MQ11 134 aa8.34□□□□□ -1.07
MSH5-212ENST00000467319 FAM25EA8MYX2 175 aa8.34□□□□□ -1.07
MSH5-212ENST00000467319 K7EPK0 472 aa8.34□□□□□ -1.07
MSH5-212ENST00000467319 SCGB1D2O95969 90 aa8.34□□□□□ -1.07
MSH5-212ENST00000467319 OR10J1P30954 320 aa8.34□□□□□ -1.07
MSH5-212ENST00000467319 H2BFSP57053 126 aa8.34□□□□□ -1.07
MSH5-212ENST00000467319 RAB11AP62491 216 aa8.34□□□□□ -1.07
MSH5-212ENST00000467319 RPP30P78346 268 aaKnown RBP8.34□□□□□ -1.07
MSH5-212ENST00000467319 GAMTQ14353 236 aa8.34□□□□□ -1.07
MSH5-212ENST00000467319 DEFB114Q30KQ6 69 aa8.34□□□□□ -1.07
MSH5-212ENST00000467319 TIGITQ495A1 244 aa8.34□□□□□ -1.07
MSH5-212ENST00000467319 CD300EQ496F6 205 aaPredicted RBP8.34□□□□□ -1.07
MSH5-212ENST00000467319 SPANXN5Q5MJ07 72 aa8.34□□□□□ -1.07
MSH5-212ENST00000467319 LCN12Q6JVE5 192 aa8.34□□□□□ -1.07
MSH5-212ENST00000467319 BTNL8Q6UX41 500 aa8.34□□□□□ -1.07
MSH5-212ENST00000467319 TOMM20LQ6UXN7 152 aa8.34□□□□□ -1.07
MSH5-212ENST00000467319 GSG1LQ6UXU4 331 aa8.34□□□□□ -1.07
MSH5-212ENST00000467319 NPIPB3Q92617 1050 aa8.34□□□□□ -1.07
MSH5-212ENST00000467319 ACY3Q96HD9 319 aa8.34□□□□□ -1.07
MSH5-212ENST00000467319 PRR25Q96S07 402 aa8.34□□□□□ -1.07
MSH5-212ENST00000467319 MRPL27Q9P0M9 148 aaKnown RBP8.34□□□□□ -1.07
MSH5-212ENST00000467319 GSKIPQ9P0R6 139 aa8.34□□□□□ -1.07
MSH5-212ENST00000467319 PUS1Q9Y606 427 aaKnown RBP eCLIP8.34□□□□□ -1.07
MSH5-212ENST00000467319 HUWE1Q7Z6Z7 4374 aaKnown RBP8.33□□□□□ -1.08
MSH5-212ENST00000467319 IGKV1OR2-108A0A075B7D4 117 aa8.33□□□□□ -1.08
MSH5-212ENST00000467319 GOSR2O14653 212 aa8.33□□□□□ -1.08
MSH5-212ENST00000467319 SCGB2A1O75556 95 aa8.33□□□□□ -1.08
MSH5-212ENST00000467319 GP9P14770 177 aa8.33□□□□□ -1.08
MSH5-212ENST00000467319 YPEL3P61236 119 aaPredicted RBP8.33□□□□□ -1.08
MSH5-212ENST00000467319 ACOT7LQ6ZUV0 252 aa8.33□□□□□ -1.08
MSH5-212ENST00000467319 TMEM61Q8N0U2 210 aa8.33□□□□□ -1.08
MSH5-212ENST00000467319 THAP8Q8NA92 274 aa8.33□□□□□ -1.08
MSH5-212ENST00000467319 DYNLRB2Q8TF09 96 aa8.33□□□□□ -1.08
MSH5-212ENST00000467319 SLC35E1Q96K37 410 aa8.33□□□□□ -1.08
MSH5-212ENST00000467319 C20orf24Q9BUV8 137 aa8.33□□□□□ -1.08
MSH5-212ENST00000467319 PSENENQ9NZ42 101 aa8.33□□□□□ -1.08
MSH5-212ENST00000467319 LSM4Q9Y4Z0 139 aaKnown RBP8.33□□□□□ -1.08
MSH5-212ENST00000467319 COL7A1Q02388 2944 aa8.32□□□□□ -1.08
MSH5-212ENST00000467319 IGHV7-4-1A0A0J9YVY3 117 aa8.32□□□□□ -1.08
MSH5-212ENST00000467319 CCNKO75909 580 aa8.32□□□□□ -1.08
MSH5-212ENST00000467319 TOMM40O96008 361 aa8.32□□□□□ -1.08
MSH5-212ENST00000467319 RAB32Q13637 225 aa8.32□□□□□ -1.08
MSH5-212ENST00000467319 RGS21Q2M5E4 152 aa8.32□□□□□ -1.08
MSH5-212ENST00000467319 MRAPQ8TCY5 172 aa8.32□□□□□ -1.08
MSH5-212ENST00000467319 GINS3Q9BRX5 216 aa8.32□□□□□ -1.08
MSH5-212ENST00000467319 NMES1Q9C002 83 aa8.32□□□□□ -1.08
MSH5-212ENST00000467319 SMPXQ9UHP9 88 aa8.32□□□□□ -1.08
MSH5-212ENST00000467319 ALG5Q9Y673 324 aa8.32□□□□□ -1.08
MSH5-212ENST00000467319 TRAV25A0A0B4J276 109 aa8.31□□□□□ -1.08
MSH5-212ENST00000467319 ZNF785A8K8V0 405 aa8.31□□□□□ -1.08
MSH5-212ENST00000467319 FNDC10F2Z333 226 aa8.31□□□□□ -1.08
MSH5-212ENST00000467319 ZNF207O43670 478 aaKnown RBP8.31□□□□□ -1.08
MSH5-212ENST00000467319 YIF1AO95070 293 aa8.31□□□□□ -1.08
MSH5-212ENST00000467319 SIX6O95475 246 aa8.31□□□□□ -1.08
MSH5-212ENST00000467319 METTL15P1P0C7V9 234 aa8.31□□□□□ -1.08
MSH5-212ENST00000467319 S100A10P60903 97 aa8.31□□□□□ -1.08
MSH5-212ENST00000467319 DLK1P80370 383 aa8.31□□□□□ -1.08
MSH5-212ENST00000467319 OXA1LQ15070 435 aa8.31□□□□□ -1.08
MSH5-212ENST00000467319 Q8N1Y9 231 aa8.31□□□□□ -1.08
MSH5-212ENST00000467319 WDR89Q96FK6 387 aaPredicted RBP8.31□□□□□ -1.08
MSH5-212ENST00000467319 TRGV9Q99603 122 aa8.31□□□□□ -1.08
MSH5-212ENST00000467319 VSIRQ9H7M9 311 aa8.31□□□□□ -1.08
MSH5-212ENST00000467319 LYRM2Q9NU23 88 aaPredicted RBP8.31□□□□□ -1.08
MSH5-212ENST00000467319 PAIP2BQ9ULR5 123 aaKnown RBP8.31□□□□□ -1.08
MSH5-212ENST00000467319 LSM5Q9Y4Y9 91 aaKnown RBP8.31□□□□□ -1.08
MSH5-212ENST00000467319 CHEK1O14757 476 aa8.3□□□□□ -1.08
MSH5-212ENST00000467319 SSNA1O43805 119 aa8.3□□□□□ -1.08
MSH5-212ENST00000467319 DEDDO75618 318 aa8.3□□□□□ -1.08
MSH5-212ENST00000467319 PSG1P11464 419 aa8.3□□□□□ -1.08
MSH5-212ENST00000467319 CRYBB3P26998 211 aa8.3□□□□□ -1.08
MSH5-212ENST00000467319 ZNF90Q03938 601 aa8.3□□□□□ -1.08
MSH5-212ENST00000467319 ARL16Q0P5N6 197 aa8.3□□□□□ -1.08
MSH5-212ENST00000467319 USF2Q15853 346 aaPredicted RBP8.3□□□□□ -1.08
MSH5-212ENST00000467319 FAM90A2PQ658T7 463 aa8.3□□□□□ -1.08
MSH5-212ENST00000467319 OR8G2PQ6IF36 304 aa8.3□□□□□ -1.08
MSH5-212ENST00000467319 RHPN1-AS1Q9BWJ2 59 aa8.3□□□□□ -1.08
MSH5-212ENST00000467319 MGAT4CQ9UBM8 478 aa8.3□□□□□ -1.08
MSH5-212ENST00000467319 U3KQE9 123 aa8.3□□□□□ -1.08
MSH5-212ENST00000467319 TRAV14DV4A0A0A6YYC5 116 aa8.29□□□□□ -1.08
MSH5-212ENST00000467319 IGSF23A1L1A6 192 aa8.29□□□□□ -1.08
MSH5-212ENST00000467319 ZFP92A6NM28 416 aa8.29□□□□□ -1.08
MSH5-212ENST00000467319 H0YIZ8 118 aa8.29□□□□□ -1.08
MSH5-212ENST00000467319 L7N2F9 121 aa8.29□□□□□ -1.08
MSH5-212ENST00000467319 TSPAN4O14817 238 aa8.29□□□□□ -1.08
MSH5-212ENST00000467319 APOHP02749 345 aaPredicted RBP8.29□□□□□ -1.08
MSH5-212ENST00000467319 RD3LP0DJH9 198 aa8.29□□□□□ -1.08
MSH5-212ENST00000467319 PVALBP20472 110 aaPredicted RBP8.29□□□□□ -1.08
MSH5-212ENST00000467319 VAMP2P63027 116 aa8.29□□□□□ -1.08
MSH5-212ENST00000467319 CYCSP99999 105 aaKnown RBP8.29□□□□□ -1.08
MSH5-212ENST00000467319 TMEM144Q7Z5S9 345 aa8.29□□□□□ -1.08
MSH5-212ENST00000467319 Q8WTZ3 238 aa8.29□□□□□ -1.08
MSH5-212ENST00000467319 ST8SIA2Q92186 375 aa8.29□□□□□ -1.08
MSH5-212ENST00000467319 METTL26Q96S19 204 aa8.29□□□□□ -1.08
MSH5-212ENST00000467319 RNF2Q99496 336 aa8.29□□□□□ -1.08
MSH5-212ENST00000467319 SPAG8Q99932 426 aaPredicted RBP8.29□□□□□ -1.08
MSH5-212ENST00000467319 GGACTQ9BVM4 153 aa8.29□□□□□ -1.08
MSH5-212ENST00000467319 SELENOKQ9Y6D0 94 aa8.29□□□□□ -1.08
MSH5-212ENST00000467319 STAB2Q8WWQ8 2551 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 111.9 ms