RNA–Protein interactions for RNA: ENST00000458268.5

USP39-209, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 751 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-209ENST00000458268 SPAG8Q99932 426 aaPredicted RBP13.99□□□□□ -0.17
USP39-209ENST00000458268 C20orf85Q9H1P6 137 aa13.99□□□□□ -0.17
USP39-209ENST00000458268 ZFAND3Q9H8U3 227 aa13.99□□□□□ -0.17
USP39-209ENST00000458268 U3KQ87 197 aa13.99□□□□□ -0.17
USP39-209ENST00000458268 OR4C46A6NHA9 309 aa13.98□□□□□ -0.17
USP39-209ENST00000458268 A8MZ25 164 aa13.98□□□□□ -0.17
USP39-209ENST00000458268 TSPAN4O14817 238 aa13.98□□□□□ -0.17
USP39-209ENST00000458268 SCGB1D2O95969 90 aa13.98□□□□□ -0.17
USP39-209ENST00000458268 IFNA21P01568 189 aa13.98□□□□□ -0.17
USP39-209ENST00000458268 APOHP02749 345 aaPredicted RBP13.98□□□□□ -0.17
USP39-209ENST00000458268 BMI1P35226 326 aa13.98□□□□□ -0.17
USP39-209ENST00000458268 TCF24Q7RTU0 167 aa13.98□□□□□ -0.17
USP39-209ENST00000458268 OR10C1Q96KK4 312 aa13.98□□□□□ -0.17
USP39-209ENST00000458268 FAM110AQ9BQ89 295 aa13.98□□□□□ -0.17
USP39-209ENST00000458268 TRAV30A0A087WSZ9 112 aa13.97□□□□□ -0.17
USP39-209ENST00000458268 RBMY1BA6NDE4 496 aaKnown RBP13.97□□□□□ -0.17
USP39-209ENST00000458268 RBMY1EA6NEQ0 496 aaKnown RBP13.97□□□□□ -0.17
USP39-209ENST00000458268 MPTX1A8MV57 137 aa13.97□□□□□ -0.17
USP39-209ENST00000458268 H3BP45 60 aa13.97□□□□□ -0.17
USP39-209ENST00000458268 MED6O75586 246 aa13.97□□□□□ -0.17
USP39-209ENST00000458268 RBMY1DP0C7P1 496 aaKnown RBP13.97□□□□□ -0.17
USP39-209ENST00000458268 RAB11AP62491 216 aa13.97□□□□□ -0.17
USP39-209ENST00000458268 OR1S2Q8NGQ3 325 aa13.97□□□□□ -0.17
USP39-209ENST00000458268 SLC35E1Q96K37 410 aa13.97□□□□□ -0.17
USP39-209ENST00000458268 METTL26Q96S19 204 aa13.97□□□□□ -0.17
USP39-209ENST00000458268 SPATA25Q9BR10 227 aa13.97□□□□□ -0.17
USP39-209ENST00000458268 CCDC32Q9BV29 185 aa13.97□□□□□ -0.17
USP39-209ENST00000458268 A6NHS1 94 aa13.96□□□□□ -0.17
USP39-209ENST00000458268 SYNGR2O43760 224 aa13.96□□□□□ -0.17
USP39-209ENST00000458268 PITX3O75364 302 aa13.96□□□□□ -0.17
USP39-209ENST00000458268 IGKV1-17P01599 117 aa13.96□□□□□ -0.17
USP39-209ENST00000458268 IGLC1P0CG04 106 aa13.96□□□□□ -0.17
USP39-209ENST00000458268 NPPCP23582 126 aa13.96□□□□□ -0.17
USP39-209ENST00000458268 Q8WTZ3 238 aa13.96□□□□□ -0.17
USP39-209ENST00000458268 S100ZQ8WXG8 99 aa13.96□□□□□ -0.17
USP39-209ENST00000458268 NARS2Q96I59 477 aaKnown RBP13.96□□□□□ -0.17
USP39-209ENST00000458268 TM2D3Q9BRN9 247 aa13.96□□□□□ -0.17
USP39-209ENST00000458268 DNASE2O00115 360 aaPredicted RBP13.95□□□□□ -0.18
USP39-209ENST00000458268 DFFBO76075 338 aa13.95□□□□□ -0.18
USP39-209ENST00000458268 TCRBP04435 133 aa13.95□□□□□ -0.18
USP39-209ENST00000458268 SLC25A6P12236 298 aa13.95□□□□□ -0.18
USP39-209ENST00000458268 SPANXN5Q5MJ07 72 aa13.95□□□□□ -0.18
USP39-209ENST00000458268 TMEM231Q9H6L2 316 aa13.95□□□□□ -0.18
USP39-209ENST00000458268 NUDT15Q9NV35 164 aa13.95□□□□□ -0.18
USP39-209ENST00000458268 RABAC1Q9UI14 185 aa13.95□□□□□ -0.18
USP39-209ENST00000458268 ZFP92A6NM28 416 aa13.94□□□□□ -0.18
USP39-209ENST00000458268 FAM90A26D6RGX4 464 aa13.94□□□□□ -0.18
USP39-209ENST00000458268 CCSO14618 274 aa13.94□□□□□ -0.18
USP39-209ENST00000458268 IL4P05112 153 aa13.94□□□□□ -0.18
USP39-209ENST00000458268 LILRB2Q8N423 598 aa13.94□□□□□ -0.18
USP39-209ENST00000458268 CIB3Q96Q77 187 aaPredicted RBP13.94□□□□□ -0.18
USP39-209ENST00000458268 SEC22CQ9BRL7 303 aa13.94□□□□□ -0.18
USP39-209ENST00000458268 PBDC1Q9BVG4 233 aa13.94□□□□□ -0.18
USP39-209ENST00000458268 PTTG2Q9NZH5 202 aa13.94□□□□□ -0.18
USP39-209ENST00000458268 GSKIPQ9P0R6 139 aa13.94□□□□□ -0.18
USP39-209ENST00000458268 FAM240BA0A1B0GVZ2 78 aa13.93□□□□□ -0.18
USP39-209ENST00000458268 FAM25EA8MYX2 175 aa13.93□□□□□ -0.18
USP39-209ENST00000458268 SSSCA1O60232 199 aa13.93□□□□□ -0.18
USP39-209ENST00000458268 RPL35AP18077 110 aaKnown RBP13.93□□□□□ -0.18
USP39-209ENST00000458268 NKX2-1P43699 371 aaPredicted RBP13.93□□□□□ -0.18
USP39-209ENST00000458268 POLR2GP62487 172 aaKnown RBP eCLIP13.93□□□□□ -0.18
USP39-209ENST00000458268 PAFAH1B2P68402 229 aa13.93□□□□□ -0.18
USP39-209ENST00000458268 RPP30P78346 268 aaKnown RBP13.93□□□□□ -0.18
USP39-209ENST00000458268 ODF3L2Q3SX64 289 aa13.93□□□□□ -0.18
USP39-209ENST00000458268 APRG1Q8IVJ8 170 aa13.93□□□□□ -0.18
USP39-209ENST00000458268 STXBP6Q8NFX7 210 aa13.93□□□□□ -0.18
USP39-209ENST00000458268 CITED4Q96RK1 184 aa13.93□□□□□ -0.18
USP39-209ENST00000458268 GGTLC1Q9BX51 225 aa13.93□□□□□ -0.18
USP39-209ENST00000458268 LOC102724200A0A096LPH7 203 aaPredicted RBP13.92□□□□□ -0.18
USP39-209ENST00000458268 A0A1W2PS18 150 aa13.92□□□□□ -0.18
USP39-209ENST00000458268 RD3LP0DJH9 198 aa13.92□□□□□ -0.18
USP39-209ENST00000458268 P2RY1P47900 373 aa13.92□□□□□ -0.18
USP39-209ENST00000458268 ZNF846Q147U1 533 aa13.92□□□□□ -0.18
USP39-209ENST00000458268 ZNF124Q15973 351 aa13.92□□□□□ -0.18
USP39-209ENST00000458268 IAH1Q2TAA2 248 aaPredicted RBP13.92□□□□□ -0.18
USP39-209ENST00000458268 MZT2BQ6NZ67 158 aa13.92□□□□□ -0.18
USP39-209ENST00000458268 GRAMD2BQ96HH9 432 aa13.92□□□□□ -0.18
USP39-209ENST00000458268 WDR12Q9GZL7 423 aaKnown RBP13.92□□□□□ -0.18
USP39-209ENST00000458268 SMCO3A2RU48 225 aa13.91□□□□□ -0.18
USP39-209ENST00000458268 HNRNPCP07910 306 aaKnown RBP eCLIP13.91□□□□□ -0.18
USP39-209ENST00000458268 H2AFB2P0C5Z0 115 aa13.91□□□□□ -0.18
USP39-209ENST00000458268 YPEL3P61236 119 aaPredicted RBP13.91□□□□□ -0.18
USP39-209ENST00000458268 OR2F1Q13607 317 aa13.91□□□□□ -0.18
USP39-209ENST00000458268 GAMTQ14353 236 aa13.91□□□□□ -0.18
USP39-209ENST00000458268 MS4A6AQ9H2W1 248 aa13.91□□□□□ -0.18
USP39-209ENST00000458268 VSIRQ9H7M9 311 aa13.91□□□□□ -0.18
USP39-209ENST00000458268 PSENENQ9NZ42 101 aa13.91□□□□□ -0.18
USP39-209ENST00000458268 STRAPQ9Y3F4 350 aaKnown RBP13.91□□□□□ -0.18
USP39-209ENST00000458268 TOMM40O96008 361 aa13.9□□□□□ -0.18
USP39-209ENST00000458268 PSG1P11464 419 aa13.9□□□□□ -0.18
USP39-209ENST00000458268 ATP5IP56385 69 aaPredicted RBP13.9□□□□□ -0.18
USP39-209ENST00000458268 USF2Q15853 346 aaPredicted RBP13.9□□□□□ -0.18
USP39-209ENST00000458268 OR8G2PQ6IF36 304 aa13.9□□□□□ -0.18
USP39-209ENST00000458268 LINC00322Q6ZN03 302 aaPredicted RBP13.9□□□□□ -0.18
USP39-209ENST00000458268 OR51G1Q8NGK1 321 aa13.9□□□□□ -0.18
USP39-209ENST00000458268 ENKURQ8TC29 256 aa13.9□□□□□ -0.18
USP39-209ENST00000458268 TBC1D24Q9ULP9 559 aa13.9□□□□□ -0.18
USP39-209ENST00000458268 TENM3Q9P273 2699 aa13.9□□□□□ -0.18
USP39-209ENST00000458268 CRYBB3P26998 211 aa13.89□□□□□ -0.19
USP39-209ENST00000458268 GPX4P36969 197 aaPredicted RBP13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms