RNA–Protein interactions for RNA: ENST00000441602.5

VPS50-205, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best)

Gene VPS50, Length 3,474 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-205ENST00000441602 TGOLN2O43493 480 aa4.77□□□□□ -1.65
VPS50-205ENST00000441602 OR2C1O95371 312 aa4.77□□□□□ -1.65
VPS50-205ENST00000441602 TOMM40O96008 361 aa4.77□□□□□ -1.65
VPS50-205ENST00000441602 MFAP2P55001 183 aa4.77□□□□□ -1.65
VPS50-205ENST00000441602 CD81P60033 236 aa4.77□□□□□ -1.65
VPS50-205ENST00000441602 RPL19P84098 196 aaKnown RBP4.77□□□□□ -1.65
VPS50-205ENST00000441602 TIGITQ495A1 244 aa4.77□□□□□ -1.65
VPS50-205ENST00000441602 SPATA31B1PQ5VZV4 182 aa4.77□□□□□ -1.65
VPS50-205ENST00000441602 FAM90A2PQ658T7 463 aa4.77□□□□□ -1.65
VPS50-205ENST00000441602 OR5T1Q8NG75 326 aa4.77□□□□□ -1.65
VPS50-205ENST00000441602 C17orf50Q8WW18 174 aa4.77□□□□□ -1.65
VPS50-205ENST00000441602 NRGNQ92686 78 aa4.77□□□□□ -1.65
VPS50-205ENST00000441602 ATP6V0BQ99437 205 aa4.77□□□□□ -1.65
VPS50-205ENST00000441602 C20orf24Q9BUV8 137 aa4.77□□□□□ -1.65
VPS50-205ENST00000441602 SDF2L1Q9HCN8 221 aa4.77□□□□□ -1.65
VPS50-205ENST00000441602 SEPSECSQ9HD40 501 aaKnown RBP4.77□□□□□ -1.65
VPS50-205ENST00000441602 MDFIC2A0A1B0GVS7 189 aa4.77□□□□□ -1.65
VPS50-205ENST00000441602 FAM74A7A6NL05 159 aa4.77□□□□□ -1.65
VPS50-205ENST00000441602 RNF223E7ERA6 249 aa4.77□□□□□ -1.65
VPS50-205ENST00000441602 K7EIM0 57 aa4.77□□□□□ -1.65
VPS50-205ENST00000441602 IGLC1P0CG04 106 aa4.77□□□□□ -1.65
VPS50-205ENST00000441602 GATA2P23769 480 aaPredicted RBP4.77□□□□□ -1.65
VPS50-205ENST00000441602 AKR1C3P42330 323 aa4.77□□□□□ -1.65
VPS50-205ENST00000441602 FAM209BQ5JX69 171 aa4.77□□□□□ -1.65
VPS50-205ENST00000441602 BRD3OSQ6XYD6 125 aa4.77□□□□□ -1.65
VPS50-205ENST00000441602 LINC00305Q7Z4B0 112 aa4.77□□□□□ -1.65
VPS50-205ENST00000441602 C5orf56Q8N8D9 126 aa4.77□□□□□ -1.65
VPS50-205ENST00000441602 NECAP1Q8NC96 275 aa4.77□□□□□ -1.65
VPS50-205ENST00000441602 OR4F17Q8NGA8 305 aa4.77□□□□□ -1.65
VPS50-205ENST00000441602 PARLQ9H300 379 aa4.77□□□□□ -1.65
VPS50-205ENST00000441602 IGKV1D-37A0A075B6S9 117 aa4.76□□□□□ -1.65
VPS50-205ENST00000441602 IGKV1OR2-108A0A075B7D4 117 aa4.76□□□□□ -1.65
VPS50-205ENST00000441602 TRAV41A0A0B4J266 112 aa4.76□□□□□ -1.65
VPS50-205ENST00000441602 H3BUA1 57 aa4.76□□□□□ -1.65
VPS50-205ENST00000441602 H3BUX3 64 aa4.76□□□□□ -1.65
VPS50-205ENST00000441602 H7BYZ3 331 aa4.76□□□□□ -1.65
VPS50-205ENST00000441602 CLDN34H7C241 214 aa4.76□□□□□ -1.65
VPS50-205ENST00000441602 OR2J3O76001 311 aa4.76□□□□□ -1.65
VPS50-205ENST00000441602 IGHV3-48P01763 117 aa4.76□□□□□ -1.65
VPS50-205ENST00000441602 S100A9P06702 114 aaKnown RBP4.76□□□□□ -1.65
VPS50-205ENST00000441602 PAX6P26367 422 aa4.76□□□□□ -1.65
VPS50-205ENST00000441602 RAB9AP51151 201 aa4.76□□□□□ -1.65
VPS50-205ENST00000441602 CNN1P51911 297 aaKnown RBP4.76□□□□□ -1.65
VPS50-205ENST00000441602 ANAPC16Q96DE5 110 aa4.76□□□□□ -1.65
VPS50-205ENST00000441602 A6NDX4 124 aa4.76□□□□□ -1.65
VPS50-205ENST00000441602 FAM223BA6NKX1 122 aa4.76□□□□□ -1.65
VPS50-205ENST00000441602 ATP6V0E1O15342 81 aa4.76□□□□□ -1.65
VPS50-205ENST00000441602 EIF3GO75821 320 aaKnown RBP eCLIP4.76□□□□□ -1.65
VPS50-205ENST00000441602 IGHV4-38-2P0DP08 117 aa4.76□□□□□ -1.65
VPS50-205ENST00000441602 COL8A1P27658 744 aa4.76□□□□□ -1.65
VPS50-205ENST00000441602 ATP5G3P48201 142 aa4.76□□□□□ -1.65
VPS50-205ENST00000441602 SSBP2P81877 361 aaPredicted RBP4.76□□□□□ -1.65
VPS50-205ENST00000441602 ZNF90Q03938 601 aa4.76□□□□□ -1.65
VPS50-205ENST00000441602 ATP5G2Q06055 141 aa4.76□□□□□ -1.65
VPS50-205ENST00000441602 TMEM88Q6PEY1 159 aa4.76□□□□□ -1.65
VPS50-205ENST00000441602 CBLN2Q8IUK8 224 aa4.76□□□□□ -1.65
VPS50-205ENST00000441602 FAM223AQ8IWN6 122 aa4.76□□□□□ -1.65
VPS50-205ENST00000441602 C11orf52Q96A22 123 aa4.76□□□□□ -1.65
VPS50-205ENST00000441602 MLXQ9UH92 298 aa4.76□□□□□ -1.65
VPS50-205ENST00000441602 TNCP24821 2201 aa4.76□□□□□ -1.65
VPS50-205ENST00000441602 AP4M1O00189 453 aa4.76□□□□□ -1.65
VPS50-205ENST00000441602 ATF4P18848 351 aaPredicted RBP4.76□□□□□ -1.65
VPS50-205ENST00000441602 FCGR2BP31994 310 aaPredicted RBP4.76□□□□□ -1.65
VPS50-205ENST00000441602 RAB5BP61020 215 aa4.76□□□□□ -1.65
VPS50-205ENST00000441602 LY6EQ16553 131 aa4.76□□□□□ -1.65
VPS50-205ENST00000441602 KCNIP4Q6PIL6 250 aa4.76□□□□□ -1.65
VPS50-205ENST00000441602 ZNF600Q6ZNG1 722 aa4.76□□□□□ -1.65
VPS50-205ENST00000441602 BPIFA4PQ86YQ2 179 aa4.76□□□□□ -1.65
VPS50-205ENST00000441602 BIN3Q9NQY0 253 aa4.76□□□□□ -1.65
VPS50-205ENST00000441602 LY96Q9Y6Y9 160 aa4.76□□□□□ -1.65
VPS50-205ENST00000441602 TRBV7-1A0A0A6YYK4 115 aa4.75□□□□□ -1.65
VPS50-205ENST00000441602 C1orf196B1AJZ1 125 aa4.75□□□□□ -1.65
VPS50-205ENST00000441602 BMPR1BO00238 502 aa4.75□□□□□ -1.65
VPS50-205ENST00000441602 NDUFB8O95169 186 aa4.75□□□□□ -1.65
VPS50-205ENST00000441602 IGHV4-31P0DP07 118 aa4.75□□□□□ -1.65
VPS50-205ENST00000441602 PSG1P11464 419 aa4.75□□□□□ -1.65
VPS50-205ENST00000441602 CRIP2P52943 208 aaPredicted RBP4.75□□□□□ -1.65
VPS50-205ENST00000441602 RHOGP84095 191 aa4.75□□□□□ -1.65
VPS50-205ENST00000441602 NDPQ00604 133 aa4.75□□□□□ -1.65
VPS50-205ENST00000441602 RELQ04864 619 aaPredicted RBP4.75□□□□□ -1.65
VPS50-205ENST00000441602 TMEM37Q8WXS4 190 aa4.75□□□□□ -1.65
VPS50-205ENST00000441602 RNF125Q96EQ8 232 aa4.75□□□□□ -1.65
VPS50-205ENST00000441602 AJUBAQ96IF1 538 aa4.75□□□□□ -1.65
VPS50-205ENST00000441602 Q96MF0 132 aa4.75□□□□□ -1.65
VPS50-205ENST00000441602 FANCD2OSQ96PS1 177 aa4.75□□□□□ -1.65
VPS50-205ENST00000441602 TMEM14CQ9P0S9 112 aa4.75□□□□□ -1.65
VPS50-205ENST00000441602 CFAP54Q96N23 3096 aa4.75□□□□□ -1.65
VPS50-205ENST00000441602 NDUFB4O95168 129 aa4.75□□□□□ -1.65
VPS50-205ENST00000441602 HIST1H1EP10412 219 aaKnown RBP4.75□□□□□ -1.65
VPS50-205ENST00000441602 CD99P14209 185 aa4.75□□□□□ -1.65
VPS50-205ENST00000441602 SCGB2A2Q13296 93 aa4.75□□□□□ -1.65
VPS50-205ENST00000441602 CMTM2Q8TAZ6 248 aa4.75□□□□□ -1.65
VPS50-205ENST00000441602 SLC25A2Q9BXI2 301 aa4.75□□□□□ -1.65
VPS50-205ENST00000441602 TMEM242Q9NWH2 141 aa4.75□□□□□ -1.65
VPS50-205ENST00000441602 MRPL36Q9P0J6 103 aaKnown RBP4.75□□□□□ -1.65
VPS50-205ENST00000441602 PSMB11A5LHX3 300 aa4.74□□□□□ -1.65
VPS50-205ENST00000441602 C9JCJ5 164 aa4.74□□□□□ -1.65
VPS50-205ENST00000441602 K7EQM0 130 aa4.74□□□□□ -1.65
VPS50-205ENST00000441602 IL4P05112 153 aa4.74□□□□□ -1.65
VPS50-205ENST00000441602 TAS2R60P59551 318 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms