RNA–Protein interactions for RNA: ENST00000433709.6

HDAC9-213, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 602 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-213ENST00000433709 SPNP16150 400 aa4.11□□□□□ -1.75
HDAC9-213ENST00000433709 SDC2P34741 201 aa4.11□□□□□ -1.75
HDAC9-213ENST00000433709 ID1P41134 155 aa4.11□□□□□ -1.75
HDAC9-213ENST00000433709 RPL27AP46776 148 aaKnown RBP4.11□□□□□ -1.75
HDAC9-213ENST00000433709 FHITP49789 147 aa4.11□□□□□ -1.75
HDAC9-213ENST00000433709 CMC4P56277 68 aaPredicted RBP4.11□□□□□ -1.75
HDAC9-213ENST00000433709 RPL8P62917 257 aaKnown RBP4.11□□□□□ -1.75
HDAC9-213ENST00000433709 RHOGP84095 191 aa4.11□□□□□ -1.75
HDAC9-213ENST00000433709 NDPQ00604 133 aa4.11□□□□□ -1.75
HDAC9-213ENST00000433709 UBE2NLQ5JXB2 153 aa4.11□□□□□ -1.75
HDAC9-213ENST00000433709 Q6ZR54 194 aa4.11□□□□□ -1.75
HDAC9-213ENST00000433709 TMEM17Q86X19 198 aa4.11□□□□□ -1.75
HDAC9-213ENST00000433709 TMEM167AQ8TBQ9 72 aa4.11□□□□□ -1.75
HDAC9-213ENST00000433709 DYNLRB2Q8TF09 96 aa4.11□□□□□ -1.75
HDAC9-213ENST00000433709 AP3S1Q92572 193 aa4.11□□□□□ -1.75
HDAC9-213ENST00000433709 MARC2Q969Z3 335 aa4.11□□□□□ -1.75
HDAC9-213ENST00000433709 EEF1AKMT3Q96AZ1 226 aa4.11□□□□□ -1.75
HDAC9-213ENST00000433709 TSC22D3Q99576 134 aa4.11□□□□□ -1.75
HDAC9-213ENST00000433709 PARP12Q9H0J9 701 aaKnown RBP4.11□□□□□ -1.75
HDAC9-213ENST00000433709 TUBA4BQ9H853 241 aa4.11□□□□□ -1.75
HDAC9-213ENST00000433709 HRASLSQ9HDD0 168 aa4.11□□□□□ -1.75
HDAC9-213ENST00000433709 BET1LQ9NYM9 111 aa4.11□□□□□ -1.75
HDAC9-213ENST00000433709 COMMD9Q9P000 198 aa4.11□□□□□ -1.75
HDAC9-213ENST00000433709 ZNF230Q9UIE0 474 aaPredicted RBP4.11□□□□□ -1.75
HDAC9-213ENST00000433709 FBXO7Q9Y3I1 522 aa4.11□□□□□ -1.75
HDAC9-213ENST00000433709 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP4.1□□□□□ -1.75
HDAC9-213ENST00000433709 TRAV25A0A0B4J276 109 aa4.1□□□□□ -1.75
HDAC9-213ENST00000433709 LOC100506127A0A0U1RQW1 187 aa4.1□□□□□ -1.75
HDAC9-213ENST00000433709 SULT1C2O00338 296 aa4.1□□□□□ -1.75
HDAC9-213ENST00000433709 SCGB2A1O75556 95 aa4.1□□□□□ -1.75
HDAC9-213ENST00000433709 SNAPC5O75971 98 aa4.1□□□□□ -1.75
HDAC9-213ENST00000433709 PPYP01298 95 aa4.1□□□□□ -1.75
HDAC9-213ENST00000433709 CD5P06127 495 aa4.1□□□□□ -1.75
HDAC9-213ENST00000433709 CRYGCP07315 174 aa4.1□□□□□ -1.75
HDAC9-213ENST00000433709 SAA1P0DJI8 122 aaPredicted RBP4.1□□□□□ -1.75
HDAC9-213ENST00000433709 NFYAP23511 347 aaPredicted RBP4.1□□□□□ -1.75
HDAC9-213ENST00000433709 PSMB6P28072 239 aa4.1□□□□□ -1.75
HDAC9-213ENST00000433709 PRSS3P35030 304 aa4.1□□□□□ -1.75
HDAC9-213ENST00000433709 BMI1P35226 326 aa4.1□□□□□ -1.75
HDAC9-213ENST00000433709 MXD1Q05195 221 aa4.1□□□□□ -1.75
HDAC9-213ENST00000433709 EXOSC2Q13868 293 aaKnown RBP4.1□□□□□ -1.75
HDAC9-213ENST00000433709 POU2AF1Q16633 256 aa4.1□□□□□ -1.75
HDAC9-213ENST00000433709 SLC16A13Q7RTY0 426 aa4.1□□□□□ -1.75
HDAC9-213ENST00000433709 GPHB5Q86YW7 130 aa4.1□□□□□ -1.75
HDAC9-213ENST00000433709 OR13F1Q8NGS4 319 aa4.1□□□□□ -1.75
HDAC9-213ENST00000433709 TYMSOSQ8TAI1 123 aa4.1□□□□□ -1.75
HDAC9-213ENST00000433709 LGALS14Q8TCE9 139 aa4.1□□□□□ -1.75
HDAC9-213ENST00000433709 ISOC1Q96CN7 298 aa4.1□□□□□ -1.75
HDAC9-213ENST00000433709 TMEM56Q96MV1 263 aa4.1□□□□□ -1.75
HDAC9-213ENST00000433709 SLC5A7Q9GZV3 580 aa4.1□□□□□ -1.75
HDAC9-213ENST00000433709 AUNIPQ9H7T9 357 aa4.1□□□□□ -1.75
HDAC9-213ENST00000433709 ZNF430Q9H8G1 570 aaPredicted RBP4.1□□□□□ -1.75
HDAC9-213ENST00000433709 RABL2AQ9UBK7 228 aaPredicted RBP4.1□□□□□ -1.75
HDAC9-213ENST00000433709 CACFD1Q9UGQ2 172 aa4.1□□□□□ -1.75
HDAC9-213ENST00000433709 RABL2BQ9UNT1 228 aa4.1□□□□□ -1.75
HDAC9-213ENST00000433709 ANK2Q01484 3957 aa4.1□□□□□ -1.75
HDAC9-213ENST00000433709 TEX48A0A1B0GUV7 120 aa4.09□□□□□ -1.75
HDAC9-213ENST00000433709 TRIM64CA6NLI5 447 aa4.09□□□□□ -1.75
HDAC9-213ENST00000433709 PHOX2AO14813 284 aa4.09□□□□□ -1.75
HDAC9-213ENST00000433709 B3GALNT1O75752 331 aa4.09□□□□□ -1.75
HDAC9-213ENST00000433709 ZNF735P0CB33 412 aa4.09□□□□□ -1.75
HDAC9-213ENST00000433709 RPA2P15927 270 aa4.09□□□□□ -1.75
HDAC9-213ENST00000433709 HLA-GP17693 338 aa4.09□□□□□ -1.75
HDAC9-213ENST00000433709 TBPP20226 339 aa4.09□□□□□ -1.75
HDAC9-213ENST00000433709 F2RP25116 425 aa4.09□□□□□ -1.75
HDAC9-213ENST00000433709 SYNJ2BPP57105 145 aa4.09□□□□□ -1.75
HDAC9-213ENST00000433709 TSPAN5P62079 268 aa4.09□□□□□ -1.75
HDAC9-213ENST00000433709 PJVKQ0ZLH3 352 aa4.09□□□□□ -1.75
HDAC9-213ENST00000433709 NEDD8Q15843 81 aa4.09□□□□□ -1.75
HDAC9-213ENST00000433709 KLK9Q2XQG4 91 aa4.09□□□□□ -1.75
HDAC9-213ENST00000433709 ZNF506Q5JVG8 444 aa4.09□□□□□ -1.75
HDAC9-213ENST00000433709 TMEM69Q5SWH9 247 aa4.09□□□□□ -1.75
HDAC9-213ENST00000433709 AADACL3Q5VUY0 350 aa4.09□□□□□ -1.75
HDAC9-213ENST00000433709 LAMTOR1Q6IAA8 161 aa4.09□□□□□ -1.75
HDAC9-213ENST00000433709 TMUB2Q71RG4 321 aa4.09□□□□□ -1.75
HDAC9-213ENST00000433709 SLC38A6Q8IZM9 456 aa4.09□□□□□ -1.75
HDAC9-213ENST00000433709 PUSL1Q8N0Z8 303 aaKnown RBP4.09□□□□□ -1.75
HDAC9-213ENST00000433709 OR5H2Q8NGV7 314 aa4.09□□□□□ -1.75
HDAC9-213ENST00000433709 OR5B3Q8NH48 314 aa4.09□□□□□ -1.75
HDAC9-213ENST00000433709 MUC7Q8TAX7 377 aa4.09□□□□□ -1.75
HDAC9-213ENST00000433709 VN1R17PQ8TDU5 208 aa4.09□□□□□ -1.75
HDAC9-213ENST00000433709 MAFIPQ8WZ33 124 aa4.09□□□□□ -1.75
HDAC9-213ENST00000433709 ALX4Q9H161 411 aaPredicted RBP4.09□□□□□ -1.75
HDAC9-213ENST00000433709 PRR34Q9NV39 138 aa4.09□□□□□ -1.75
HDAC9-213ENST00000433709 TAS2R8Q9NYW2 309 aa4.09□□□□□ -1.75
HDAC9-213ENST00000433709 KLK9Q9UKQ9 250 aa4.09□□□□□ -1.75
HDAC9-213ENST00000433709 PRNDQ9UKY0 176 aa4.09□□□□□ -1.75
HDAC9-213ENST00000433709 UFC1Q9Y3C8 167 aa4.09□□□□□ -1.75
HDAC9-213ENST00000433709 PKD1L1Q8TDX9 2849 aa4.09□□□□□ -1.75
HDAC9-213ENST00000433709 NOTCH1P46531 2555 aa4.08□□□□□ -1.76
HDAC9-213ENST00000433709 VWFP04275 2813 aa4.08□□□□□ -1.76
HDAC9-213ENST00000433709 J3QRK9 145 aa4.08□□□□□ -1.76
HDAC9-213ENST00000433709 GPR31O00270 319 aa4.08□□□□□ -1.76
HDAC9-213ENST00000433709 UPK2O00526 184 aa4.08□□□□□ -1.76
HDAC9-213ENST00000433709 APOA1P02647 267 aa4.08□□□□□ -1.76
HDAC9-213ENST00000433709 TRAPPC2P0DI81 140 aa4.08□□□□□ -1.76
HDAC9-213ENST00000433709 TRAPPC2BP0DI82 140 aa4.08□□□□□ -1.76
HDAC9-213ENST00000433709 PTBP1P26599 531 aaKnown RBP eCLIP4.08□□□□□ -1.76
HDAC9-213ENST00000433709 RORCP51449 518 aa4.08□□□□□ -1.76
HDAC9-213ENST00000433709 PLET1Q6UQ28 207 aa4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms