RNA–Protein interactions for RNA: ENST00000413872.6

PHRF1-202, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,224 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-202ENST00000413872 C15orf32Q32M92 178 aa14.21□□□□□ -0.13
PHRF1-202ENST00000413872 BPESC1Q9GZL8 116 aa14.21□□□□□ -0.13
PHRF1-202ENST00000413872 TRGV11A0A075B6L2 103 aa14.21□□□□□ -0.13
PHRF1-202ENST00000413872 A0A1B0GWJ7 208 aa14.21□□□□□ -0.13
PHRF1-202ENST00000413872 PRSS2P07478 247 aa14.21□□□□□ -0.13
PHRF1-202ENST00000413872 KLRD1Q13241 179 aa14.21□□□□□ -0.13
PHRF1-202ENST00000413872 H0YJW9 148 aa14.21□□□□□ -0.14
PHRF1-202ENST00000413872 TRBV7-1A0A0A6YYK4 115 aa14.2□□□□□ -0.14
PHRF1-202ENST00000413872 F8VVB4 439 aa14.2□□□□□ -0.14
PHRF1-202ENST00000413872 F8VWA3 439 aa14.2□□□□□ -0.14
PHRF1-202ENST00000413872 COL8A2P25067 703 aa14.2□□□□□ -0.14
PHRF1-202ENST00000413872 JOSD1Q15040 202 aaPredicted RBP14.2□□□□□ -0.14
PHRF1-202ENST00000413872 SCN8AQ9UQD0 1980 aa14.2□□□□□ -0.14
PHRF1-202ENST00000413872 IZUMO1RA6ND01 250 aa14.2□□□□□ -0.14
PHRF1-202ENST00000413872 CBLN1P23435 193 aa14.2□□□□□ -0.14
PHRF1-202ENST00000413872 EFNB3Q15768 340 aa14.2□□□□□ -0.14
PHRF1-202ENST00000413872 SPATA45Q537H7 98 aa14.2□□□□□ -0.14
PHRF1-202ENST00000413872 SLC25A34Q6PIV7 304 aa14.2□□□□□ -0.14
PHRF1-202ENST00000413872 SIGLEC15Q6ZMC9 328 aa14.2□□□□□ -0.14
PHRF1-202ENST00000413872 COQ2Q96H96 371 aa14.2□□□□□ -0.14
PHRF1-202ENST00000413872 PMCHL2Q9BQD1 86 aa14.2□□□□□ -0.14
PHRF1-202ENST00000413872 SRSF8Q9BRL6 282 aaKnown RBP14.2□□□□□ -0.14
PHRF1-202ENST00000413872 ROS1P08922 2347 aa14.2□□□□□ -0.14
PHRF1-202ENST00000413872 RPL24P83731 157 aaKnown RBP14.2□□□□□ -0.14
PHRF1-202ENST00000413872 ZNF585BQ52M93 769 aa14.2□□□□□ -0.14
PHRF1-202ENST00000413872 ORMDL3Q8N138 153 aa14.2□□□□□ -0.14
PHRF1-202ENST00000413872 UQCR10Q9UDW1 63 aa14.2□□□□□ -0.14
PHRF1-202ENST00000413872 ABCA4P78363 2273 aa14.2□□□□□ -0.14
PHRF1-202ENST00000413872 PRR30Q53SZ7 412 aaPredicted RBP14.19□□□□□ -0.14
PHRF1-202ENST00000413872 TEX38Q6PEX7 206 aa14.19□□□□□ -0.14
PHRF1-202ENST00000413872 PSG8Q9UQ74 426 aa14.19□□□□□ -0.14
PHRF1-202ENST00000413872 IGKV3OR2-268A0A0C4DH90 116 aa14.19□□□□□ -0.14
PHRF1-202ENST00000413872 ZNF98A6NK75 572 aa14.19□□□□□ -0.14
PHRF1-202ENST00000413872 C1QTNF9BB2RNN3 333 aa14.19□□□□□ -0.14
PHRF1-202ENST00000413872 CD55P08174 381 aa14.19□□□□□ -0.14
PHRF1-202ENST00000413872 CD7P09564 240 aa14.19□□□□□ -0.14
PHRF1-202ENST00000413872 CACNG7P62955 275 aa14.19□□□□□ -0.14
PHRF1-202ENST00000413872 TSC2P49815 1807 aa14.19□□□□□ -0.14
PHRF1-202ENST00000413872 A6NNC1 897 aa14.19□□□□□ -0.14
PHRF1-202ENST00000413872 LILRA1O75019 489 aa14.19□□□□□ -0.14
PHRF1-202ENST00000413872 OR10W1Q8NGF6 305 aa14.19□□□□□ -0.14
PHRF1-202ENST00000413872 TRGV9Q99603 122 aa14.19□□□□□ -0.14
PHRF1-202ENST00000413872 OR11H12B2RN74 326 aa14.19□□□□□ -0.14
PHRF1-202ENST00000413872 RPLP1P05386 114 aaKnown RBP14.19□□□□□ -0.14
PHRF1-202ENST00000413872 TCTAP57738 103 aa14.19□□□□□ -0.14
PHRF1-202ENST00000413872 NSUN5P1Q3KNT7 163 aa14.19□□□□□ -0.14
PHRF1-202ENST00000413872 OR11H1Q8NG94 326 aa14.19□□□□□ -0.14
PHRF1-202ENST00000413872 OR11H2Q8NH07 326 aa14.19□□□□□ -0.14
PHRF1-202ENST00000413872 GATA4P43694 442 aa14.18□□□□□ -0.14
PHRF1-202ENST00000413872 TMEM219Q86XT9 240 aa14.18□□□□□ -0.14
PHRF1-202ENST00000413872 Q8TCH9 128 aa14.18□□□□□ -0.14
PHRF1-202ENST00000413872 DPH3Q96FX2 82 aa14.18□□□□□ -0.14
PHRF1-202ENST00000413872 ZNF414Q96IQ9 312 aa14.18□□□□□ -0.14
PHRF1-202ENST00000413872 H0YIZ8 118 aa14.18□□□□□ -0.14
PHRF1-202ENST00000413872 CDX1P47902 265 aaPredicted RBP14.18□□□□□ -0.14
PHRF1-202ENST00000413872 HIST1H4GQ99525 98 aa14.18□□□□□ -0.14
PHRF1-202ENST00000413872 CBY1Q9Y3M2 126 aa14.18□□□□□ -0.14
PHRF1-202ENST00000413872 C5orf63A6NC05 138 aa14.18□□□□□ -0.14
PHRF1-202ENST00000413872 H3BRM9 83 aa14.18□□□□□ -0.14
PHRF1-202ENST00000413872 SLC17A3O00476 420 aa14.18□□□□□ -0.14
PHRF1-202ENST00000413872 TREML4Q6UXN2 200 aa14.18□□□□□ -0.14
PHRF1-202ENST00000413872 OSTCQ9NRP0 149 aa14.18□□□□□ -0.14
PHRF1-202ENST00000413872 DOCK8Q8NF50 2099 aa14.18□□□□□ -0.14
PHRF1-202ENST00000413872 C7orf71A4D174 169 aa14.18□□□□□ -0.14
PHRF1-202ENST00000413872 GRIFINA4D1Z8 144 aa14.18□□□□□ -0.14
PHRF1-202ENST00000413872 COL5A1-AS1Q5SY13 56 aa14.18□□□□□ -0.14
PHRF1-202ENST00000413872 MBD3L1Q8WWY6 194 aa14.18□□□□□ -0.14
PHRF1-202ENST00000413872 J3QKU1 62 aa14.18□□□□□ -0.14
PHRF1-202ENST00000413872 FOXA3P55318 350 aaPredicted RBP14.18□□□□□ -0.14
PHRF1-202ENST00000413872 QRFPP83859 136 aa14.18□□□□□ -0.14
PHRF1-202ENST00000413872 C10orf55Q5SWW7 151 aa14.18□□□□□ -0.14
PHRF1-202ENST00000413872 BRD3OSQ6XYD6 125 aa14.18□□□□□ -0.14
PHRF1-202ENST00000413872 NBASA2RRP1 2371 aa14.17□□□□□ -0.14
PHRF1-202ENST00000413872 MSMBP08118 114 aa14.17□□□□□ -0.14
PHRF1-202ENST00000413872 NCOR1P1Q9H4R4 102 aa14.17□□□□□ -0.14
PHRF1-202ENST00000413872 FAM223BA6NKX1 122 aa14.17□□□□□ -0.14
PHRF1-202ENST00000413872 FAM223AQ8IWN6 122 aa14.17□□□□□ -0.14
PHRF1-202ENST00000413872 F11RQ9Y624 299 aaKnown RBP14.17□□□□□ -0.14
PHRF1-202ENST00000413872 POLEQ07864 2286 aa14.17□□□□□ -0.14
PHRF1-202ENST00000413872 SRD5A1P18405 259 aa14.17□□□□□ -0.14
PHRF1-202ENST00000413872 NMSQ5H8A3 153 aa14.17□□□□□ -0.14
PHRF1-202ENST00000413872 PROK2Q9HC23 129 aa14.17□□□□□ -0.14
PHRF1-202ENST00000413872 LINC00527Q9UJ94 153 aa14.17□□□□□ -0.14
PHRF1-202ENST00000413872 SIGLEC9Q9Y336 463 aa14.17□□□□□ -0.14
PHRF1-202ENST00000413872 HEATR1Q9H583 2144 aaKnown RBP14.17□□□□□ -0.14
PHRF1-202ENST00000413872 PYYP10082 97 aa14.16□□□□□ -0.14
PHRF1-202ENST00000413872 ZNF25P17030 456 aaPredicted RBP14.16□□□□□ -0.14
PHRF1-202ENST00000413872 SCGB3A1Q96QR1 104 aa14.16□□□□□ -0.14
PHRF1-202ENST00000413872 RNF114Q9Y508 228 aa14.16□□□□□ -0.14
PHRF1-202ENST00000413872 C1QTNF9P0C862 333 aa14.16□□□□□ -0.14
PHRF1-202ENST00000413872 HTN3P15516 51 aa14.16□□□□□ -0.14
PHRF1-202ENST00000413872 BEND2Q8NDZ0 799 aa14.16□□□□□ -0.14
PHRF1-202ENST00000413872 NEUROG1Q92886 237 aa14.16□□□□□ -0.14
PHRF1-202ENST00000413872 GGTLC1Q9BX51 225 aa14.16□□□□□ -0.14
PHRF1-202ENST00000413872 TNFSF13O75888 250 aa14.16□□□□□ -0.14
PHRF1-202ENST00000413872 PPBPP02775 128 aa14.16□□□□□ -0.14
PHRF1-202ENST00000413872 HIGD1CA8MV81 97 aa14.15□□□□□ -0.14
PHRF1-202ENST00000413872 H3BVH4 76 aa14.15□□□□□ -0.14
PHRF1-202ENST00000413872 EMP1P54849 157 aa14.15□□□□□ -0.14
PHRF1-202ENST00000413872 RPL23P62829 140 aaKnown RBP14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms