RNA–Protein interactions for RNA: ENST00000411690.2

LINC00396-201, long intergenic non-protein coding RNA 396, humanhuman

TSL 3 BASIC

Gene LINC00396, Length 439 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00396-201ENST00000411690 RAB22AQ9UL26 194 aa4.35□□□□□ -1.71
LINC00396-201ENST00000411690 V9GY05 133 aa4.35□□□□□ -1.71
LINC00396-201ENST00000411690 TRBV6-7A0A0A0MS04 114 aa4.34□□□□□ -1.71
LINC00396-201ENST00000411690 A0A1W2PS18 150 aa4.34□□□□□ -1.71
LINC00396-201ENST00000411690 TMEM14DPA8MWL7 114 aa4.34□□□□□ -1.71
LINC00396-201ENST00000411690 H3BMM0 161 aa4.34□□□□□ -1.71
LINC00396-201ENST00000411690 K7EIM0 57 aa4.34□□□□□ -1.71
LINC00396-201ENST00000411690 HRASP01112 189 aa4.34□□□□□ -1.71
LINC00396-201ENST00000411690 SERPINE2P07093 398 aa4.34□□□□□ -1.71
LINC00396-201ENST00000411690 DEFB130BP0DP73 79 aa4.34□□□□□ -1.71
LINC00396-201ENST00000411690 DEFB130AP0DP74 79 aa4.34□□□□□ -1.71
LINC00396-201ENST00000411690 RORCP51449 518 aa4.34□□□□□ -1.71
LINC00396-201ENST00000411690 CLDN12P56749 244 aa4.34□□□□□ -1.71
LINC00396-201ENST00000411690 FXYD7P58549 80 aa4.34□□□□□ -1.71
LINC00396-201ENST00000411690 RPL30P62888 115 aaKnown RBP4.34□□□□□ -1.71
LINC00396-201ENST00000411690 UNC119Q13432 240 aa4.34□□□□□ -1.71
LINC00396-201ENST00000411690 SSX1Q16384 188 aa4.34□□□□□ -1.71
LINC00396-201ENST00000411690 RRN3P1Q2M238 152 aa4.34□□□□□ -1.71
LINC00396-201ENST00000411690 C2orf76Q3KRA6 126 aa4.34□□□□□ -1.71
LINC00396-201ENST00000411690 TOMM20LQ6UXN7 152 aa4.34□□□□□ -1.71
LINC00396-201ENST00000411690 AKAP14Q86UN6 197 aa4.34□□□□□ -1.71
LINC00396-201ENST00000411690 ZNF485Q8NCK3 441 aa4.34□□□□□ -1.71
LINC00396-201ENST00000411690 RNF125Q96EQ8 232 aa4.34□□□□□ -1.71
LINC00396-201ENST00000411690 CABLES2Q9BTV7 478 aa4.34□□□□□ -1.71
LINC00396-201ENST00000411690 LPAR5Q9H1C0 372 aa4.34□□□□□ -1.71
LINC00396-201ENST00000411690 BET1LQ9NYM9 111 aa4.34□□□□□ -1.71
LINC00396-201ENST00000411690 FAM30AQ9NZY2 134 aa4.34□□□□□ -1.71
LINC00396-201ENST00000411690 SSR3Q9UNL2 185 aa4.34□□□□□ -1.71
LINC00396-201ENST00000411690 LSM2Q9Y333 95 aaKnown RBP4.34□□□□□ -1.71
LINC00396-201ENST00000411690 IGLV5-52A0A0A0MRZ9 124 aa4.33□□□□□ -1.72
LINC00396-201ENST00000411690 A0A0A6YYD4 124 aa4.33□□□□□ -1.72
LINC00396-201ENST00000411690 TMEM272A0A1B0GTI8 110 aa4.33□□□□□ -1.72
LINC00396-201ENST00000411690 HELTA6NFD8 242 aa4.33□□□□□ -1.72
LINC00396-201ENST00000411690 LYRM9A8MSI8 78 aa4.33□□□□□ -1.72
LINC00396-201ENST00000411690 DIRAS3O95661 229 aa4.33□□□□□ -1.72
LINC00396-201ENST00000411690 ATP5G1P05496 136 aa4.33□□□□□ -1.72
LINC00396-201ENST00000411690 RAB3BP20337 219 aa4.33□□□□□ -1.72
LINC00396-201ENST00000411690 NPPCP23582 126 aa4.33□□□□□ -1.72
LINC00396-201ENST00000411690 ATP5G3P48201 142 aa4.33□□□□□ -1.72
LINC00396-201ENST00000411690 HOXA1P49639 335 aaPredicted RBP4.33□□□□□ -1.72
LINC00396-201ENST00000411690 MFAP4P55083 255 aa4.33□□□□□ -1.72
LINC00396-201ENST00000411690 GNG2P59768 71 aa4.33□□□□□ -1.72
LINC00396-201ENST00000411690 ARPC4P59998 168 aa4.33□□□□□ -1.72
LINC00396-201ENST00000411690 WT1-ASQ06250 92 aa4.33□□□□□ -1.72
LINC00396-201ENST00000411690 DHRS2Q13268 280 aa4.33□□□□□ -1.72
LINC00396-201ENST00000411690 ESRGQ1W209 222 aa4.33□□□□□ -1.72
LINC00396-201ENST00000411690 THOC7Q6I9Y2 204 aaKnown RBP4.33□□□□□ -1.72
LINC00396-201ENST00000411690 HSD17B13Q7Z5P4 300 aaPredicted RBP4.33□□□□□ -1.72
LINC00396-201ENST00000411690 OR10R2Q8NGX6 335 aa4.33□□□□□ -1.72
LINC00396-201ENST00000411690 TCTEX1D2Q8WW35 142 aa4.33□□□□□ -1.72
LINC00396-201ENST00000411690 AP3S1Q92572 193 aa4.33□□□□□ -1.72
LINC00396-201ENST00000411690 TXN2Q99757 166 aa4.33□□□□□ -1.72
LINC00396-201ENST00000411690 C7orf50Q9BRJ6 194 aaKnown RBP4.33□□□□□ -1.72
LINC00396-201ENST00000411690 AIFM2Q9BRQ8 373 aa4.33□□□□□ -1.72
LINC00396-201ENST00000411690 QTRT1Q9BXR0 403 aaKnown RBP4.33□□□□□ -1.72
LINC00396-201ENST00000411690 ATG5Q9H1Y0 275 aa4.33□□□□□ -1.72
LINC00396-201ENST00000411690 NDUFB11Q9NX14 153 aa4.33□□□□□ -1.72
LINC00396-201ENST00000411690 SPATA2Q9UM82 520 aa4.33□□□□□ -1.72
LINC00396-201ENST00000411690 RBMX2Q9Y388 322 aaKnown RBP4.33□□□□□ -1.72
LINC00396-201ENST00000411690 MRPS16Q9Y3D3 137 aaKnown RBP4.33□□□□□ -1.72
LINC00396-201ENST00000411690 GOLT1BQ9Y3E0 138 aa4.33□□□□□ -1.72
LINC00396-201ENST00000411690 F11RQ9Y624 299 aaKnown RBP4.33□□□□□ -1.72
LINC00396-201ENST00000411690 TRAV3A0A0B4J244 114 aa4.32□□□□□ -1.72
LINC00396-201ENST00000411690 UPK2O00526 184 aa4.32□□□□□ -1.72
LINC00396-201ENST00000411690 GNG7O60262 68 aa4.32□□□□□ -1.72
LINC00396-201ENST00000411690 SCGNO76038 276 aa4.32□□□□□ -1.72
LINC00396-201ENST00000411690 SLC22A5O76082 557 aa4.32□□□□□ -1.72
LINC00396-201ENST00000411690 IGKV3-20P01619 116 aa4.32□□□□□ -1.72
LINC00396-201ENST00000411690 FCGR3AP08637 254 aa4.32□□□□□ -1.72
LINC00396-201ENST00000411690 CTXN2P0C2S0 81 aa4.32□□□□□ -1.72
LINC00396-201ENST00000411690 HIST1H1DP16402 221 aaKnown RBP4.32□□□□□ -1.72
LINC00396-201ENST00000411690 TNFSF8P32971 234 aa4.32□□□□□ -1.72
LINC00396-201ENST00000411690 P2RY1P47900 373 aa4.32□□□□□ -1.72
LINC00396-201ENST00000411690 TMEM50BP56557 158 aa4.32□□□□□ -1.72
LINC00396-201ENST00000411690 BRWD1-AS2P59051 145 aa4.32□□□□□ -1.72
LINC00396-201ENST00000411690 LSM3P62310 102 aaKnown RBP4.32□□□□□ -1.72
LINC00396-201ENST00000411690 SNRPD3P62318 126 aaKnown RBP4.32□□□□□ -1.72
LINC00396-201ENST00000411690 ASAH1Q13510 395 aa4.32□□□□□ -1.72
LINC00396-201ENST00000411690 NFE4Q86UQ8 179 aa4.32□□□□□ -1.72
LINC00396-201ENST00000411690 H1FOOQ8IZA3 346 aaPredicted RBP4.32□□□□□ -1.72
LINC00396-201ENST00000411690 MAFIPQ8WZ33 124 aa4.32□□□□□ -1.72
LINC00396-201ENST00000411690 SLC25A46Q96AG3 418 aa4.32□□□□□ -1.72
LINC00396-201ENST00000411690 GNPNAT1Q96EK6 184 aaPredicted RBP4.32□□□□□ -1.72
LINC00396-201ENST00000411690 HSD17B10Q99714 261 aaKnown RBP4.32□□□□□ -1.72
LINC00396-201ENST00000411690 LRP1Q07954 4544 aaKnown RBP4.31□□□□□ -1.72
LINC00396-201ENST00000411690 LOC100506127A0A0U1RQW1 187 aa4.31□□□□□ -1.72
LINC00396-201ENST00000411690 TRDV1A0A1B0GX56 115 aa4.31□□□□□ -1.72
LINC00396-201ENST00000411690 CBY3A6NI87 242 aa4.31□□□□□ -1.72
LINC00396-201ENST00000411690 IFITM5A6NNB3 132 aa4.31□□□□□ -1.72
LINC00396-201ENST00000411690 TMEM127O75204 238 aa4.31□□□□□ -1.72
LINC00396-201ENST00000411690 HLA-DQB1P01920 261 aa4.31□□□□□ -1.72
LINC00396-201ENST00000411690 CD37P11049 281 aa4.31□□□□□ -1.72
LINC00396-201ENST00000411690 HLA-DRB4P13762 266 aa4.31□□□□□ -1.72
LINC00396-201ENST00000411690 SDC2P34741 201 aa4.31□□□□□ -1.72
LINC00396-201ENST00000411690 QRFPP83859 136 aa4.31□□□□□ -1.72
LINC00396-201ENST00000411690 FABP5Q01469 135 aa4.31□□□□□ -1.72
LINC00396-201ENST00000411690 CDNFQ49AH0 187 aa4.31□□□□□ -1.72
LINC00396-201ENST00000411690 PLAC9Q5JTB6 97 aa4.31□□□□□ -1.72
LINC00396-201ENST00000411690 HACD4Q5VWC8 232 aa4.31□□□□□ -1.72
LINC00396-201ENST00000411690 C22orf42Q6IC83 251 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 175.5 ms