RNA–Protein interactions for RNA: ENST00000409402.8

SPIRE1-202, Transcript of spire type actin nucleation factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPIRE1, Length 5,665 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIRE1-202ENST00000409402 CNOT1A5YKK6 2376 aaKnown RBP20.65■□□□□ 0.9
SPIRE1-202ENST00000409402 RNF222A6NCQ9 220 aa20.64■□□□□ 0.9
SPIRE1-202ENST00000409402 SCGB1A1P11684 91 aa20.64■□□□□ 0.9
SPIRE1-202ENST00000409402 TRAV9-1A0A075B6T8 112 aa20.64■□□□□ 0.9
SPIRE1-202ENST00000409402 SPSB3Q6PJ21 355 aa20.64■□□□□ 0.9
SPIRE1-202ENST00000409402 PNRC2Q9NPJ4 139 aaKnown RBP20.64■□□□□ 0.9
SPIRE1-202ENST00000409402 HEATR5BQ9P2D3 2071 aa20.64■□□□□ 0.89
SPIRE1-202ENST00000409402 GAGE10A6NGK3 116 aa20.64■□□□□ 0.89
SPIRE1-202ENST00000409402 CACNG7P62955 275 aa20.64■□□□□ 0.89
SPIRE1-202ENST00000409402 ID3Q02535 119 aa20.64■□□□□ 0.89
SPIRE1-202ENST00000409402 PRR30Q53SZ7 412 aaPredicted RBP20.64■□□□□ 0.89
SPIRE1-202ENST00000409402 SDK2Q58EX2 2172 aa20.64■□□□□ 0.89
SPIRE1-202ENST00000409402 CD33P20138 364 aa20.64■□□□□ 0.89
SPIRE1-202ENST00000409402 CDX1P47902 265 aaPredicted RBP20.64■□□□□ 0.89
SPIRE1-202ENST00000409402 TMEM155Q4W5P6 130 aa20.64■□□□□ 0.89
SPIRE1-202ENST00000409402 A0A1W2PRE2 83 aa20.63■□□□□ 0.89
SPIRE1-202ENST00000409402 CCL20P78556 96 aa20.63■□□□□ 0.89
SPIRE1-202ENST00000409402 TRAV8-6A0A0B4J262 113 aa20.63■□□□□ 0.89
SPIRE1-202ENST00000409402 BUB1B-PAK6H3BSN5 160 aa20.63■□□□□ 0.89
SPIRE1-202ENST00000409402 HIGD1CA8MV81 97 aa20.63■□□□□ 0.89
SPIRE1-202ENST00000409402 TEX38Q6PEX7 206 aa20.63■□□□□ 0.89
SPIRE1-202ENST00000409402 C10orf55Q5SWW7 151 aa20.62■□□□□ 0.89
SPIRE1-202ENST00000409402 FOXC2Q99958 501 aa20.62■□□□□ 0.89
SPIRE1-202ENST00000409402 CRPP02741 224 aa20.62■□□□□ 0.89
SPIRE1-202ENST00000409402 DEFB121Q5J5C9 76 aa20.62■□□□□ 0.89
SPIRE1-202ENST00000409402 KLHDC3Q9BQ90 382 aa20.62■□□□□ 0.89
SPIRE1-202ENST00000409402 C5orf64Q2M2E5 130 aa20.62■□□□□ 0.89
SPIRE1-202ENST00000409402 GFI1Q99684 422 aa20.62■□□□□ 0.89
SPIRE1-202ENST00000409402 ERVK11-1P61568 191 aa20.62■□□□□ 0.89
SPIRE1-202ENST00000409402 GLRX5Q86SX6 157 aa20.62■□□□□ 0.89
SPIRE1-202ENST00000409402 NEUROG1Q92886 237 aa20.62■□□□□ 0.89
SPIRE1-202ENST00000409402 E7EQL1 145 aa20.61■□□□□ 0.89
SPIRE1-202ENST00000409402 ATOH7Q8N100 152 aa20.61■□□□□ 0.89
SPIRE1-202ENST00000409402 RTTNQ86VV8 2226 aa20.61■□□□□ 0.89
SPIRE1-202ENST00000409402 TRBV7-1A0A0A6YYK4 115 aa20.61■□□□□ 0.89
SPIRE1-202ENST00000409402 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP20.61■□□□□ 0.89
SPIRE1-202ENST00000409402 CNTFRP26992 372 aa20.61■□□□□ 0.89
SPIRE1-202ENST00000409402 EFNB3Q15768 340 aa20.61■□□□□ 0.89
SPIRE1-202ENST00000409402 RNF126Q9BV68 326 aa20.61■□□□□ 0.89
SPIRE1-202ENST00000409402 RNF114Q9Y508 228 aa20.6■□□□□ 0.89
SPIRE1-202ENST00000409402 UBE2DNLQ8IWF7 75 aa20.6■□□□□ 0.89
SPIRE1-202ENST00000409402 BEX4Q9NWD9 120 aaPredicted RBP20.6■□□□□ 0.89
SPIRE1-202ENST00000409402 WDR83OSQ9Y284 106 aa20.6■□□□□ 0.89
SPIRE1-202ENST00000409402 IFI27P40305 119 aaPredicted RBP20.6■□□□□ 0.89
SPIRE1-202ENST00000409402 RNF223E7ERA6 249 aa20.59■□□□□ 0.89
SPIRE1-202ENST00000409402 INTS1Q8N201 2190 aaKnown RBP20.59■□□□□ 0.89
SPIRE1-202ENST00000409402 H0YJW9 148 aa20.59■□□□□ 0.89
SPIRE1-202ENST00000409402 PLA2G2CQ5R387 149 aa20.59■□□□□ 0.89
SPIRE1-202ENST00000409402 TCF23Q7RTU1 214 aa20.59■□□□□ 0.89
SPIRE1-202ENST00000409402 PIP4P2Q8N4L2 257 aa20.59■□□□□ 0.89
SPIRE1-202ENST00000409402 USMG5Q96IX5 58 aa20.59■□□□□ 0.89
SPIRE1-202ENST00000409402 VGLL1Q99990 258 aa20.59■□□□□ 0.89
SPIRE1-202ENST00000409402 C3orf56Q8N813 242 aa20.59■□□□□ 0.89
SPIRE1-202ENST00000409402 WFDC12Q8WWY7 111 aa20.59■□□□□ 0.89
SPIRE1-202ENST00000409402 A0A1B0GWJ7 208 aa20.58■□□□□ 0.89
SPIRE1-202ENST00000409402 C1QTNF9BB2RNN3 333 aa20.58■□□□□ 0.89
SPIRE1-202ENST00000409402 J3QKU1 62 aa20.58■□□□□ 0.89
SPIRE1-202ENST00000409402 C1QTNF9P0C862 333 aa20.58■□□□□ 0.89
SPIRE1-202ENST00000409402 Q5PR19 223 aa20.58■□□□□ 0.89
SPIRE1-202ENST00000409402 IGFL3Q6UXB1 125 aa20.58■□□□□ 0.89
SPIRE1-202ENST00000409402 IMMP2LQ96T52 175 aa20.58■□□□□ 0.89
SPIRE1-202ENST00000409402 LY6HO94772 140 aa20.58■□□□□ 0.89
SPIRE1-202ENST00000409402 GATA3P23771 443 aa20.58■□□□□ 0.89
SPIRE1-202ENST00000409402 LILRA1O75019 489 aa20.58■□□□□ 0.89
SPIRE1-202ENST00000409402 KLHL30-AS1Q8NEE0 82 aa20.58■□□□□ 0.88
SPIRE1-202ENST00000409402 SOD3P08294 240 aa20.58■□□□□ 0.88
SPIRE1-202ENST00000409402 RNASE7Q9H1E1 156 aaKnown RBP20.58■□□□□ 0.88
SPIRE1-202ENST00000409402 VCX2Q9H322 139 aa20.58■□□□□ 0.88
SPIRE1-202ENST00000409402 CEP250Q9BV73 2442 aa20.57■□□□□ 0.88
SPIRE1-202ENST00000409402 SCN8AQ9UQD0 1980 aa20.57■□□□□ 0.88
SPIRE1-202ENST00000409402 ALPK2Q86TB3 2170 aa20.57■□□□□ 0.88
SPIRE1-202ENST00000409402 F8VVB4 439 aa20.57■□□□□ 0.88
SPIRE1-202ENST00000409402 F8VWA3 439 aa20.57■□□□□ 0.88
SPIRE1-202ENST00000409402 BTCP35070 178 aa20.57■□□□□ 0.88
SPIRE1-202ENST00000409402 LYPD2Q6UXB3 125 aa20.57■□□□□ 0.88
SPIRE1-202ENST00000409402 SNRNP200O75643 2136 aaKnown RBP20.57■□□□□ 0.88
SPIRE1-202ENST00000409402 TMEM183AQ8IXX5 376 aa20.57■□□□□ 0.88
SPIRE1-202ENST00000409402 IGKV1D-17A0A075B6S4 117 aa20.56■□□□□ 0.88
SPIRE1-202ENST00000409402 CARHSP1Q9Y2V2 147 aaKnown RBP20.56■□□□□ 0.88
SPIRE1-202ENST00000409402 IFITM2Q01629 132 aa20.56■□□□□ 0.88
SPIRE1-202ENST00000409402 A6NNC1 897 aa20.56■□□□□ 0.88
SPIRE1-202ENST00000409402 TMEM190Q8WZ59 177 aa20.56■□□□□ 0.88
SPIRE1-202ENST00000409402 RNF166Q96A37 237 aaPredicted RBP20.56■□□□□ 0.88
SPIRE1-202ENST00000409402 MSMBP08118 114 aa20.56■□□□□ 0.88
SPIRE1-202ENST00000409402 COL4A6Q14031 1691 aa20.56■□□□□ 0.88
SPIRE1-202ENST00000409402 RPL15P61313 204 aaKnown RBP20.56■□□□□ 0.88
SPIRE1-202ENST00000409402 LCNL1Q6ZST4 164 aa20.56■□□□□ 0.88
SPIRE1-202ENST00000409402 FAM223BA6NKX1 122 aa20.55■□□□□ 0.88
SPIRE1-202ENST00000409402 NBL1P41271 181 aa20.55■□□□□ 0.88
SPIRE1-202ENST00000409402 FAM223AQ8IWN6 122 aa20.55■□□□□ 0.88
SPIRE1-202ENST00000409402 OR9G4Q8NGQ1 327 aa20.55■□□□□ 0.88
SPIRE1-202ENST00000409402 SPTBN2O15020 2390 aa20.55■□□□□ 0.88
SPIRE1-202ENST00000409402 NAPSAO96009 420 aa20.55■□□□□ 0.88
SPIRE1-202ENST00000409402 PSG1P11464 419 aa20.55■□□□□ 0.88
SPIRE1-202ENST00000409402 ARHGEF17Q96PE2 2063 aaPredicted RBP20.55■□□□□ 0.88
SPIRE1-202ENST00000409402 ZNF98A6NK75 572 aa20.55■□□□□ 0.88
SPIRE1-202ENST00000409402 RPL23P62829 140 aaKnown RBP20.55■□□□□ 0.88
SPIRE1-202ENST00000409402 TREML4Q6UXN2 200 aa20.55■□□□□ 0.88
SPIRE1-202ENST00000409402 ZNF415Q09FC8 603 aa20.55■□□□□ 0.88
SPIRE1-202ENST00000409402 Q6P435 159 aa20.55■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms