RNA–Protein interactions for RNA: ENST00000396495.3

TNFRSF17-202, Transcript of TNF receptor superfamily member 17, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TNFRSF17, Length 668 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF17-202ENST00000396495 LINC00482Q8N8I6 264 aa3.69□□□□□ -1.82
TNFRSF17-202ENST00000396495 SPATA3Q8NHX4 192 aa3.69□□□□□ -1.82
TNFRSF17-202ENST00000396495 C2orf48Q96LS8 159 aa3.69□□□□□ -1.82
TNFRSF17-202ENST00000396495 SCGB3A2Q96PL1 93 aa3.69□□□□□ -1.82
TNFRSF17-202ENST00000396495 SHANK2-AS3Q9BTD1 123 aa3.69□□□□□ -1.82
TNFRSF17-202ENST00000396495 RPP25Q9BUL9 199 aaKnown RBP3.69□□□□□ -1.82
TNFRSF17-202ENST00000396495 APOOQ9BUR5 198 aa3.69□□□□□ -1.82
TNFRSF17-202ENST00000396495 GNB1LQ9BYB4 327 aa3.69□□□□□ -1.82
TNFRSF17-202ENST00000396495 OR10A2Q9H208 303 aa3.69□□□□□ -1.82
TNFRSF17-202ENST00000396495 CACNG5Q9UF02 275 aa3.69□□□□□ -1.82
TNFRSF17-202ENST00000396495 PILRAQ9UKJ1 303 aa3.69□□□□□ -1.82
TNFRSF17-202ENST00000396495 LSM4Q9Y4Z0 139 aaKnown RBP3.69□□□□□ -1.82
TNFRSF17-202ENST00000396495 UTRNP46939 3433 aa3.69□□□□□ -1.82
TNFRSF17-202ENST00000396495 TRBV19A0A075B6N1 114 aa3.68□□□□□ -1.82
TNFRSF17-202ENST00000396495 A0A1B0GWB2 263 aa3.68□□□□□ -1.82
TNFRSF17-202ENST00000396495 J3QRE1 110 aa3.68□□□□□ -1.82
TNFRSF17-202ENST00000396495 APCSP02743 223 aa3.68□□□□□ -1.82
TNFRSF17-202ENST00000396495 APOHP02749 345 aaPredicted RBP3.68□□□□□ -1.82
TNFRSF17-202ENST00000396495 FGF1P05230 155 aa3.68□□□□□ -1.82
TNFRSF17-202ENST00000396495 CD55P08174 381 aa3.68□□□□□ -1.82
TNFRSF17-202ENST00000396495 ZGLP1P0C6A0 271 aa3.68□□□□□ -1.82
TNFRSF17-202ENST00000396495 PYYP10082 97 aa3.68□□□□□ -1.82
TNFRSF17-202ENST00000396495 CR2P20023 1033 aa3.68□□□□□ -1.82
TNFRSF17-202ENST00000396495 DUTP33316 252 aaKnown RBP3.68□□□□□ -1.82
TNFRSF17-202ENST00000396495 UBE2G1P62253 170 aa3.68□□□□□ -1.82
TNFRSF17-202ENST00000396495 SP4Q02446 784 aa3.68□□□□□ -1.82
TNFRSF17-202ENST00000396495 LTBQ06643 244 aa3.68□□□□□ -1.82
TNFRSF17-202ENST00000396495 FOXF2Q12947 444 aa3.68□□□□□ -1.82
TNFRSF17-202ENST00000396495 SRSF9Q13242 221 aaKnown RBP eCLIP3.68□□□□□ -1.82
TNFRSF17-202ENST00000396495 ARFRP1Q13795 201 aa3.68□□□□□ -1.82
TNFRSF17-202ENST00000396495 FAM78AQ5JUQ0 283 aa3.68□□□□□ -1.82
TNFRSF17-202ENST00000396495 HIST2H2BCQ6DN03 193 aa3.68□□□□□ -1.82
TNFRSF17-202ENST00000396495 HIST2H2BDQ6DRA6 164 aa3.68□□□□□ -1.82
TNFRSF17-202ENST00000396495 TRNP1Q6NT89 227 aa3.68□□□□□ -1.82
TNFRSF17-202ENST00000396495 C22orf39Q6P5X5 142 aa3.68□□□□□ -1.82
TNFRSF17-202ENST00000396495 TMEM136Q6ZRR5 245 aa3.68□□□□□ -1.82
TNFRSF17-202ENST00000396495 MRPL55Q7Z7F7 128 aaKnown RBP3.68□□□□□ -1.82
TNFRSF17-202ENST00000396495 LINC00311Q8N616 119 aa3.68□□□□□ -1.82
TNFRSF17-202ENST00000396495 LRTM2Q8N967 370 aa3.68□□□□□ -1.82
TNFRSF17-202ENST00000396495 C11orf45Q8TAV5 145 aa3.68□□□□□ -1.82
TNFRSF17-202ENST00000396495 FAM19A4Q96LR4 140 aa3.68□□□□□ -1.82
TNFRSF17-202ENST00000396495 C2orf50Q96LR7 162 aa3.68□□□□□ -1.82
TNFRSF17-202ENST00000396495 GFI1Q99684 422 aa3.68□□□□□ -1.82
TNFRSF17-202ENST00000396495 EMC6Q9BV81 110 aa3.68□□□□□ -1.82
TNFRSF17-202ENST00000396495 KCNE3Q9Y6H6 103 aa3.68□□□□□ -1.82
TNFRSF17-202ENST00000396495 X6R8D5 127 aa3.68□□□□□ -1.82
TNFRSF17-202ENST00000396495 SCN10AQ9Y5Y9 1956 aa3.68□□□□□ -1.82
TNFRSF17-202ENST00000396495 MGAMO43451 1857 aa3.68□□□□□ -1.82
TNFRSF17-202ENST00000396495 NUP205Q92621 2012 aa3.68□□□□□ -1.82
TNFRSF17-202ENST00000396495 TDRD15B5MCY1 1934 aaKnown RBP3.68□□□□□ -1.82
TNFRSF17-202ENST00000396495 SMIM26A0A096LP01 95 aa3.67□□□□□ -1.82
TNFRSF17-202ENST00000396495 TRAV13-1A0A0B4J241 112 aa3.67□□□□□ -1.82
TNFRSF17-202ENST00000396495 SRRM4A7MD48 611 aaKnown RBP3.67□□□□□ -1.82
TNFRSF17-202ENST00000396495 K7EQS6 105 aa3.67□□□□□ -1.82
TNFRSF17-202ENST00000396495 M0QYG6 137 aa3.67□□□□□ -1.82
TNFRSF17-202ENST00000396495 BUB3O43684 328 aa3.67□□□□□ -1.82
TNFRSF17-202ENST00000396495 OR1I1O60431 355 aa3.67□□□□□ -1.82
TNFRSF17-202ENST00000396495 NDUFS7O75251 213 aa3.67□□□□□ -1.82
TNFRSF17-202ENST00000396495 NDUFB2O95178 105 aa3.67□□□□□ -1.82
TNFRSF17-202ENST00000396495 CPSF4O95639 269 aaKnown RBP3.67□□□□□ -1.82
TNFRSF17-202ENST00000396495 NUDT14O95848 222 aa3.67□□□□□ -1.82
TNFRSF17-202ENST00000396495 TRACP01848 142 aa3.67□□□□□ -1.82
TNFRSF17-202ENST00000396495 CXCL8P10145 99 aa3.67□□□□□ -1.82
TNFRSF17-202ENST00000396495 CD59P13987 128 aa3.67□□□□□ -1.82
TNFRSF17-202ENST00000396495 RPL23P62829 140 aaKnown RBP3.67□□□□□ -1.82
TNFRSF17-202ENST00000396495 CDK5R1Q15078 307 aa3.67□□□□□ -1.82
TNFRSF17-202ENST00000396495 BEAN1Q3B7T3 259 aa3.67□□□□□ -1.82
TNFRSF17-202ENST00000396495 SYT14P1Q58G82 188 aa3.67□□□□□ -1.82
TNFRSF17-202ENST00000396495 NCBP2-AS2Q69YL0 99 aa3.67□□□□□ -1.82
TNFRSF17-202ENST00000396495 PARM1Q6UWI2 310 aa3.67□□□□□ -1.82
TNFRSF17-202ENST00000396495 GTSCR1Q86UQ5 136 aa3.67□□□□□ -1.82
TNFRSF17-202ENST00000396495 BAGE3Q86Y29 109 aa3.67□□□□□ -1.82
TNFRSF17-202ENST00000396495 BAGE2Q86Y30 109 aa3.67□□□□□ -1.82
TNFRSF17-202ENST00000396495 ZNF645Q8N7E2 425 aa3.67□□□□□ -1.82
TNFRSF17-202ENST00000396495 LMX1AQ8TE12 382 aa3.67□□□□□ -1.82
TNFRSF17-202ENST00000396495 DNAJA3Q96EY1 480 aa3.67□□□□□ -1.82
TNFRSF17-202ENST00000396495 TMEM147Q9BVK8 224 aa3.67□□□□□ -1.82
TNFRSF17-202ENST00000396495 SRXN1Q9BYN0 137 aa3.67□□□□□ -1.82
TNFRSF17-202ENST00000396495 PARP12Q9H0J9 701 aaKnown RBP3.67□□□□□ -1.82
TNFRSF17-202ENST00000396495 TNFRSF12AQ9NP84 129 aa3.67□□□□□ -1.82
TNFRSF17-202ENST00000396495 TAAR2Q9P1P5 351 aa3.67□□□□□ -1.82
TNFRSF17-202ENST00000396495 TIMM13Q9Y5L4 95 aaPredicted RBP3.67□□□□□ -1.82
TNFRSF17-202ENST00000396495 SERP1Q9Y6X1 66 aa3.67□□□□□ -1.82
TNFRSF17-202ENST00000396495 CASP8AP2Q9UKL3 1982 aa3.67□□□□□ -1.82
TNFRSF17-202ENST00000396495 SCN5AQ14524 2016 aa3.66□□□□□ -1.82
TNFRSF17-202ENST00000396495 RBAKDNA6NC62 111 aa3.66□□□□□ -1.82
TNFRSF17-202ENST00000396495 A8MWL6 223 aa3.66□□□□□ -1.82
TNFRSF17-202ENST00000396495 IGLL5B9A064 214 aa3.66□□□□□ -1.82
TNFRSF17-202ENST00000396495 K7EMT4 169 aa3.66□□□□□ -1.82
TNFRSF17-202ENST00000396495 SDCBPO00560 298 aaPredicted RBP3.66□□□□□ -1.82
TNFRSF17-202ENST00000396495 DEDDO75618 318 aa3.66□□□□□ -1.82
TNFRSF17-202ENST00000396495 P01737 135 aa3.66□□□□□ -1.82
TNFRSF17-202ENST00000396495 HLA-DRB4P13762 266 aa3.66□□□□□ -1.82
TNFRSF17-202ENST00000396495 FCGR2CP31995 323 aa3.66□□□□□ -1.82
TNFRSF17-202ENST00000396495 MTPNP58546 118 aa3.66□□□□□ -1.82
TNFRSF17-202ENST00000396495 RPS11P62280 158 aaKnown RBP eCLIP3.66□□□□□ -1.82
TNFRSF17-202ENST00000396495 HIST1H4AP62805 103 aaKnown RBP3.66□□□□□ -1.82
TNFRSF17-202ENST00000396495 CCL20P78556 96 aa3.66□□□□□ -1.82
TNFRSF17-202ENST00000396495 DPTQ07507 201 aa3.66□□□□□ -1.82
TNFRSF17-202ENST00000396495 TMEM187Q14656 261 aa3.66□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms