RNA–Protein interactions for RNA: ENST00000390497.1

TRAJ40-201, Transcript of T cell receptor alpha joining 40, humanhuman

APPRIS P1 BASIC

Gene TRAJ40, Length 61 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ40-201ENST00000390497 UBBP0CG47 229 aa1.14□□□□□ -2.23
TRAJ40-201ENST00000390497 MIFP14174 115 aa1.14□□□□□ -2.23
TRAJ40-201ENST00000390497 IL9P15248 144 aa1.14□□□□□ -2.23
TRAJ40-201ENST00000390497 SPI1P17947 270 aa1.14□□□□□ -2.23
TRAJ40-201ENST00000390497 FKBP2P26885 142 aaKnown RBP1.14□□□□□ -2.23
TRAJ40-201ENST00000390497 SRP14P37108 136 aaKnown RBP1.14□□□□□ -2.23
TRAJ40-201ENST00000390497 ATP5G3P48201 142 aa1.14□□□□□ -2.23
TRAJ40-201ENST00000390497 EIF5AP63241 154 aaKnown RBP1.14□□□□□ -2.23
TRAJ40-201ENST00000390497 C10orf55Q5SWW7 151 aa1.14□□□□□ -2.23
TRAJ40-201ENST00000390497 Q6ZQT0 140 aa1.14□□□□□ -2.23
TRAJ40-201ENST00000390497 S100A7AQ86SG5 101 aa1.14□□□□□ -2.23
TRAJ40-201ENST00000390497 OR8D4Q8NGM9 314 aa1.14□□□□□ -2.23
TRAJ40-201ENST00000390497 TEX47Q8TBZ9 253 aa1.14□□□□□ -2.23
TRAJ40-201ENST00000390497 SLC50A1Q9BRV3 221 aa1.14□□□□□ -2.23
TRAJ40-201ENST00000390497 LYRM2Q9NU23 88 aaPredicted RBP1.14□□□□□ -2.23
TRAJ40-201ENST00000390497 HS3ST2Q9Y278 367 aa1.14□□□□□ -2.23
TRAJ40-201ENST00000390497 MAST2Q6P0Q8 1798 aa1.13□□□□□ -2.23
TRAJ40-201ENST00000390497 COL4A1P02462 1669 aa1.13□□□□□ -2.23
TRAJ40-201ENST00000390497 IGKV1D-42A0A075B6H8 117 aa1.13□□□□□ -2.23
TRAJ40-201ENST00000390497 IGKV1-9A0A0C4DH69 117 aa1.13□□□□□ -2.23
TRAJ40-201ENST00000390497 IFNA1P01562 189 aa1.13□□□□□ -2.23
TRAJ40-201ENST00000390497 APOA2P02652 100 aa1.13□□□□□ -2.23
TRAJ40-201ENST00000390497 C1QBP02746 253 aa1.13□□□□□ -2.23
TRAJ40-201ENST00000390497 CRYGAP11844 174 aa1.13□□□□□ -2.23
TRAJ40-201ENST00000390497 SERPINB9P50453 376 aa1.13□□□□□ -2.23
TRAJ40-201ENST00000390497 RHOGP84095 191 aa1.13□□□□□ -2.23
TRAJ40-201ENST00000390497 ZNF846Q147U1 533 aa1.13□□□□□ -2.23
TRAJ40-201ENST00000390497 RRN3P1Q2M238 152 aa1.13□□□□□ -2.23
TRAJ40-201ENST00000390497 SCGB2B2Q4G0G5 96 aa1.13□□□□□ -2.23
TRAJ40-201ENST00000390497 LYG2Q86SG7 212 aa1.13□□□□□ -2.23
TRAJ40-201ENST00000390497 OR13D1Q8NGV5 346 aa1.13□□□□□ -2.23
TRAJ40-201ENST00000390497 OR4C6Q8NH72 309 aa1.13□□□□□ -2.23
TRAJ40-201ENST00000390497 OR13C6PQ8NH95 151 aa1.13□□□□□ -2.23
TRAJ40-201ENST00000390497 Q96M85 177 aa1.13□□□□□ -2.23
TRAJ40-201ENST00000390497 PRRT1Q99946 306 aa1.13□□□□□ -2.23
TRAJ40-201ENST00000390497 ADAT1Q9BUB4 502 aaKnown RBP1.13□□□□□ -2.23
TRAJ40-201ENST00000390497 MRPL32Q9BYC8 188 aaKnown RBP1.13□□□□□ -2.23
TRAJ40-201ENST00000390497 SOX21Q9Y651 276 aaPredicted RBP1.13□□□□□ -2.23
TRAJ40-201ENST00000390497 UHRF1BP1Q6BDS2 1440 aa1.13□□□□□ -2.23
TRAJ40-201ENST00000390497 PTPRSQ13332 1948 aa1.13□□□□□ -2.23
TRAJ40-201ENST00000390497 TRAV14DV4A0A0A6YYC5 116 aa1.12□□□□□ -2.23
TRAJ40-201ENST00000390497 CLDN25C9JDP6 229 aa1.12□□□□□ -2.23
TRAJ40-201ENST00000390497 BRS3P32247 399 aa1.12□□□□□ -2.23
TRAJ40-201ENST00000390497 NCALDP61601 193 aa1.12□□□□□ -2.23
TRAJ40-201ENST00000390497 MYL5Q02045 173 aa1.12□□□□□ -2.23
TRAJ40-201ENST00000390497 AKR1C8PQ5T2L2 129 aa1.12□□□□□ -2.23
TRAJ40-201ENST00000390497 C22orf39Q6P5X5 142 aa1.12□□□□□ -2.23
TRAJ40-201ENST00000390497 OR10J5Q8NHC4 309 aa1.12□□□□□ -2.23
TRAJ40-201ENST00000390497 CANT1Q8WVQ1 401 aa1.12□□□□□ -2.23
TRAJ40-201ENST00000390497 AQP3Q92482 292 aa1.12□□□□□ -2.23
TRAJ40-201ENST00000390497 ADAT3Q96EY9 351 aaPredicted RBP1.12□□□□□ -2.23
TRAJ40-201ENST00000390497 GINS3Q9BRX5 216 aa1.12□□□□□ -2.23
TRAJ40-201ENST00000390497 SH3BGRL3Q9H299 93 aa1.12□□□□□ -2.23
TRAJ40-201ENST00000390497 C14orf132Q9NPU4 83 aa1.12□□□□□ -2.23
TRAJ40-201ENST00000390497 AMMECR1Q9Y4X0 333 aaPredicted RBP1.12□□□□□ -2.23
TRAJ40-201ENST00000390497 KIF1BO60333 1816 aa1.12□□□□□ -2.23
TRAJ40-201ENST00000390497 ICE1Q9Y2F5 2266 aa1.12□□□□□ -2.23
TRAJ40-201ENST00000390497 CPAMD8Q8IZJ3 1885 aa1.12□□□□□ -2.23
TRAJ40-201ENST00000390497 IGKV2-40A0A087WW87 121 aaPredicted RBP1.11□□□□□ -2.23
TRAJ40-201ENST00000390497 IGKV3D-7A0A0C4DH55 119 aa1.11□□□□□ -2.23
TRAJ40-201ENST00000390497 IGKV3OR2-268A0A0C4DH90 116 aa1.11□□□□□ -2.23
TRAJ40-201ENST00000390497 H7C1C5 153 aa1.11□□□□□ -2.23
TRAJ40-201ENST00000390497 OR2T1O43869 369 aa1.11□□□□□ -2.23
TRAJ40-201ENST00000390497 OR1I1O60431 355 aa1.11□□□□□ -2.23
TRAJ40-201ENST00000390497 BANF1O75531 89 aa1.11□□□□□ -2.23
TRAJ40-201ENST00000390497 UBL3O95164 117 aa1.11□□□□□ -2.23
TRAJ40-201ENST00000390497 IGKV2D-40P01614 121 aaPredicted RBP1.11□□□□□ -2.23
TRAJ40-201ENST00000390497 SRIP30626 198 aa1.11□□□□□ -2.23
TRAJ40-201ENST00000390497 PHBP35232 272 aa1.11□□□□□ -2.23
TRAJ40-201ENST00000390497 TCTAP57738 103 aa1.11□□□□□ -2.23
TRAJ40-201ENST00000390497 DEFA3P59666 94 aa1.11□□□□□ -2.23
TRAJ40-201ENST00000390497 LCN6P62502 163 aa1.11□□□□□ -2.23
TRAJ40-201ENST00000390497 UBE2BP63146 152 aa1.11□□□□□ -2.23
TRAJ40-201ENST00000390497 PDE6HQ13956 83 aa1.11□□□□□ -2.23
TRAJ40-201ENST00000390497 BRMS1LQ5PSV4 323 aa1.11□□□□□ -2.23
TRAJ40-201ENST00000390497 LINC00311Q8N616 119 aa1.11□□□□□ -2.23
TRAJ40-201ENST00000390497 LINC00301Q8NCQ3 95 aa1.11□□□□□ -2.23
TRAJ40-201ENST00000390497 SLC30A7Q8NEW0 376 aa1.11□□□□□ -2.23
TRAJ40-201ENST00000390497 OR52R1Q8NGF1 315 aa1.11□□□□□ -2.23
TRAJ40-201ENST00000390497 WFDC5Q8TCV5 224 aa1.11□□□□□ -2.23
TRAJ40-201ENST00000390497 SLAMF6Q96DU3 332 aa1.11□□□□□ -2.23
TRAJ40-201ENST00000390497 MALSU1Q96EH3 234 aa1.11□□□□□ -2.23
TRAJ40-201ENST00000390497 PBDC1Q9BVG4 233 aa1.11□□□□□ -2.23
TRAJ40-201ENST00000390497 PBOV1Q9GZY1 135 aa1.11□□□□□ -2.23
TRAJ40-201ENST00000390497 ACER3Q9NUN7 267 aa1.11□□□□□ -2.23
TRAJ40-201ENST00000390497 PRNDQ9UKY0 176 aa1.11□□□□□ -2.23
TRAJ40-201ENST00000390497 SSR3Q9UNL2 185 aa1.11□□□□□ -2.23
TRAJ40-201ENST00000390497 YTHDC2Q9H6S0 1430 aaKnown RBP1.11□□□□□ -2.23
TRAJ40-201ENST00000390497 CAMSAP2Q08AD1 1489 aa1.11□□□□□ -2.23
TRAJ40-201ENST00000390497 RIMBP3CA6NJZ7 1639 aa1.11□□□□□ -2.23
TRAJ40-201ENST00000390497 RIMBP3BA6NNM3 1639 aa1.11□□□□□ -2.23
TRAJ40-201ENST00000390497 RIMBP3Q9UFD9 1639 aa1.11□□□□□ -2.23
TRAJ40-201ENST00000390497 CUL9Q8IWT3 2517 aa1.1□□□□□ -2.23
TRAJ40-201ENST00000390497 TRAV1-1A0A0B4J248 108 aa1.1□□□□□ -2.23
TRAJ40-201ENST00000390497 MGST1P10620 155 aaKnown RBP1.1□□□□□ -2.23
TRAJ40-201ENST00000390497 RNASE4P34096 147 aaKnown RBP1.1□□□□□ -2.23
TRAJ40-201ENST00000390497 ESRGQ1W209 222 aa1.1□□□□□ -2.23
TRAJ40-201ENST00000390497 UNQ6190/PRO20217Q6UXQ8 127 aa1.1□□□□□ -2.23
TRAJ40-201ENST00000390497 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP1.1□□□□□ -2.23
TRAJ40-201ENST00000390497 STX12Q86Y82 276 aa1.1□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms