RNA–Protein interactions for RNA: ENST00000332682.8

TRIM49B-201, Transcript of tripartite motif containing 49B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM49B, Length 1,534 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49B-201ENST00000332682 ELLP55199 621 aaPredicted RBP9.39□□□□□ -0.91
TRIM49B-201ENST00000332682 SLC35B1P78383 322 aa9.39□□□□□ -0.91
TRIM49B-201ENST00000332682 PRR20EP86478 221 aa9.39□□□□□ -0.91
TRIM49B-201ENST00000332682 PRR20CP86479 221 aa9.39□□□□□ -0.91
TRIM49B-201ENST00000332682 PRR20DP86480 221 aa9.39□□□□□ -0.91
TRIM49B-201ENST00000332682 PRR20BP86481 221 aa9.39□□□□□ -0.91
TRIM49B-201ENST00000332682 PRR20AP86496 221 aa9.39□□□□□ -0.91
TRIM49B-201ENST00000332682 MIC13Q5XKP0 118 aa9.39□□□□□ -0.91
TRIM49B-201ENST00000332682 LCNL1Q6ZST4 164 aa9.39□□□□□ -0.91
TRIM49B-201ENST00000332682 CYP2G1PQ6ZSU1 146 aa9.39□□□□□ -0.91
TRIM49B-201ENST00000332682 STPG3Q8N7X2 389 aa9.39□□□□□ -0.91
TRIM49B-201ENST00000332682 EEF1AKMT3Q96AZ1 226 aa9.39□□□□□ -0.91
TRIM49B-201ENST00000332682 TRGV9Q99603 122 aa9.39□□□□□ -0.91
TRIM49B-201ENST00000332682 KCNIP2Q9NS61 270 aa9.39□□□□□ -0.91
TRIM49B-201ENST00000332682 PXMP4Q9Y6I8 212 aa9.39□□□□□ -0.91
TRIM49B-201ENST00000332682 UMAD1C9J7I0 102 aa9.38□□□□□ -0.91
TRIM49B-201ENST00000332682 GNG7O60262 68 aa9.38□□□□□ -0.91
TRIM49B-201ENST00000332682 IGKV1-17P01599 117 aa9.38□□□□□ -0.91
TRIM49B-201ENST00000332682 RPL29P47914 159 aaKnown RBP9.38□□□□□ -0.91
TRIM49B-201ENST00000332682 RAB9AP51151 201 aa9.38□□□□□ -0.91
TRIM49B-201ENST00000332682 B2MP61769 119 aa9.38□□□□□ -0.91
TRIM49B-201ENST00000332682 ZNF90Q03938 601 aa9.38□□□□□ -0.91
TRIM49B-201ENST00000332682 ATP5G2Q06055 141 aa9.38□□□□□ -0.91
TRIM49B-201ENST00000332682 Q56UQ5 140 aa9.38□□□□□ -0.91
TRIM49B-201ENST00000332682 FFAR4Q5NUL3 377 aa9.38□□□□□ -0.91
TRIM49B-201ENST00000332682 AKR1C8PQ5T2L2 129 aa9.38□□□□□ -0.91
TRIM49B-201ENST00000332682 TEX38Q6PEX7 206 aa9.38□□□□□ -0.91
TRIM49B-201ENST00000332682 BPIFCQ8NFQ6 507 aa9.38□□□□□ -0.91
TRIM49B-201ENST00000332682 RNF141Q8WVD5 230 aa9.38□□□□□ -0.91
TRIM49B-201ENST00000332682 PCNPQ8WW12 178 aaKnown RBP9.38□□□□□ -0.91
TRIM49B-201ENST00000332682 USMG5Q96IX5 58 aa9.38□□□□□ -0.91
TRIM49B-201ENST00000332682 TXN2Q99757 166 aa9.38□□□□□ -0.91
TRIM49B-201ENST00000332682 C16orf95Q9H693 158 aa9.38□□□□□ -0.91
TRIM49B-201ENST00000332682 VSIRQ9H7M9 311 aa9.38□□□□□ -0.91
TRIM49B-201ENST00000332682 TRBV7-1A0A0A6YYK4 115 aa9.37□□□□□ -0.91
TRIM49B-201ENST00000332682 OR2T8A6NH00 312 aa9.37□□□□□ -0.91
TRIM49B-201ENST00000332682 YIF1AO95070 293 aa9.37□□□□□ -0.91
TRIM49B-201ENST00000332682 NDUFA7O95182 113 aa9.37□□□□□ -0.91
TRIM49B-201ENST00000332682 TSPAN15O95858 294 aa9.37□□□□□ -0.91
TRIM49B-201ENST00000332682 NMBP08949 121 aa9.37□□□□□ -0.91
TRIM49B-201ENST00000332682 LINC00869P0C866 280 aa9.37□□□□□ -0.91
TRIM49B-201ENST00000332682 GATA2P23769 480 aaPredicted RBP9.37□□□□□ -0.91
TRIM49B-201ENST00000332682 FHITP49789 147 aa9.37□□□□□ -0.91
TRIM49B-201ENST00000332682 RAB5CP51148 216 aa9.37□□□□□ -0.91
TRIM49B-201ENST00000332682 FOXE3Q13461 319 aa9.37□□□□□ -0.91
TRIM49B-201ENST00000332682 TIGITQ495A1 244 aa9.37□□□□□ -0.91
TRIM49B-201ENST00000332682 MYOZ3Q8TDC0 251 aa9.37□□□□□ -0.91
TRIM49B-201ENST00000332682 SLC39A9Q9NUM3 307 aa9.37□□□□□ -0.91
TRIM49B-201ENST00000332682 C2CD3Q4AC94 2353 aa9.37□□□□□ -0.91
TRIM49B-201ENST00000332682 TRAV30A0A087WSZ9 112 aa9.36□□□□□ -0.91
TRIM49B-201ENST00000332682 A0A0G2JLM5 398 aa9.36□□□□□ -0.91
TRIM49B-201ENST00000332682 ELANEP08246 267 aa9.36□□□□□ -0.91
TRIM49B-201ENST00000332682 CTSGP08311 255 aa9.36□□□□□ -0.91
TRIM49B-201ENST00000332682 GPR183P32249 361 aa9.36□□□□□ -0.91
TRIM49B-201ENST00000332682 RAB2AP61019 212 aa9.36□□□□□ -0.91
TRIM49B-201ENST00000332682 SELENOTP62341 195 aa9.36□□□□□ -0.91
TRIM49B-201ENST00000332682 SRSF2Q01130 221 aaKnown RBP9.36□□□□□ -0.91
TRIM49B-201ENST00000332682 KIAA0141Q14154 515 aaPredicted RBP9.36□□□□□ -0.91
TRIM49B-201ENST00000332682 TMEM41BQ5BJD5 291 aa9.36□□□□□ -0.91
TRIM49B-201ENST00000332682 GCSAMLQ5JQS6 135 aa9.36□□□□□ -0.91
TRIM49B-201ENST00000332682 KLHDC1Q8N7A1 406 aa9.36□□□□□ -0.91
TRIM49B-201ENST00000332682 RNF152Q8N8N0 203 aa9.36□□□□□ -0.91
TRIM49B-201ENST00000332682 LINC01006Q8NI28 216 aa9.36□□□□□ -0.91
TRIM49B-201ENST00000332682 WIPF2Q8TF74 440 aaPredicted RBP9.36□□□□□ -0.91
TRIM49B-201ENST00000332682 ATP6V0BQ99437 205 aa9.36□□□□□ -0.91
TRIM49B-201ENST00000332682 RPRMQ9NS64 109 aa9.36□□□□□ -0.91
TRIM49B-201ENST00000332682 ZNF705EA8MWA4 302 aaPredicted RBP9.36□□□□□ -0.91
TRIM49B-201ENST00000332682 RPLP1P05386 114 aaKnown RBP9.36□□□□□ -0.91
TRIM49B-201ENST00000332682 CLEC3BP05452 202 aa9.36□□□□□ -0.91
TRIM49B-201ENST00000332682 M6PRP20645 277 aa9.36□□□□□ -0.91
TRIM49B-201ENST00000332682 ADMP35318 185 aa9.36□□□□□ -0.91
TRIM49B-201ENST00000332682 YPEL3P61236 119 aaPredicted RBP9.36□□□□□ -0.91
TRIM49B-201ENST00000332682 CLLU1Q5K131 121 aa9.36□□□□□ -0.91
TRIM49B-201ENST00000332682 CLEC19AQ6UXS0 136 aa9.36□□□□□ -0.91
TRIM49B-201ENST00000332682 DPPA3Q6W0C5 159 aa9.36□□□□□ -0.91
TRIM49B-201ENST00000332682 CHRDL1Q9BU40 450 aa9.36□□□□□ -0.91
TRIM49B-201ENST00000332682 GAR1Q9NY12 217 aaKnown RBP9.36□□□□□ -0.91
TRIM49B-201ENST00000332682 SETD2Q9BYW2 2564 aaPredicted RBP9.35□□□□□ -0.91
TRIM49B-201ENST00000332682 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.35□□□□□ -0.91
TRIM49B-201ENST00000332682 NUPL2O15504 423 aaKnown RBP9.35□□□□□ -0.91
TRIM49B-201ENST00000332682 SCGB2A1O75556 95 aa9.35□□□□□ -0.91
TRIM49B-201ENST00000332682 TOMM40O96008 361 aa9.35□□□□□ -0.91
TRIM49B-201ENST00000332682 IGHV3-11P01762 117 aa9.35□□□□□ -0.91
TRIM49B-201ENST00000332682 MBP02144 154 aa9.35□□□□□ -0.91
TRIM49B-201ENST00000332682 FABP1P07148 127 aa9.35□□□□□ -0.91
TRIM49B-201ENST00000332682 PSG1P11464 419 aa9.35□□□□□ -0.91
TRIM49B-201ENST00000332682 RAB14P61106 215 aa9.35□□□□□ -0.91
TRIM49B-201ENST00000332682 ZNF616Q08AN1 781 aa9.35□□□□□ -0.91
TRIM49B-201ENST00000332682 ACOT6Q3I5F7 207 aaPredicted RBP9.35□□□□□ -0.91
TRIM49B-201ENST00000332682 ZNF343Q6P1L6 599 aa9.35□□□□□ -0.91
TRIM49B-201ENST00000332682 Q6ZRG5 221 aa9.35□□□□□ -0.91
TRIM49B-201ENST00000332682 RPP25LQ8N5L8 163 aaKnown RBP9.35□□□□□ -0.91
TRIM49B-201ENST00000332682 COMMD1Q8N668 190 aa9.35□□□□□ -0.91
TRIM49B-201ENST00000332682 OR10G4Q8NGN3 311 aa9.35□□□□□ -0.91
TRIM49B-201ENST00000332682 OR10G9Q8NGN4 311 aa9.35□□□□□ -0.91
TRIM49B-201ENST00000332682 OR10G7Q8NGN6 311 aa9.35□□□□□ -0.91
TRIM49B-201ENST00000332682 FAM213BQ8TBF2 198 aa9.35□□□□□ -0.91
TRIM49B-201ENST00000332682 LRRC20Q8TCA0 184 aa9.35□□□□□ -0.91
TRIM49B-201ENST00000332682 SAT2Q96F10 170 aaPredicted RBP9.35□□□□□ -0.91
TRIM49B-201ENST00000332682 RCC1LQ96I51 464 aaKnown RBP9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms