RNA–Protein interactions for RNA: ENST00000311943.11

SCFD1-201, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 2,016 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-201ENST00000311943 DAZ1Q9NQZ3 744 aaKnown RBP9.02□□□□□ -0.97
SCFD1-201ENST00000311943 RCL1Q9Y2P8 373 aaKnown RBP9.02□□□□□ -0.97
SCFD1-201ENST00000311943 SMAD5-AS1Q9Y6J3 95 aa9.02□□□□□ -0.97
SCFD1-201ENST00000311943 PRSS46E5RG02 174 aa9.02□□□□□ -0.97
SCFD1-201ENST00000311943 CHEK1O14757 476 aa9.02□□□□□ -0.97
SCFD1-201ENST00000311943 MBPP02686 304 aaPredicted RBP9.02□□□□□ -0.97
SCFD1-201ENST00000311943 CD81P60033 236 aa9.02□□□□□ -0.97
SCFD1-201ENST00000311943 ARL16Q0P5N6 197 aa9.02□□□□□ -0.97
SCFD1-201ENST00000311943 USF2Q15853 346 aaPredicted RBP9.02□□□□□ -0.97
SCFD1-201ENST00000311943 ZBTB8BQ8NAP8 495 aaPredicted RBP9.02□□□□□ -0.97
SCFD1-201ENST00000311943 ENKURQ8TC29 256 aa9.02□□□□□ -0.97
SCFD1-201ENST00000311943 RHPN1-AS1Q9BWJ2 59 aa9.02□□□□□ -0.97
SCFD1-201ENST00000311943 C19orf73Q9NVV2 129 aa9.02□□□□□ -0.97
SCFD1-201ENST00000311943 NKX2-1P43699 371 aaPredicted RBP9.01□□□□□ -0.97
SCFD1-201ENST00000311943 NPBWR1P48145 328 aa9.01□□□□□ -0.97
SCFD1-201ENST00000311943 C12orf45Q8N5I9 185 aaPredicted RBP9.01□□□□□ -0.97
SCFD1-201ENST00000311943 FAM24BQ8N5W8 94 aa9.01□□□□□ -0.97
SCFD1-201ENST00000311943 TXN2Q99757 166 aa9.01□□□□□ -0.97
SCFD1-201ENST00000311943 SMPXQ9UHP9 88 aa9.01□□□□□ -0.97
SCFD1-201ENST00000311943 UFC1Q9Y3C8 167 aa9.01□□□□□ -0.97
SCFD1-201ENST00000311943 U3KQ87 197 aa9.01□□□□□ -0.97
SCFD1-201ENST00000311943 IGHV7-4-1A0A0J9YVY3 117 aa9□□□□□ -0.97
SCFD1-201ENST00000311943 PMS2P5A8MQ11 134 aa9□□□□□ -0.97
SCFD1-201ENST00000311943 DFFBO76075 338 aa9□□□□□ -0.97
SCFD1-201ENST00000311943 SLC25A6P12236 298 aa9□□□□□ -0.97
SCFD1-201ENST00000311943 OR10J1P30954 320 aa9□□□□□ -0.97
SCFD1-201ENST00000311943 OR2F1Q13607 317 aa9□□□□□ -0.97
SCFD1-201ENST00000311943 LCN12Q6JVE5 192 aa9□□□□□ -0.97
SCFD1-201ENST00000311943 MZT2BQ6NZ67 158 aa9□□□□□ -0.97
SCFD1-201ENST00000311943 WFDC3Q8IUB2 231 aa9□□□□□ -0.97
SCFD1-201ENST00000311943 STPG3Q8N7X2 389 aa9□□□□□ -0.97
SCFD1-201ENST00000311943 RNASEH2CQ8TDP1 164 aaKnown RBP9□□□□□ -0.97
SCFD1-201ENST00000311943 NEURL2Q9BR09 285 aa9□□□□□ -0.97
SCFD1-201ENST00000311943 RETNQ9HD89 108 aa9□□□□□ -0.97
SCFD1-201ENST00000311943 MRPL27Q9P0M9 148 aaKnown RBP9□□□□□ -0.97
SCFD1-201ENST00000311943 TRAV14DV4A0A0A6YYC5 116 aa9□□□□□ -0.97
SCFD1-201ENST00000311943 C7orf66A4D0T2 115 aa9□□□□□ -0.97
SCFD1-201ENST00000311943 CORTO00230 105 aa9□□□□□ -0.97
SCFD1-201ENST00000311943 METTL15P1P0C7V9 234 aa9□□□□□ -0.97
SCFD1-201ENST00000311943 RRAS2P62070 204 aaPredicted RBP9□□□□□ -0.97
SCFD1-201ENST00000311943 OR8G2PQ6IF36 304 aa9□□□□□ -0.97
SCFD1-201ENST00000311943 ZNF600Q6ZNG1 722 aa9□□□□□ -0.97
SCFD1-201ENST00000311943 TMEM116Q8NCL8 245 aa9□□□□□ -0.97
SCFD1-201ENST00000311943 B9D2Q9BPU9 175 aa9□□□□□ -0.97
SCFD1-201ENST00000311943 PSENENQ9NZ42 101 aa9□□□□□ -0.97
SCFD1-201ENST00000311943 LSM5Q9Y4Y9 91 aaKnown RBP9□□□□□ -0.97
SCFD1-201ENST00000311943 C5orf51A6NDU8 294 aa8.99□□□□□ -0.97
SCFD1-201ENST00000311943 IFNA21P01568 189 aa8.99□□□□□ -0.97
SCFD1-201ENST00000311943 PSG1P11464 419 aa8.99□□□□□ -0.97
SCFD1-201ENST00000311943 RELQ04864 619 aaPredicted RBP8.99□□□□□ -0.97
SCFD1-201ENST00000311943 RBMY1BA6NDE4 496 aaKnown RBP8.98□□□□□ -0.97
SCFD1-201ENST00000311943 RBMY1EA6NEQ0 496 aaKnown RBP8.98□□□□□ -0.97
SCFD1-201ENST00000311943 INMT-MINDY4F8WBC2 141 aa8.98□□□□□ -0.97
SCFD1-201ENST00000311943 RBMY1DP0C7P1 496 aaKnown RBP8.98□□□□□ -0.97
SCFD1-201ENST00000311943 PRB4P10163 310 aaPredicted RBP8.98□□□□□ -0.97
SCFD1-201ENST00000311943 ACOT7LQ6ZUV0 252 aa8.98□□□□□ -0.97
SCFD1-201ENST00000311943 APRG1Q8IVJ8 170 aa8.98□□□□□ -0.97
SCFD1-201ENST00000311943 OR51G1Q8NGK1 321 aa8.98□□□□□ -0.97
SCFD1-201ENST00000311943 PALMDQ9NP74 551 aa8.98□□□□□ -0.97
SCFD1-201ENST00000311943 OR11H12B2RN74 326 aa8.98□□□□□ -0.97
SCFD1-201ENST00000311943 K7EMT4 169 aa8.98□□□□□ -0.97
SCFD1-201ENST00000311943 K7EPK0 472 aa8.98□□□□□ -0.97
SCFD1-201ENST00000311943 IL4P05112 153 aa8.98□□□□□ -0.97
SCFD1-201ENST00000311943 RAB32Q13637 225 aa8.98□□□□□ -0.97
SCFD1-201ENST00000311943 ODF3L2Q3SX64 289 aa8.98□□□□□ -0.97
SCFD1-201ENST00000311943 FAM90A2PQ658T7 463 aa8.98□□□□□ -0.97
SCFD1-201ENST00000311943 RBPMS2Q6ZRY4 209 aaKnown RBP8.98□□□□□ -0.97
SCFD1-201ENST00000311943 FAM24AA6NFZ4 105 aa8.97□□□□□ -0.97
SCFD1-201ENST00000311943 ZFP92A6NM28 416 aa8.97□□□□□ -0.97
SCFD1-201ENST00000311943 FAM90A26D6RGX4 464 aa8.97□□□□□ -0.97
SCFD1-201ENST00000311943 GOSR2O14653 212 aa8.97□□□□□ -0.97
SCFD1-201ENST00000311943 ELLP55199 621 aaPredicted RBP8.97□□□□□ -0.97
SCFD1-201ENST00000311943 IL15RAQ13261 267 aa8.97□□□□□ -0.97
SCFD1-201ENST00000311943 ATP6V0BQ99437 205 aa8.97□□□□□ -0.97
SCFD1-201ENST00000311943 PBDC1Q9BVG4 233 aa8.97□□□□□ -0.97
SCFD1-201ENST00000311943 C11orf1Q9H5F2 150 aa8.97□□□□□ -0.97
SCFD1-201ENST00000311943 TECRQ9NZ01 308 aaKnown RBP8.97□□□□□ -0.97
SCFD1-201ENST00000311943 BOLA1Q9Y3E2 137 aa8.97□□□□□ -0.97
SCFD1-201ENST00000311943 RPS10-NUDT3A0A1W2PQS6 291 aa8.97□□□□□ -0.97
SCFD1-201ENST00000311943 H2BFSP57053 126 aa8.97□□□□□ -0.97
SCFD1-201ENST00000311943 DEFB1P60022 68 aa8.97□□□□□ -0.97
SCFD1-201ENST00000311943 LRRC37A5PQ49AS3 106 aa8.97□□□□□ -0.97
SCFD1-201ENST00000311943 TCF24Q7RTU0 167 aa8.97□□□□□ -0.97
SCFD1-201ENST00000311943 GTSCR1Q86UQ5 136 aa8.97□□□□□ -0.97
SCFD1-201ENST00000311943 FAM110AQ9BQ89 295 aa8.97□□□□□ -0.97
SCFD1-201ENST00000311943 MARVELD1Q9BSK0 173 aa8.97□□□□□ -0.97
SCFD1-201ENST00000311943 GAR1Q9NY12 217 aaKnown RBP8.97□□□□□ -0.97
SCFD1-201ENST00000311943 MED6O75586 246 aa8.96□□□□□ -0.98
SCFD1-201ENST00000311943 CST7O76096 145 aa8.96□□□□□ -0.98
SCFD1-201ENST00000311943 IL5P05113 134 aa8.96□□□□□ -0.98
SCFD1-201ENST00000311943 RD3LP0DJH9 198 aa8.96□□□□□ -0.98
SCFD1-201ENST00000311943 SLC25A4P12235 298 aa8.96□□□□□ -0.98
SCFD1-201ENST00000311943 S100A10P60903 97 aa8.96□□□□□ -0.98
SCFD1-201ENST00000311943 RPL11P62913 178 aaKnown RBP8.96□□□□□ -0.98
SCFD1-201ENST00000311943 VSIRQ9H7M9 311 aa8.96□□□□□ -0.98
SCFD1-201ENST00000311943 SRD5A3Q9H8P0 318 aa8.96□□□□□ -0.98
SCFD1-201ENST00000311943 STRAPQ9Y3F4 350 aaKnown RBP8.96□□□□□ -0.98
SCFD1-201ENST00000311943 SMCO3A2RU48 225 aa8.95□□□□□ -0.98
SCFD1-201ENST00000311943 H0YIZ8 118 aa8.95□□□□□ -0.98
SCFD1-201ENST00000311943 TSPAN4O14817 238 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 101.2 ms