RNA–Protein interactions for RNA: ENST00000309469.8

ATG4D-201, Transcript of autophagy related 4D cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4D, Length 1,949 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-201ENST00000309469 OR51G1Q8NGK1 321 aa16.82■□□□□ 0.28
ATG4D-201ENST00000309469 TMEM167BQ9NRX6 74 aa16.82■□□□□ 0.28
ATG4D-201ENST00000309469 EPG5Q9HCE0 2579 aa16.82■□□□□ 0.28
ATG4D-201ENST00000309469 NPIPB5A8MRT5 1133 aa16.82■□□□□ 0.28
ATG4D-201ENST00000309469 MSMBP08118 114 aa16.82■□□□□ 0.28
ATG4D-201ENST00000309469 BPIFB3P59826 476 aa16.82■□□□□ 0.28
ATG4D-201ENST00000309469 UTP20O75691 2785 aaKnown RBP16.82■□□□□ 0.28
ATG4D-201ENST00000309469 IGHV3OR16-10A0A075B7F0 116 aa16.81■□□□□ 0.28
ATG4D-201ENST00000309469 C1orf196B1AJZ1 125 aa16.81■□□□□ 0.28
ATG4D-201ENST00000309469 OR7C2O60412 319 aa16.81■□□□□ 0.28
ATG4D-201ENST00000309469 RAB5BP61020 215 aa16.81■□□□□ 0.28
ATG4D-201ENST00000309469 CLEC12BQ2HXU8 276 aa16.81■□□□□ 0.28
ATG4D-201ENST00000309469 MORN5Q5VZ52 161 aa16.81■□□□□ 0.28
ATG4D-201ENST00000309469 MED13LQ71F56 2210 aa16.81■□□□□ 0.28
ATG4D-201ENST00000309469 K7EIM0 57 aa16.8■□□□□ 0.28
ATG4D-201ENST00000309469 ADIRFQ15847 76 aa16.8■□□□□ 0.28
ATG4D-201ENST00000309469 ZFP82Q8N141 532 aa16.8■□□□□ 0.28
ATG4D-201ENST00000309469 TTC9CQ8N5M4 171 aa16.8■□□□□ 0.28
ATG4D-201ENST00000309469 FAM167A-AS1Q96KT0 104 aa16.8■□□□□ 0.28
ATG4D-201ENST00000309469 GSX1Q9H4S2 264 aaPredicted RBP16.8■□□□□ 0.28
ATG4D-201ENST00000309469 TMEM242Q9NWH2 141 aa16.8■□□□□ 0.28
ATG4D-201ENST00000309469 ELOA3CA0A087WX78 387 aaPredicted RBP16.8■□□□□ 0.28
ATG4D-201ENST00000309469 IGHV7-81A0A0B4J1V7 117 aa16.8■□□□□ 0.28
ATG4D-201ENST00000309469 TRAV5A0A0B4J249 113 aa16.8■□□□□ 0.28
ATG4D-201ENST00000309469 HLA-DRB1P01911 266 aa16.8■□□□□ 0.28
ATG4D-201ENST00000309469 SLC25A16P16260 332 aa16.8■□□□□ 0.28
ATG4D-201ENST00000309469 RASL11BQ9BPW5 248 aa16.8■□□□□ 0.28
ATG4D-201ENST00000309469 SLC25A2Q9BXI2 301 aa16.8■□□□□ 0.28
ATG4D-201ENST00000309469 ARL2-SNX15V9GYD0 113 aa16.8■□□□□ 0.28
ATG4D-201ENST00000309469 NDUFB4O95168 129 aa16.79■□□□□ 0.28
ATG4D-201ENST00000309469 IGLC1P0CG04 106 aa16.79■□□□□ 0.28
ATG4D-201ENST00000309469 ELOBQ15370 118 aa16.79■□□□□ 0.28
ATG4D-201ENST00000309469 KLF17Q5JT82 389 aaPredicted RBP16.79■□□□□ 0.28
ATG4D-201ENST00000309469 ZNF343Q6P1L6 599 aa16.79■□□□□ 0.28
ATG4D-201ENST00000309469 C2CD4CQ8TF44 421 aa16.79■□□□□ 0.28
ATG4D-201ENST00000309469 TRAV40A0A0B4J280 105 aa16.78■□□□□ 0.28
ATG4D-201ENST00000309469 EGR2P11161 476 aaPredicted RBP16.78■□□□□ 0.28
ATG4D-201ENST00000309469 ORM2P19652 201 aa16.78■□□□□ 0.28
ATG4D-201ENST00000309469 RPL23P62829 140 aaKnown RBP16.78■□□□□ 0.28
ATG4D-201ENST00000309469 UHRF2Q96PU4 802 aa16.78■□□□□ 0.28
ATG4D-201ENST00000309469 ZNF355PQ9NSJ1 428 aa16.78■□□□□ 0.28
ATG4D-201ENST00000309469 URGCP-MRPS24S4R325 110 aa16.78■□□□□ 0.28
ATG4D-201ENST00000309469 WNK2Q9Y3S1 2297 aa16.78■□□□□ 0.28
ATG4D-201ENST00000309469 B4DSR2 109 aa16.78■□□□□ 0.28
ATG4D-201ENST00000309469 CLDN34H7C241 214 aa16.78■□□□□ 0.28
ATG4D-201ENST00000309469 BRD3OSQ6XYD6 125 aa16.78■□□□□ 0.28
ATG4D-201ENST00000309469 OR5AU1Q8NGC0 362 aa16.78■□□□□ 0.28
ATG4D-201ENST00000309469 OR1B1Q8NGR6 318 aa16.78■□□□□ 0.28
ATG4D-201ENST00000309469 Q8WTZ3 238 aa16.78■□□□□ 0.28
ATG4D-201ENST00000309469 RBM14Q96PK6 669 aaKnown RBP16.78■□□□□ 0.28
ATG4D-201ENST00000309469 FANCD2OSQ96PS1 177 aa16.78■□□□□ 0.28
ATG4D-201ENST00000309469 CTDSP1Q9GZU7 261 aa16.78■□□□□ 0.28
ATG4D-201ENST00000309469 C7orf69Q9H7B7 122 aa16.78■□□□□ 0.28
ATG4D-201ENST00000309469 IGLV11-55A0A075B6I3 123 aa16.77■□□□□ 0.28
ATG4D-201ENST00000309469 OR10J4P0C629 311 aa16.77■□□□□ 0.28
ATG4D-201ENST00000309469 COL8A1P27658 744 aa16.77■□□□□ 0.28
ATG4D-201ENST00000309469 LINC00305Q7Z4B0 112 aa16.77■□□□□ 0.28
ATG4D-201ENST00000309469 LINC00518Q8N0U6 118 aa16.77■□□□□ 0.28
ATG4D-201ENST00000309469 SCO2A0A1W2PP80 73 aa16.76■□□□□ 0.27
ATG4D-201ENST00000309469 PLP1P60201 277 aa16.76■□□□□ 0.27
ATG4D-201ENST00000309469 HSPB9Q9BQS6 159 aa16.76■□□□□ 0.27
ATG4D-201ENST00000309469 SAV1Q9H4B6 383 aaPredicted RBP16.76■□□□□ 0.27
ATG4D-201ENST00000309469 BIN3Q9NQY0 253 aa16.76■□□□□ 0.27
ATG4D-201ENST00000309469 ABCA2Q9BZC7 2435 aa16.76■□□□□ 0.27
ATG4D-201ENST00000309469 HYPMO75409 117 aa16.76■□□□□ 0.27
ATG4D-201ENST00000309469 IGHV4-38-2P0DP08 117 aa16.76■□□□□ 0.27
ATG4D-201ENST00000309469 TIGITQ495A1 244 aa16.76■□□□□ 0.27
ATG4D-201ENST00000309469 DERL1Q9BUN8 251 aa16.76■□□□□ 0.27
ATG4D-201ENST00000309469 HIF1ANQ9NWT6 349 aa16.76■□□□□ 0.27
ATG4D-201ENST00000309469 A0A0U1RQK1 487 aa16.75■□□□□ 0.27
ATG4D-201ENST00000309469 PSG1P11464 419 aa16.75■□□□□ 0.27
ATG4D-201ENST00000309469 OR5T1Q8NG75 326 aa16.75■□□□□ 0.27
ATG4D-201ENST00000309469 MEGF9Q9H1U4 602 aa16.75■□□□□ 0.27
ATG4D-201ENST00000309469 IGKV1-17P01599 117 aa16.74■□□□□ 0.27
ATG4D-201ENST00000309469 CXCL1P09341 107 aa16.74■□□□□ 0.27
ATG4D-201ENST00000309469 KRTAP10-9P60411 292 aa16.74■□□□□ 0.27
ATG4D-201ENST00000309469 UBE2L3P68036 154 aaKnown RBP16.74■□□□□ 0.27
ATG4D-201ENST00000309469 C11orf52Q96A22 123 aa16.74■□□□□ 0.27
ATG4D-201ENST00000309469 PAXXQ9BUH6 204 aa16.74■□□□□ 0.27
ATG4D-201ENST00000309469 TGIF2-C20orf24A0A0A6YYL0 155 aa16.74■□□□□ 0.27
ATG4D-201ENST00000309469 TRAV20A0A0B4J274 112 aa16.74■□□□□ 0.27
ATG4D-201ENST00000309469 OR51M1Q9H341 326 aa16.74■□□□□ 0.27
ATG4D-201ENST00000309469 A0A1W2PRE2 83 aa16.73■□□□□ 0.27
ATG4D-201ENST00000309469 PYYP10082 97 aa16.73■□□□□ 0.27
ATG4D-201ENST00000309469 RPS10P46783 165 aaKnown RBP16.73■□□□□ 0.27
ATG4D-201ENST00000309469 C16orf82Q7Z2V1 217 aa16.73■□□□□ 0.27
ATG4D-201ENST00000309469 C1QL4Q86Z23 238 aa16.73■□□□□ 0.27
ATG4D-201ENST00000309469 SGMS2Q8NHU3 365 aa16.73■□□□□ 0.27
ATG4D-201ENST00000309469 PIFOQ8TCI5 191 aa16.73■□□□□ 0.27
ATG4D-201ENST00000309469 SSX3Q99909 188 aa16.73■□□□□ 0.27
ATG4D-201ENST00000309469 THYN1Q9P016 225 aa16.73■□□□□ 0.27
ATG4D-201ENST00000309469 FABP1P07148 127 aa16.72■□□□□ 0.27
ATG4D-201ENST00000309469 RD3LP0DJH9 198 aa16.72■□□□□ 0.27
ATG4D-201ENST00000309469 GATA3P23771 443 aa16.72■□□□□ 0.27
ATG4D-201ENST00000309469 STXBP6Q8NFX7 210 aa16.72■□□□□ 0.27
ATG4D-201ENST00000309469 A0A096LNT2 108 aa16.72■□□□□ 0.27
ATG4D-201ENST00000309469 C5orf56Q8N8D9 126 aa16.72■□□□□ 0.27
ATG4D-201ENST00000309469 SPG11Q96JI7 2443 aa16.71■□□□□ 0.27
ATG4D-201ENST00000309469 GGTLC3B5MD39 225 aa16.71■□□□□ 0.27
ATG4D-201ENST00000309469 MFAP4P55083 255 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms