RNA–Protein interactions for RNA: ENST00000306042.9

PTPRE-202, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 1 (best) BASIC

Gene PTPRE, Length 4,957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-202ENST00000306042 PHLDA3Q9Y5J5 127 aa7.49□□□□□ -1.21
PTPRE-202ENST00000306042 SNURFLB1AK76 121 aa7.49□□□□□ -1.21
PTPRE-202ENST00000306042 FGF16O43320 207 aa7.49□□□□□ -1.21
PTPRE-202ENST00000306042 IGHV4-38-2P0DP08 117 aa7.49□□□□□ -1.21
PTPRE-202ENST00000306042 NTF3P20783 257 aa7.49□□□□□ -1.21
PTPRE-202ENST00000306042 TFF3Q07654 80 aa7.49□□□□□ -1.21
PTPRE-202ENST00000306042 KLHDC1Q8N7A1 406 aa7.49□□□□□ -1.21
PTPRE-202ENST00000306042 DUX3Q96PT4 197 aa7.49□□□□□ -1.21
PTPRE-202ENST00000306042 LINC01587Q99440 93 aa7.49□□□□□ -1.21
PTPRE-202ENST00000306042 SAV1Q9H4B6 383 aaPredicted RBP7.49□□□□□ -1.21
PTPRE-202ENST00000306042 F11RQ9Y624 299 aaKnown RBP7.49□□□□□ -1.21
PTPRE-202ENST00000306042 TRAV3A0A0B4J244 114 aa7.49□□□□□ -1.21
PTPRE-202ENST00000306042 MPTX1A8MV57 137 aa7.49□□□□□ -1.21
PTPRE-202ENST00000306042 MMP23AO75900 390 aa7.49□□□□□ -1.21
PTPRE-202ENST00000306042 LHBP01229 141 aa7.49□□□□□ -1.21
PTPRE-202ENST00000306042 BCL2P10415 239 aa7.49□□□□□ -1.21
PTPRE-202ENST00000306042 ATG101Q9BSB4 218 aa7.49□□□□□ -1.21
PTPRE-202ENST00000306042 PSMG3Q9BT73 122 aaPredicted RBP7.49□□□□□ -1.21
PTPRE-202ENST00000306042 CLDN34H7C241 214 aa7.49□□□□□ -1.21
PTPRE-202ENST00000306042 DUSP14O95147 198 aaKnown RBP7.49□□□□□ -1.21
PTPRE-202ENST00000306042 HTN3P15516 51 aa7.49□□□□□ -1.21
PTPRE-202ENST00000306042 FAM74A3Q4VXF1 159 aa7.49□□□□□ -1.21
PTPRE-202ENST00000306042 C9orf62Q8N4C0 152 aa7.49□□□□□ -1.21
PTPRE-202ENST00000306042 SLC50A1Q9BRV3 221 aa7.49□□□□□ -1.21
PTPRE-202ENST00000306042 GOLT1BQ9Y3E0 138 aa7.49□□□□□ -1.21
PTPRE-202ENST00000306042 MED12LQ86YW9 2145 aa7.49□□□□□ -1.21
PTPRE-202ENST00000306042 A0A1B0GWJ7 208 aa7.48□□□□□ -1.21
PTPRE-202ENST00000306042 SYNJ2BPP57105 145 aa7.48□□□□□ -1.21
PTPRE-202ENST00000306042 PNRC1Q12796 327 aaPredicted RBP7.48□□□□□ -1.21
PTPRE-202ENST00000306042 C2orf83Q53S99 150 aa7.48□□□□□ -1.21
PTPRE-202ENST00000306042 SAPCD1Q5SSQ6 148 aa7.48□□□□□ -1.21
PTPRE-202ENST00000306042 OR1N2Q8NGR9 330 aa7.48□□□□□ -1.21
PTPRE-202ENST00000306042 NOL4LQ96MY1 436 aaPredicted RBP7.48□□□□□ -1.21
PTPRE-202ENST00000306042 ZNF833PQ6ZTB9 187 aa7.48□□□□□ -1.21
PTPRE-202ENST00000306042 ABCA2Q9BZC7 2435 aa7.48□□□□□ -1.21
PTPRE-202ENST00000306042 DSCAMO60469 2012 aa7.48□□□□□ -1.21
PTPRE-202ENST00000306042 PRR14LQ5THK1 2151 aa7.48□□□□□ -1.21
PTPRE-202ENST00000306042 EIF3GO75821 320 aaKnown RBP eCLIP7.48□□□□□ -1.21
PTPRE-202ENST00000306042 NDUFB4O95168 129 aa7.48□□□□□ -1.21
PTPRE-202ENST00000306042 ANOS1P23352 680 aa7.48□□□□□ -1.21
PTPRE-202ENST00000306042 SMUG1Q53HV7 270 aa7.48□□□□□ -1.21
PTPRE-202ENST00000306042 LCN12Q6JVE5 192 aa7.48□□□□□ -1.21
PTPRE-202ENST00000306042 TMEM86BQ8N661 226 aa7.48□□□□□ -1.21
PTPRE-202ENST00000306042 SRSF8Q9BRL6 282 aaKnown RBP7.48□□□□□ -1.21
PTPRE-202ENST00000306042 G3V318 75 aa7.48□□□□□ -1.21
PTPRE-202ENST00000306042 PAX1P15863 534 aa7.48□□□□□ -1.21
PTPRE-202ENST00000306042 GCHFRP30047 84 aa7.48□□□□□ -1.21
PTPRE-202ENST00000306042 SULT1A2P50226 295 aa7.48□□□□□ -1.21
PTPRE-202ENST00000306042 RELBQ01201 579 aa7.48□□□□□ -1.21
PTPRE-202ENST00000306042 SGK494Q96LW2 274 aa7.48□□□□□ -1.21
PTPRE-202ENST00000306042 AP1S3Q96PC3 154 aa7.48□□□□□ -1.21
PTPRE-202ENST00000306042 LINC01619G3V211 115 aa7.47□□□□□ -1.21
PTPRE-202ENST00000306042 MEF2BQ02080 365 aaPredicted RBP7.47□□□□□ -1.21
PTPRE-202ENST00000306042 ID3Q02535 119 aa7.47□□□□□ -1.21
PTPRE-202ENST00000306042 KRTAP27-1Q3LI81 207 aa7.47□□□□□ -1.21
PTPRE-202ENST00000306042 PRSS3P2Q8NHM4 247 aa7.47□□□□□ -1.21
PTPRE-202ENST00000306042 C1orf147Q96MC9 270 aaPredicted RBP7.47□□□□□ -1.21
PTPRE-202ENST00000306042 AURKAIP1Q9NWT8 199 aaPredicted RBP7.47□□□□□ -1.21
PTPRE-202ENST00000306042 SELENOKQ9Y6D0 94 aa7.47□□□□□ -1.21
PTPRE-202ENST00000306042 IGKV1-6A0A0C4DH72 117 aa7.47□□□□□ -1.21
PTPRE-202ENST00000306042 CENPVL3A0A0U1RRI6 287 aa7.47□□□□□ -1.21
PTPRE-202ENST00000306042 A8MWL6 223 aa7.47□□□□□ -1.21
PTPRE-202ENST00000306042 OVOL3O00110 214 aa7.47□□□□□ -1.21
PTPRE-202ENST00000306042 TGOLN2O43493 480 aa7.47□□□□□ -1.21
PTPRE-202ENST00000306042 AREGP15514 252 aa7.47□□□□□ -1.21
PTPRE-202ENST00000306042 CNTFRP26992 372 aa7.47□□□□□ -1.21
PTPRE-202ENST00000306042 PSMG4Q5JS54 123 aa7.47□□□□□ -1.21
PTPRE-202ENST00000306042 SIGLEC15Q6ZMC9 328 aa7.47□□□□□ -1.21
PTPRE-202ENST00000306042 LRP4O75096 1905 aa7.47□□□□□ -1.21
PTPRE-202ENST00000306042 PCP4L1A6NKN8 68 aa7.47□□□□□ -1.21
PTPRE-202ENST00000306042 CXCL2P19875 107 aa7.47□□□□□ -1.21
PTPRE-202ENST00000306042 FCER1GP30273 86 aa7.47□□□□□ -1.21
PTPRE-202ENST00000306042 LRTM2Q8N967 370 aa7.47□□□□□ -1.21
PTPRE-202ENST00000306042 OR5AN1Q8NGI8 311 aa7.47□□□□□ -1.21
PTPRE-202ENST00000306042 FAM210BQ96KR6 192 aa7.47□□□□□ -1.21
PTPRE-202ENST00000306042 DNAH12Q6ZR08 3092 aa7.47□□□□□ -1.21
PTPRE-202ENST00000306042 C15orf65H3BRN8 121 aa7.47□□□□□ -1.21
PTPRE-202ENST00000306042 CRYBB3P26998 211 aa7.47□□□□□ -1.21
PTPRE-202ENST00000306042 ZNF462Q96JM2 2506 aa7.46□□□□□ -1.21
PTPRE-202ENST00000306042 IGKV1-5P01602 117 aa7.46□□□□□ -1.21
PTPRE-202ENST00000306042 SRD5A3Q9H8P0 318 aa7.46□□□□□ -1.21
PTPRE-202ENST00000306042 CBY3A6NI87 242 aa7.46□□□□□ -1.22
PTPRE-202ENST00000306042 FCN1O00602 326 aa7.46□□□□□ -1.22
PTPRE-202ENST00000306042 ELANEP08246 267 aa7.46□□□□□ -1.22
PTPRE-202ENST00000306042 C22orf34Q6ZV56 151 aa7.46□□□□□ -1.22
PTPRE-202ENST00000306042 OR11H12B2RN74 326 aa7.46□□□□□ -1.22
PTPRE-202ENST00000306042 RPS20P60866 119 aaKnown RBP7.46□□□□□ -1.22
PTPRE-202ENST00000306042 TWIST1Q15672 202 aa7.46□□□□□ -1.22
PTPRE-202ENST00000306042 MSMPQ1L6U9 139 aa7.46□□□□□ -1.22
PTPRE-202ENST00000306042 LEMD1Q68G75 181 aa7.46□□□□□ -1.22
PTPRE-202ENST00000306042 OR11H6Q8NGC7 330 aa7.46□□□□□ -1.22
PTPRE-202ENST00000306042 GLMPQ8WWB7 406 aa7.46□□□□□ -1.22
PTPRE-202ENST00000306042 DPH3Q96FX2 82 aa7.46□□□□□ -1.22
PTPRE-202ENST00000306042 DAZ1Q9NQZ3 744 aaKnown RBP7.46□□□□□ -1.22
PTPRE-202ENST00000306042 NAV3Q8IVL0 2385 aa7.46□□□□□ -1.22
PTPRE-202ENST00000306042 HSBP1O75506 76 aa7.46□□□□□ -1.22
PTPRE-202ENST00000306042 CFPP27918 469 aa7.46□□□□□ -1.22
PTPRE-202ENST00000306042 WDR73Q6P4I2 378 aa7.46□□□□□ -1.22
PTPRE-202ENST00000306042 TRAPPC1Q9Y5R8 145 aa7.46□□□□□ -1.22
PTPRE-202ENST00000306042 TRGV2A0A075B6R0 118 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms