RNA–Protein interactions for RNA: ENST00000305364.8

TRIM35-201, Transcript of tripartite motif containing 35, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM35, Length 4,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-201ENST00000305364 LINC00305Q7Z4B0 112 aa10.71□□□□□ -0.69
TRIM35-201ENST00000305364 LHFPL4Q7Z7J7 247 aa10.71□□□□□ -0.69
TRIM35-201ENST00000305364 WFDC8Q8IUA0 241 aa10.71□□□□□ -0.69
TRIM35-201ENST00000305364 MUC15Q8N387 334 aa10.71□□□□□ -0.69
TRIM35-201ENST00000305364 SLC25A33Q9BSK2 321 aa10.71□□□□□ -0.69
TRIM35-201ENST00000305364 ZNF430Q9H8G1 570 aaPredicted RBP10.71□□□□□ -0.69
TRIM35-201ENST00000305364 SAA2P0DJI9 122 aaPredicted RBP10.71□□□□□ -0.69
TRIM35-201ENST00000305364 COL8A2P25067 703 aa10.71□□□□□ -0.69
TRIM35-201ENST00000305364 HIST1H1AQ02539 215 aaPredicted RBP10.71□□□□□ -0.69
TRIM35-201ENST00000305364 ANKRD39Q53RE8 183 aa10.71□□□□□ -0.69
TRIM35-201ENST00000305364 STXBP6Q8NFX7 210 aa10.71□□□□□ -0.69
TRIM35-201ENST00000305364 RPP21Q9H633 154 aaKnown RBP10.71□□□□□ -0.69
TRIM35-201ENST00000305364 J3QR89 54 aa10.71□□□□□ -0.7
TRIM35-201ENST00000305364 DLL1O00548 723 aa10.71□□□□□ -0.7
TRIM35-201ENST00000305364 FAM87AP0C7U9 286 aa10.71□□□□□ -0.7
TRIM35-201ENST00000305364 GFRALQ6UXV0 394 aa10.71□□□□□ -0.7
TRIM35-201ENST00000305364 SPG11Q96JI7 2443 aa10.71□□□□□ -0.7
TRIM35-201ENST00000305364 LRP4O75096 1905 aa10.71□□□□□ -0.7
TRIM35-201ENST00000305364 TMSB15BA0A087X1C1 80 aa10.7□□□□□ -0.7
TRIM35-201ENST00000305364 SMIM27A0A1W2PRY6 76 aa10.7□□□□□ -0.7
TRIM35-201ENST00000305364 SCGB2A1O75556 95 aa10.7□□□□□ -0.7
TRIM35-201ENST00000305364 REG1AP05451 166 aa10.7□□□□□ -0.7
TRIM35-201ENST00000305364 LYZP61626 148 aa10.7□□□□□ -0.7
TRIM35-201ENST00000305364 RIGQ13278 110 aa10.7□□□□□ -0.7
TRIM35-201ENST00000305364 OR10W1Q8NGF6 305 aa10.7□□□□□ -0.7
TRIM35-201ENST00000305364 F11RQ9Y624 299 aaKnown RBP10.7□□□□□ -0.7
TRIM35-201ENST00000305364 J3QW42 95 aa10.7□□□□□ -0.7
TRIM35-201ENST00000305364 MOSP00540 346 aa10.7□□□□□ -0.7
TRIM35-201ENST00000305364 APOHP02749 345 aaPredicted RBP10.7□□□□□ -0.7
TRIM35-201ENST00000305364 TMEM11P17152 192 aa10.7□□□□□ -0.7
TRIM35-201ENST00000305364 TP73-AS1Q9UF72 201 aa10.7□□□□□ -0.7
TRIM35-201ENST00000305364 MED13LQ71F56 2210 aa10.7□□□□□ -0.7
TRIM35-201ENST00000305364 TM4SF20Q53R12 229 aa10.7□□□□□ -0.7
TRIM35-201ENST00000305364 HCP5Q6MZN7 132 aa10.7□□□□□ -0.7
TRIM35-201ENST00000305364 TMEM116Q8NCL8 245 aa10.69□□□□□ -0.7
TRIM35-201ENST00000305364 GPR82Q96P67 336 aa10.69□□□□□ -0.7
TRIM35-201ENST00000305364 BRWD1-AS2P59051 145 aa10.69□□□□□ -0.7
TRIM35-201ENST00000305364 RASL11AQ6T310 242 aa10.69□□□□□ -0.7
TRIM35-201ENST00000305364 OR10AG1Q8NH19 301 aa10.69□□□□□ -0.7
TRIM35-201ENST00000305364 SRSF12Q8WXF0 261 aaKnown RBP10.69□□□□□ -0.7
TRIM35-201ENST00000305364 K7EP13 123 aa10.69□□□□□ -0.7
TRIM35-201ENST00000305364 CD177Q8N6Q3 437 aa10.69□□□□□ -0.7
TRIM35-201ENST00000305364 GUCD1Q96NT3 240 aa10.69□□□□□ -0.7
TRIM35-201ENST00000305364 YLPM1P49750 1951 aaKnown RBP10.69□□□□□ -0.7
TRIM35-201ENST00000305364 TOMM40O96008 361 aa10.69□□□□□ -0.7
TRIM35-201ENST00000305364 NBEAP1P0C6P0 100 aa10.69□□□□□ -0.7
TRIM35-201ENST00000305364 TMEM97Q5BJF2 176 aa10.69□□□□□ -0.7
TRIM35-201ENST00000305364 BVES-AS1Q5T3Y7 98 aa10.69□□□□□ -0.7
TRIM35-201ENST00000305364 IDI2-AS1Q9NZ38 188 aa10.69□□□□□ -0.7
TRIM35-201ENST00000305364 THYN1Q9P016 225 aa10.69□□□□□ -0.7
TRIM35-201ENST00000305364 RBP4P02753 201 aa10.68□□□□□ -0.7
TRIM35-201ENST00000305364 FABP2P12104 132 aa10.68□□□□□ -0.7
TRIM35-201ENST00000305364 CCL13Q99616 98 aa10.68□□□□□ -0.7
TRIM35-201ENST00000305364 LSM4Q9Y4Z0 139 aaKnown RBP10.68□□□□□ -0.7
TRIM35-201ENST00000305364 ACACBO00763 2458 aa10.68□□□□□ -0.7
TRIM35-201ENST00000305364 CD5LO43866 347 aa10.68□□□□□ -0.7
TRIM35-201ENST00000305364 P0C879 139 aa10.68□□□□□ -0.7
TRIM35-201ENST00000305364 IGHV1-2P23083 117 aa10.68□□□□□ -0.7
TRIM35-201ENST00000305364 CD69Q07108 199 aa10.68□□□□□ -0.7
TRIM35-201ENST00000305364 SCGB2A2Q13296 93 aa10.68□□□□□ -0.7
TRIM35-201ENST00000305364 LOC105371242A0A075B767 164 aa10.68□□□□□ -0.7
TRIM35-201ENST00000305364 PRB4P10163 310 aaPredicted RBP10.68□□□□□ -0.7
TRIM35-201ENST00000305364 GCSHP23434 173 aa10.68□□□□□ -0.7
TRIM35-201ENST00000305364 RBPMS2Q6ZRY4 209 aaKnown RBP10.68□□□□□ -0.7
TRIM35-201ENST00000305364 CHCHD1Q96BP2 118 aaKnown RBP10.68□□□□□ -0.7
TRIM35-201ENST00000305364 VMA21Q3ZAQ7 101 aa10.67□□□□□ -0.7
TRIM35-201ENST00000305364 ZC2HC1AQ96GY0 325 aa10.67□□□□□ -0.7
TRIM35-201ENST00000305364 EPDR1Q9UM22 224 aa10.67□□□□□ -0.7
TRIM35-201ENST00000305364 FOXA2Q9Y261 457 aaPredicted RBP10.67□□□□□ -0.7
TRIM35-201ENST00000305364 A1L4Q6 167 aa10.67□□□□□ -0.7
TRIM35-201ENST00000305364 AHRRA9YTQ3 701 aa10.67□□□□□ -0.7
TRIM35-201ENST00000305364 SP9P0CG40 484 aa10.67□□□□□ -0.7
TRIM35-201ENST00000305364 PRR20EP86478 221 aa10.67□□□□□ -0.7
TRIM35-201ENST00000305364 PRR20CP86479 221 aa10.67□□□□□ -0.7
TRIM35-201ENST00000305364 PRR20DP86480 221 aa10.67□□□□□ -0.7
TRIM35-201ENST00000305364 PRR20BP86481 221 aa10.67□□□□□ -0.7
TRIM35-201ENST00000305364 PRR20AP86496 221 aa10.67□□□□□ -0.7
TRIM35-201ENST00000305364 PRCDQ00LT1 54 aa10.67□□□□□ -0.7
TRIM35-201ENST00000305364 Q6ZR03 302 aa10.67□□□□□ -0.7
TRIM35-201ENST00000305364 FAM214BQ7L5A3 538 aa10.67□□□□□ -0.7
TRIM35-201ENST00000305364 GCSAMQ8N6F7 178 aa10.67□□□□□ -0.7
TRIM35-201ENST00000305364 ITLN1Q8WWA0 313 aa10.67□□□□□ -0.7
TRIM35-201ENST00000305364 TMUB1Q9BVT8 246 aa10.67□□□□□ -0.7
TRIM35-201ENST00000305364 CDH23Q9H251 3354 aa10.67□□□□□ -0.7
TRIM35-201ENST00000305364 PTPRQQ9UMZ3 2332 aa10.67□□□□□ -0.7
TRIM35-201ENST00000305364 UPK2O00526 184 aa10.67□□□□□ -0.7
TRIM35-201ENST00000305364 PEAR1Q5VY43 1037 aaPredicted RBP10.67□□□□□ -0.7
TRIM35-201ENST00000305364 ATP5L2Q7Z4Y8 100 aa10.67□□□□□ -0.7
TRIM35-201ENST00000305364 KIR3DL3Q8N743 410 aa10.67□□□□□ -0.7
TRIM35-201ENST00000305364 VSTM2AQ8TAG5 236 aa10.67□□□□□ -0.7
TRIM35-201ENST00000305364 SPCS1Q9Y6A9 102 aa10.67□□□□□ -0.7
TRIM35-201ENST00000305364 GOLT1AQ6ZVE7 132 aa10.66□□□□□ -0.7
TRIM35-201ENST00000305364 OR2K2Q8NGT1 345 aa10.66□□□□□ -0.7
TRIM35-201ENST00000305364 GP6Q9HCN6 339 aa10.66□□□□□ -0.7
TRIM35-201ENST00000305364 ABCA4P78363 2273 aa10.66□□□□□ -0.7
TRIM35-201ENST00000305364 SAA1P0DJI8 122 aaPredicted RBP10.66□□□□□ -0.7
TRIM35-201ENST00000305364 LINC00173Q6ZV60 143 aa10.66□□□□□ -0.7
TRIM35-201ENST00000305364 GNG7O60262 68 aa10.66□□□□□ -0.7
TRIM35-201ENST00000305364 PRSS1P07477 247 aa10.66□□□□□ -0.7
TRIM35-201ENST00000305364 CECR9P0C854 216 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms