RNA–Protein interactions for RNA: ENST00000290650.8

UBR1-201, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBR1, Length 7,761 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-201ENST00000290650 HIST1H2BDP58876 126 aa3.94□□□□□ -1.78
UBR1-201ENST00000290650 HIST1H2BCP62807 126 aa3.94□□□□□ -1.78
UBR1-201ENST00000290650 HIST2H2BEQ16778 126 aa3.94□□□□□ -1.78
UBR1-201ENST00000290650 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.94□□□□□ -1.78
UBR1-201ENST00000290650 CLEC19AQ6UXS0 136 aa3.94□□□□□ -1.78
UBR1-201ENST00000290650 ZNF738Q8NE65 137 aa3.94□□□□□ -1.78
UBR1-201ENST00000290650 HIST1H2BHQ93079 126 aa3.94□□□□□ -1.78
UBR1-201ENST00000290650 HIST1H2BNQ99877 126 aa3.94□□□□□ -1.78
UBR1-201ENST00000290650 HIST1H2BMQ99879 126 aa3.94□□□□□ -1.78
UBR1-201ENST00000290650 C15orf61A6NNL5 157 aa3.94□□□□□ -1.78
UBR1-201ENST00000290650 NRN1LQ496H8 165 aa3.94□□□□□ -1.78
UBR1-201ENST00000290650 EXOC3-AS1Q8N2X6 119 aa3.94□□□□□ -1.78
UBR1-201ENST00000290650 CCL19Q99731 98 aa3.94□□□□□ -1.78
UBR1-201ENST00000290650 TMEM208Q9BTX3 173 aa3.94□□□□□ -1.78
UBR1-201ENST00000290650 MCRIP2Q9BUT9 160 aaKnown RBP3.94□□□□□ -1.78
UBR1-201ENST00000290650 CEP295Q9C0D2 2601 aa3.94□□□□□ -1.78
UBR1-201ENST00000290650 S100A7P31151 101 aa3.94□□□□□ -1.78
UBR1-201ENST00000290650 TIMP3P35625 211 aa3.94□□□□□ -1.78
UBR1-201ENST00000290650 SPANXN1Q5VSR9 72 aa3.94□□□□□ -1.78
UBR1-201ENST00000290650 TREML4Q6UXN2 200 aa3.94□□□□□ -1.78
UBR1-201ENST00000290650 OR4B1Q8NGF8 309 aa3.94□□□□□ -1.78
UBR1-201ENST00000290650 OR5R1Q8NH85 324 aa3.94□□□□□ -1.78
UBR1-201ENST00000290650 PLSCR4Q9NRQ2 329 aa3.94□□□□□ -1.78
UBR1-201ENST00000290650 TLN1Q9Y490 2541 aaKnown RBP3.93□□□□□ -1.78
UBR1-201ENST00000290650 TRAV8-1A0A0A6YYK1 113 aa3.93□□□□□ -1.78
UBR1-201ENST00000290650 TIMM23O14925 209 aa3.93□□□□□ -1.78
UBR1-201ENST00000290650 NBEAP1P0C6P0 100 aa3.93□□□□□ -1.78
UBR1-201ENST00000290650 GRNP28799 593 aaKnown RBP3.93□□□□□ -1.78
UBR1-201ENST00000290650 MC5RP33032 325 aa3.93□□□□□ -1.78
UBR1-201ENST00000290650 CDPF1Q6NVV7 123 aa3.93□□□□□ -1.78
UBR1-201ENST00000290650 WDR73Q6P4I2 378 aa3.93□□□□□ -1.78
UBR1-201ENST00000290650 ANKHD1Q8IWZ3 2542 aaKnown RBP3.93□□□□□ -1.78
UBR1-201ENST00000290650 MPDU1O75352 247 aa3.93□□□□□ -1.78
UBR1-201ENST00000290650 FOLR2P14207 255 aa3.93□□□□□ -1.78
UBR1-201ENST00000290650 RELQ04864 619 aaPredicted RBP3.93□□□□□ -1.78
UBR1-201ENST00000290650 CLEC2AQ6UVW9 174 aa3.93□□□□□ -1.78
UBR1-201ENST00000290650 B9A039 149 aa3.93□□□□□ -1.78
UBR1-201ENST00000290650 IGKV1-39P01597 117 aa3.93□□□□□ -1.78
UBR1-201ENST00000290650 IGKV1D-39P04432 117 aa3.93□□□□□ -1.78
UBR1-201ENST00000290650 FAM106CPP0CH98 169 aa3.93□□□□□ -1.78
UBR1-201ENST00000290650 STAG3L2P0CL84 134 aa3.93□□□□□ -1.78
UBR1-201ENST00000290650 NOTCH2Q04721 2471 aa3.93□□□□□ -1.78
UBR1-201ENST00000290650 BRD3OSQ6XYD6 125 aa3.93□□□□□ -1.78
UBR1-201ENST00000290650 CITED1Q99966 193 aa3.93□□□□□ -1.78
UBR1-201ENST00000290650 PSMG3Q9BT73 122 aaPredicted RBP3.93□□□□□ -1.78
UBR1-201ENST00000290650 YTHDF2Q9Y5A9 579 aaKnown RBP3.93□□□□□ -1.78
UBR1-201ENST00000290650 ACACBO00763 2458 aa3.93□□□□□ -1.78
UBR1-201ENST00000290650 TMEM189A5PLL7 270 aa3.93□□□□□ -1.78
UBR1-201ENST00000290650 DPRXA6NFQ7 191 aa3.93□□□□□ -1.78
UBR1-201ENST00000290650 C19orf67A6NJJ6 358 aa3.93□□□□□ -1.78
UBR1-201ENST00000290650 SRRM5B3KS81 715 aa3.93□□□□□ -1.78
UBR1-201ENST00000290650 M0QZ24 198 aa3.93□□□□□ -1.78
UBR1-201ENST00000290650 YPEL1O60688 119 aa3.93□□□□□ -1.78
UBR1-201ENST00000290650 PDLIM4P50479 330 aa3.93□□□□□ -1.78
UBR1-201ENST00000290650 RPL15P61313 204 aaKnown RBP3.93□□□□□ -1.78
UBR1-201ENST00000290650 C1orf162Q8NEQ5 155 aaPredicted RBP3.93□□□□□ -1.78
UBR1-201ENST00000290650 RNASE6Q93091 150 aaKnown RBP3.93□□□□□ -1.78
UBR1-201ENST00000290650 RAB37Q96AX2 223 aa3.93□□□□□ -1.78
UBR1-201ENST00000290650 YPEL2Q96QA6 119 aa3.93□□□□□ -1.78
UBR1-201ENST00000290650 MAP1LC3CQ9BXW4 147 aa3.93□□□□□ -1.78
UBR1-201ENST00000290650 A0A1W2PRX2 142 aa3.93□□□□□ -1.78
UBR1-201ENST00000290650 ISLRO14498 428 aa3.93□□□□□ -1.78
UBR1-201ENST00000290650 RPL13AP40429 203 aaKnown RBP3.93□□□□□ -1.78
UBR1-201ENST00000290650 LURAP1LQ8IV03 231 aa3.93□□□□□ -1.78
UBR1-201ENST00000290650 TMEM186Q96B77 213 aa3.93□□□□□ -1.78
UBR1-201ENST00000290650 TUBA4BQ9H853 241 aa3.93□□□□□ -1.78
UBR1-201ENST00000290650 RPUSD1Q9UJJ7 312 aaKnown RBP3.93□□□□□ -1.78
UBR1-201ENST00000290650 CACNA1AO00555 2505 aa3.93□□□□□ -1.78
UBR1-201ENST00000290650 HIGD1CA8MV81 97 aa3.93□□□□□ -1.78
UBR1-201ENST00000290650 UPK2O00526 184 aa3.93□□□□□ -1.78
UBR1-201ENST00000290650 SIAH2O43255 324 aa3.93□□□□□ -1.78
UBR1-201ENST00000290650 ZNF134P52741 427 aa3.93□□□□□ -1.78
UBR1-201ENST00000290650 KLRB1Q12918 225 aa3.93□□□□□ -1.78
UBR1-201ENST00000290650 FAM74A4Q5TZK3 123 aa3.93□□□□□ -1.78
UBR1-201ENST00000290650 GGTLC1Q9BX51 225 aa3.93□□□□□ -1.78
UBR1-201ENST00000290650 DSCAMO60469 2012 aa3.93□□□□□ -1.78
UBR1-201ENST00000290650 CKS2P33552 79 aa3.92□□□□□ -1.78
UBR1-201ENST00000290650 GPX4P36969 197 aaPredicted RBP3.92□□□□□ -1.78
UBR1-201ENST00000290650 TAS2R60P59551 318 aa3.92□□□□□ -1.78
UBR1-201ENST00000290650 TM4SF20Q53R12 229 aa3.92□□□□□ -1.78
UBR1-201ENST00000290650 OR52E5Q8NH55 327 aa3.92□□□□□ -1.78
UBR1-201ENST00000290650 GAFA1Q96PS6 74 aa3.92□□□□□ -1.78
UBR1-201ENST00000290650 LINC00312Q9Y6C7 94 aa3.92□□□□□ -1.78
UBR1-201ENST00000290650 CHD8Q9HCK8 2581 aa3.92□□□□□ -1.78
UBR1-201ENST00000290650 CFPP27918 469 aa3.92□□□□□ -1.78
UBR1-201ENST00000290650 PAX9P55771 341 aa3.92□□□□□ -1.78
UBR1-201ENST00000290650 LYPD6Q86Y78 171 aa3.92□□□□□ -1.78
UBR1-201ENST00000290650 BPIFA4PQ86YQ2 179 aa3.92□□□□□ -1.78
UBR1-201ENST00000290650 Q9H3A6 140 aa3.92□□□□□ -1.78
UBR1-201ENST00000290650 TPSG1Q9NRR2 321 aa3.92□□□□□ -1.78
UBR1-201ENST00000290650 ANKRD11Q6UB99 2663 aaPredicted RBP3.92□□□□□ -1.78
UBR1-201ENST00000290650 SERF1AO75920 110 aa3.92□□□□□ -1.78
UBR1-201ENST00000290650 SFTPCP11686 197 aa3.92□□□□□ -1.78
UBR1-201ENST00000290650 IL15RAQ13261 267 aa3.92□□□□□ -1.78
UBR1-201ENST00000290650 HEPN1Q6WQI6 88 aa3.92□□□□□ -1.78
UBR1-201ENST00000290650 SCRT1Q9BWW7 348 aa3.92□□□□□ -1.78
UBR1-201ENST00000290650 LSM4Q9Y4Z0 139 aaKnown RBP3.92□□□□□ -1.78
UBR1-201ENST00000290650 C15orf62A8K5M9 175 aa3.92□□□□□ -1.78
UBR1-201ENST00000290650 PEX7O00628 323 aa3.92□□□□□ -1.78
UBR1-201ENST00000290650 STAG3L3P0CL85 134 aa3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms