RNA–Protein interactions for RNA: ENST00000260653.4

SIX3-201, Transcript of SIX homeobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX3, Length 2,523 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX3-201ENST00000260653 PIFOQ8TCI5 191 aa17.67■□□□□ 0.42
SIX3-201ENST00000260653 RASL11BQ9BPW5 248 aa17.67■□□□□ 0.42
SIX3-201ENST00000260653 CCDC168Q8NDH2 2452 aa17.67■□□□□ 0.42
SIX3-201ENST00000260653 TGFAP01135 160 aa17.67■□□□□ 0.42
SIX3-201ENST00000260653 HSPB1P04792 205 aaKnown RBP17.67■□□□□ 0.42
SIX3-201ENST00000260653 SRP19P09132 144 aaKnown RBP17.67■□□□□ 0.42
SIX3-201ENST00000260653 GATAD1Q8WUU5 269 aa17.67■□□□□ 0.42
SIX3-201ENST00000260653 MEGF9Q9H1U4 602 aa17.67■□□□□ 0.42
SIX3-201ENST00000260653 I3L2K1 104 aa17.66■□□□□ 0.42
SIX3-201ENST00000260653 CEBPGP53567 150 aa17.66■□□□□ 0.42
SIX3-201ENST00000260653 KRTAP1-3Q8IUG1 177 aa17.66■□□□□ 0.42
SIX3-201ENST00000260653 TMEM116Q8NCL8 245 aa17.66■□□□□ 0.42
SIX3-201ENST00000260653 TCRBV4S1A1TA0A5B7 111 aa17.65■□□□□ 0.42
SIX3-201ENST00000260653 IFNA1P01562 189 aa17.65■□□□□ 0.42
SIX3-201ENST00000260653 ARL14EPLP0DKL9 152 aa17.65■□□□□ 0.42
SIX3-201ENST00000260653 EGR2P11161 476 aaPredicted RBP17.65■□□□□ 0.42
SIX3-201ENST00000260653 RHOBP62745 196 aa17.65■□□□□ 0.42
SIX3-201ENST00000260653 CYB561D1Q8N8Q1 229 aa17.65■□□□□ 0.42
SIX3-201ENST00000260653 NANPQ8TBE9 248 aa17.65■□□□□ 0.42
SIX3-201ENST00000260653 Q96MF0 132 aa17.65■□□□□ 0.42
SIX3-201ENST00000260653 SH2D7A6NKC9 451 aaPredicted RBP17.65■□□□□ 0.42
SIX3-201ENST00000260653 STAG3L2P0CL84 134 aa17.65■□□□□ 0.42
SIX3-201ENST00000260653 STAG3L3P0CL85 134 aa17.65■□□□□ 0.42
SIX3-201ENST00000260653 PMS2P11Q13670 270 aa17.65■□□□□ 0.42
SIX3-201ENST00000260653 CYB5R2Q6BCY4 276 aa17.65■□□□□ 0.42
SIX3-201ENST00000260653 SLC35E3Q7Z769 313 aa17.65■□□□□ 0.42
SIX3-201ENST00000260653 C22orf15Q8WYQ4 148 aa17.65■□□□□ 0.42
SIX3-201ENST00000260653 SSX3Q99909 188 aa17.65■□□□□ 0.42
SIX3-201ENST00000260653 NKX6-2Q9C056 277 aaPredicted RBP17.65■□□□□ 0.42
SIX3-201ENST00000260653 FAM78BQ5VT40 261 aa17.64■□□□□ 0.41
SIX3-201ENST00000260653 MBD6Q96DN6 1003 aa17.64■□□□□ 0.41
SIX3-201ENST00000260653 VAX2Q9UIW0 290 aa17.64■□□□□ 0.41
SIX3-201ENST00000260653 PRRC2AP48634 2157 aaKnown RBP17.64■□□□□ 0.41
SIX3-201ENST00000260653 NPIPB5A8MRT5 1133 aa17.64■□□□□ 0.41
SIX3-201ENST00000260653 IGHV4-31P0DP07 118 aa17.64■□□□□ 0.41
SIX3-201ENST00000260653 G0S2P27469 103 aa17.64■□□□□ 0.41
SIX3-201ENST00000260653 RBMS3Q6XE24 437 aaKnown RBP17.64■□□□□ 0.41
SIX3-201ENST00000260653 GSX1Q9H4S2 264 aaPredicted RBP17.64■□□□□ 0.41
SIX3-201ENST00000260653 K7EIM0 57 aa17.63■□□□□ 0.41
SIX3-201ENST00000260653 NPBWR1P48145 328 aa17.63■□□□□ 0.41
SIX3-201ENST00000260653 C5orf56Q8N8D9 126 aa17.63■□□□□ 0.41
SIX3-201ENST00000260653 TNFRSF19Q9NS68 423 aa17.63■□□□□ 0.41
SIX3-201ENST00000260653 CHTOPQ9Y3Y2 248 aaKnown RBP17.63■□□□□ 0.41
SIX3-201ENST00000260653 TMEM249Q2WGJ8 235 aa17.63■□□□□ 0.41
SIX3-201ENST00000260653 SOHLH1Q5JUK2 328 aa17.63■□□□□ 0.41
SIX3-201ENST00000260653 MIR17HGQ75NE6 70 aa17.63■□□□□ 0.41
SIX3-201ENST00000260653 TTC9CQ8N5M4 171 aa17.63■□□□□ 0.41
SIX3-201ENST00000260653 TMEM37Q8WXS4 190 aa17.63■□□□□ 0.41
SIX3-201ENST00000260653 ITPR3Q14573 2671 aa17.62■□□□□ 0.41
SIX3-201ENST00000260653 SPNS3Q6ZMD2 512 aa17.62■□□□□ 0.41
SIX3-201ENST00000260653 DOK5Q9P104 306 aa17.62■□□□□ 0.41
SIX3-201ENST00000260653 ITPR2Q14571 2701 aa17.62■□□□□ 0.41
SIX3-201ENST00000260653 A0A1B0GV90 55 aa17.62■□□□□ 0.41
SIX3-201ENST00000260653 PSMB11A5LHX3 300 aa17.62■□□□□ 0.41
SIX3-201ENST00000260653 OR1L6Q8NGR2 347 aa17.62■□□□□ 0.41
SIX3-201ENST00000260653 FANCD2OSQ96PS1 177 aa17.62■□□□□ 0.41
SIX3-201ENST00000260653 MANBALQ9NQG1 85 aa17.62■□□□□ 0.41
SIX3-201ENST00000260653 FUT9Q9Y231 359 aa17.62■□□□□ 0.41
SIX3-201ENST00000260653 UNC79Q9P2D8 2635 aa17.62■□□□□ 0.41
SIX3-201ENST00000260653 ZNF469Q96JG9 3925 aaPredicted RBP17.62■□□□□ 0.41
SIX3-201ENST00000260653 PAGE4O60829 102 aa17.61■□□□□ 0.41
SIX3-201ENST00000260653 PSMB3P49720 205 aa17.61■□□□□ 0.41
SIX3-201ENST00000260653 MEF2BQ02080 365 aaPredicted RBP17.61■□□□□ 0.41
SIX3-201ENST00000260653 OR5T1Q8NG75 326 aa17.61■□□□□ 0.41
SIX3-201ENST00000260653 MOB4Q9Y3A3 225 aa17.61■□□□□ 0.41
SIX3-201ENST00000260653 TEX15Q9BXT5 2789 aa17.61■□□□□ 0.41
SIX3-201ENST00000260653 ATP6V0E1O15342 81 aa17.61■□□□□ 0.41
SIX3-201ENST00000260653 CXorf1O96002 111 aa17.61■□□□□ 0.41
SIX3-201ENST00000260653 CD81P60033 236 aa17.61■□□□□ 0.41
SIX3-201ENST00000260653 SELENOTP62341 195 aa17.61■□□□□ 0.41
SIX3-201ENST00000260653 TRGV9Q99603 122 aa17.61■□□□□ 0.41
SIX3-201ENST00000260653 IGLV11-55A0A075B6I3 123 aa17.6■□□□□ 0.41
SIX3-201ENST00000260653 LINC01548A6NM66 108 aa17.6■□□□□ 0.41
SIX3-201ENST00000260653 H3BUX3 64 aa17.6■□□□□ 0.41
SIX3-201ENST00000260653 J3QLI3 93 aa17.6■□□□□ 0.41
SIX3-201ENST00000260653 OR5G3P0C626 314 aa17.6■□□□□ 0.41
SIX3-201ENST00000260653 LY6EQ16553 131 aa17.6■□□□□ 0.41
SIX3-201ENST00000260653 ECSCRQ19T08 205 aa17.6■□□□□ 0.41
SIX3-201ENST00000260653 PRSS57Q6UWY2 283 aa17.6■□□□□ 0.41
SIX3-201ENST00000260653 OR4X1Q8NH49 305 aa17.6■□□□□ 0.41
SIX3-201ENST00000260653 SGMS2Q8NHU3 365 aa17.6■□□□□ 0.41
SIX3-201ENST00000260653 S4R3C0 116 aa17.6■□□□□ 0.41
SIX3-201ENST00000260653 AMY1AP04745 511 aa17.59■□□□□ 0.41
SIX3-201ENST00000260653 UBE2G2P60604 165 aa17.59■□□□□ 0.41
SIX3-201ENST00000260653 CLRN3Q8NCR9 226 aa17.59■□□□□ 0.41
SIX3-201ENST00000260653 MDFIC2A0A1B0GVS7 189 aa17.59■□□□□ 0.41
SIX3-201ENST00000260653 S100A9P06702 114 aaKnown RBP17.59■□□□□ 0.41
SIX3-201ENST00000260653 IGLC1P0CG04 106 aa17.59■□□□□ 0.41
SIX3-201ENST00000260653 MORN5Q5VZ52 161 aa17.59■□□□□ 0.41
SIX3-201ENST00000260653 TMUB1Q9BVT8 246 aa17.59■□□□□ 0.41
SIX3-201ENST00000260653 C19orf24Q9BVV8 132 aa17.59■□□□□ 0.41
SIX3-201ENST00000260653 DNAJC4Q9NNZ3 241 aa17.58■□□□□ 0.41
SIX3-201ENST00000260653 COX7A2P2O60397 106 aa17.58■□□□□ 0.4
SIX3-201ENST00000260653 GCHFRP30047 84 aa17.58■□□□□ 0.4
SIX3-201ENST00000260653 FAM90A2PQ658T7 463 aa17.58■□□□□ 0.4
SIX3-201ENST00000260653 PATE2Q6UY27 113 aa17.58■□□□□ 0.4
SIX3-201ENST00000260653 PDZD2O15018 2839 aa17.58■□□□□ 0.4
SIX3-201ENST00000260653 TLN2Q9Y4G6 2542 aa17.57■□□□□ 0.4
SIX3-201ENST00000260653 FAM74A7A6NL05 159 aa17.57■□□□□ 0.4
SIX3-201ENST00000260653 FAM74A3Q4VXF1 159 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms