RNA–Protein interactions for RNA: ENST00000257290.9

PDGFRA-201, Transcript of platelet derived growth factor receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFRA, Length 6,576 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-201ENST00000257290 HRKO00198 91 aa5.62□□□□□ -1.51
PDGFRA-201ENST00000257290 NUPR1O60356 82 aa5.62□□□□□ -1.51
PDGFRA-201ENST00000257290 CA6P23280 308 aa5.62□□□□□ -1.51
PDGFRA-201ENST00000257290 ACP7Q6ZNF0 438 aa5.62□□□□□ -1.51
PDGFRA-201ENST00000257290 LINC00527Q9UJ94 153 aa5.62□□□□□ -1.51
PDGFRA-201ENST00000257290 GOLGA4Q13439 2230 aaKnown RBP5.62□□□□□ -1.51
PDGFRA-201ENST00000257290 HIGD1CA8MV81 97 aa5.62□□□□□ -1.51
PDGFRA-201ENST00000257290 CTRLP40313 264 aa5.62□□□□□ -1.51
PDGFRA-201ENST00000257290 TEPPQ6URK8 271 aa5.62□□□□□ -1.51
PDGFRA-201ENST00000257290 STHQ8IWL8 128 aa5.62□□□□□ -1.51
PDGFRA-201ENST00000257290 SCN8AQ9UQD0 1980 aa5.61□□□□□ -1.51
PDGFRA-201ENST00000257290 XGP55808 180 aa5.61□□□□□ -1.51
PDGFRA-201ENST00000257290 SMRP1Q8NCR6 262 aa5.61□□□□□ -1.51
PDGFRA-201ENST00000257290 KIR2DL5BQ8NHK3 375 aa5.61□□□□□ -1.51
PDGFRA-201ENST00000257290 FOXQ1Q9C009 403 aa5.61□□□□□ -1.51
PDGFRA-201ENST00000257290 VSIRQ9H7M9 311 aa5.61□□□□□ -1.51
PDGFRA-201ENST00000257290 PROCRQ9UNN8 238 aa5.61□□□□□ -1.51
PDGFRA-201ENST00000257290 LINC01549A6NIU2 74 aa5.61□□□□□ -1.51
PDGFRA-201ENST00000257290 SPRY1O43609 319 aaPredicted RBP5.61□□□□□ -1.51
PDGFRA-201ENST00000257290 KISS1Q15726 138 aa5.61□□□□□ -1.51
PDGFRA-201ENST00000257290 ZNF721Q8TF20 911 aa5.61□□□□□ -1.51
PDGFRA-201ENST00000257290 RPP25Q9BUL9 199 aaKnown RBP5.61□□□□□ -1.51
PDGFRA-201ENST00000257290 C21orf62Q9NYP8 219 aa5.61□□□□□ -1.51
PDGFRA-201ENST00000257290 B9D1Q9UPM9 204 aa5.61□□□□□ -1.51
PDGFRA-201ENST00000257290 HAPLN4Q86UW8 402 aa5.61□□□□□ -1.51
PDGFRA-201ENST00000257290 GATA3P23771 443 aa5.61□□□□□ -1.51
PDGFRA-201ENST00000257290 Q6ZS52 159 aa5.61□□□□□ -1.51
PDGFRA-201ENST00000257290 IFI27L2Q9H2X8 130 aa5.61□□□□□ -1.51
PDGFRA-201ENST00000257290 RLFQ13129 1914 aa5.61□□□□□ -1.51
PDGFRA-201ENST00000257290 MYMXA0A1B0GTQ4 84 aa5.61□□□□□ -1.51
PDGFRA-201ENST00000257290 DXOO77932 396 aaKnown RBP5.61□□□□□ -1.51
PDGFRA-201ENST00000257290 PMAIP1Q13794 54 aa5.61□□□□□ -1.51
PDGFRA-201ENST00000257290 PAPPA-AS1Q5QFB9 102 aa5.61□□□□□ -1.51
PDGFRA-201ENST00000257290 CCL4L1Q8NHW4 92 aa5.61□□□□□ -1.51
PDGFRA-201ENST00000257290 KISS1RQ969F8 398 aaPredicted RBP5.61□□□□□ -1.51
PDGFRA-201ENST00000257290 CEACAM18A8MTB9 384 aa5.6□□□□□ -1.51
PDGFRA-201ENST00000257290 WISP3O95389 354 aaPredicted RBP5.6□□□□□ -1.51
PDGFRA-201ENST00000257290 SPATA12Q7Z6I5 190 aa5.6□□□□□ -1.51
PDGFRA-201ENST00000257290 ORMDL3Q8N138 153 aa5.6□□□□□ -1.51
PDGFRA-201ENST00000257290 ABHD12Q8N2K0 398 aa5.6□□□□□ -1.51
PDGFRA-201ENST00000257290 ZNF525Q8N782 197 aa5.6□□□□□ -1.51
PDGFRA-201ENST00000257290 A0A1B0GUT8 65 aa5.6□□□□□ -1.51
PDGFRA-201ENST00000257290 GNB1P62873 340 aa5.6□□□□□ -1.51
PDGFRA-201ENST00000257290 TMEM92Q6UXU6 159 aa5.6□□□□□ -1.51
PDGFRA-201ENST00000257290 TMEM230Q96A57 120 aa5.6□□□□□ -1.51
PDGFRA-201ENST00000257290 COQ2Q96H96 371 aa5.6□□□□□ -1.51
PDGFRA-201ENST00000257290 RPP21Q9H633 154 aaKnown RBP5.6□□□□□ -1.51
PDGFRA-201ENST00000257290 TDRD15B5MCY1 1934 aaKnown RBP5.6□□□□□ -1.51
PDGFRA-201ENST00000257290 LOC107984640A0A0U1RRK4 108 aa5.6□□□□□ -1.51
PDGFRA-201ENST00000257290 HAX1O00165 279 aa5.6□□□□□ -1.51
PDGFRA-201ENST00000257290 ZG16O60844 167 aa5.6□□□□□ -1.51
PDGFRA-201ENST00000257290 NDUFA3O95167 84 aa5.6□□□□□ -1.51
PDGFRA-201ENST00000257290 MNX1P50219 401 aaPredicted RBP5.6□□□□□ -1.51
PDGFRA-201ENST00000257290 LGALS9BQ3B8N2 356 aa5.6□□□□□ -1.51
PDGFRA-201ENST00000257290 LGALS9CQ6DKI2 356 aa5.6□□□□□ -1.51
PDGFRA-201ENST00000257290 NEU4Q8WWR8 484 aaPredicted RBP5.6□□□□□ -1.51
PDGFRA-201ENST00000257290 YLPM1P49750 1951 aaKnown RBP5.6□□□□□ -1.51
PDGFRA-201ENST00000257290 TRAV21A0A0B4J279 112 aa5.6□□□□□ -1.51
PDGFRA-201ENST00000257290 IGHV1OR15-9A0A0B4J2B8 117 aa5.6□□□□□ -1.51
PDGFRA-201ENST00000257290 CELA3BP08861 270 aa5.6□□□□□ -1.51
PDGFRA-201ENST00000257290 CNTFRP26992 372 aa5.6□□□□□ -1.51
PDGFRA-201ENST00000257290 C10orf105Q8TEF2 133 aa5.6□□□□□ -1.51
PDGFRA-201ENST00000257290 ZNF501Q96CX3 271 aaPredicted RBP5.6□□□□□ -1.51
PDGFRA-201ENST00000257290 RPS28P62857 69 aaKnown RBP5.59□□□□□ -1.51
PDGFRA-201ENST00000257290 ERHP84090 104 aaKnown RBP5.59□□□□□ -1.51
PDGFRA-201ENST00000257290 RPL18Q07020 188 aaKnown RBP5.59□□□□□ -1.51
PDGFRA-201ENST00000257290 CIRBPQ14011 172 aaKnown RBP5.59□□□□□ -1.51
PDGFRA-201ENST00000257290 FAM53BQ14153 422 aa5.59□□□□□ -1.51
PDGFRA-201ENST00000257290 UFSP1Q6NVU6 142 aa5.59□□□□□ -1.51
PDGFRA-201ENST00000257290 MBD3L2Q8NHZ7 208 aaPredicted RBP5.59□□□□□ -1.51
PDGFRA-201ENST00000257290 PTPRFP10586 1907 aa5.59□□□□□ -1.51
PDGFRA-201ENST00000257290 LMO7DNF2Z398 122 aa5.59□□□□□ -1.51
PDGFRA-201ENST00000257290 SPINT2O43291 252 aa5.59□□□□□ -1.51
PDGFRA-201ENST00000257290 CRIPAKQ8N1N5 446 aa5.59□□□□□ -1.51
PDGFRA-201ENST00000257290 Q8TCH9 128 aa5.59□□□□□ -1.51
PDGFRA-201ENST00000257290 YPEL4Q96NS1 127 aa5.59□□□□□ -1.51
PDGFRA-201ENST00000257290 VKORC1Q9BQB6 163 aa5.59□□□□□ -1.51
PDGFRA-201ENST00000257290 C1RLQ9NZP8 487 aa5.59□□□□□ -1.51
PDGFRA-201ENST00000257290 MYO16Q9Y6X6 1858 aa5.59□□□□□ -1.51
PDGFRA-201ENST00000257290 NPIPB6E9PJ23 425 aa5.59□□□□□ -1.51
PDGFRA-201ENST00000257290 SSR4P51571 173 aa5.59□□□□□ -1.51
PDGFRA-201ENST00000257290 C2orf83Q53S99 150 aa5.59□□□□□ -1.51
PDGFRA-201ENST00000257290 PAQR4Q8N4S7 273 aaPredicted RBP5.59□□□□□ -1.51
PDGFRA-201ENST00000257290 CCL28Q9NRJ3 127 aa5.59□□□□□ -1.51
PDGFRA-201ENST00000257290 IDI2-AS1Q9NZ38 188 aa5.59□□□□□ -1.51
PDGFRA-201ENST00000257290 CASP8AP2Q9UKL3 1982 aa5.59□□□□□ -1.51
PDGFRA-201ENST00000257290 TRAV12-3A0A0B4J271 114 aa5.59□□□□□ -1.51
PDGFRA-201ENST00000257290 CGB1A6NKQ9 187 aa5.59□□□□□ -1.51
PDGFRA-201ENST00000257290 RNASE2P10153 161 aaKnown RBP5.59□□□□□ -1.51
PDGFRA-201ENST00000257290 AAED1Q7RTV5 226 aa5.59□□□□□ -1.51
PDGFRA-201ENST00000257290 RNF138Q8WVD3 245 aa5.59□□□□□ -1.51
PDGFRA-201ENST00000257290 PATE1Q8WXA2 126 aa5.59□□□□□ -1.51
PDGFRA-201ENST00000257290 NPCDR1Q9BY65 106 aa5.59□□□□□ -1.51
PDGFRA-201ENST00000257290 THSD7BQ9C0I4 1608 aa5.59□□□□□ -1.51
PDGFRA-201ENST00000257290 SMIM26A0A096LP01 95 aa5.59□□□□□ -1.52
PDGFRA-201ENST00000257290 ECSCRQ19T08 205 aa5.59□□□□□ -1.52
PDGFRA-201ENST00000257290 LCNL1Q6ZST4 164 aa5.59□□□□□ -1.52
PDGFRA-201ENST00000257290 DYNLRB2Q8TF09 96 aa5.59□□□□□ -1.52
PDGFRA-201ENST00000257290 LSM4Q9Y4Z0 139 aaKnown RBP5.59□□□□□ -1.52
PDGFRA-201ENST00000257290 ORMDL2Q53FV1 153 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms